RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 RGS3P49796 1198 aa7.5□□□□□ -1.21
PTPN20-208ENST00000395727 SNAPC2Q13487 334 aa7.5□□□□□ -1.21
PTPN20-208ENST00000395727 OCLNQ16625 522 aa7.5□□□□□ -1.21
PTPN20-208ENST00000395727 CCL15Q16663 113 aa7.5□□□□□ -1.21
PTPN20-208ENST00000395727 HSP90AB4PQ58FF6 505 aa7.5□□□□□ -1.21
PTPN20-208ENST00000395727 CCDC158Q5M9N0 1113 aa7.5□□□□□ -1.21
PTPN20-208ENST00000395727 GORABQ5T7V8 394 aa7.5□□□□□ -1.21
PTPN20-208ENST00000395727 CERS3Q8IU89 383 aa7.5□□□□□ -1.21
PTPN20-208ENST00000395727 ERC1Q8IUD2 1116 aa7.5□□□□□ -1.21
PTPN20-208ENST00000395727 SCG3Q8WXD2 468 aaKnown RBP7.5□□□□□ -1.21
PTPN20-208ENST00000395727 CLP1Q92989 425 aaKnown RBP7.5□□□□□ -1.21
PTPN20-208ENST00000395727 ZNF775Q96BV0 537 aaPredicted RBP7.5□□□□□ -1.21
PTPN20-208ENST00000395727 ERO1AQ96HE7 468 aa7.5□□□□□ -1.21
PTPN20-208ENST00000395727 NEUROD6Q96NK8 337 aa7.5□□□□□ -1.21
PTPN20-208ENST00000395727 C2orf49Q9BVC5 232 aaPredicted RBP7.5□□□□□ -1.21
PTPN20-208ENST00000395727 R3HDMLQ9H3Y0 253 aa7.5□□□□□ -1.21
PTPN20-208ENST00000395727 ZDHHC3Q9NYG2 299 aa7.5□□□□□ -1.21
PTPN20-208ENST00000395727 ABCF2Q9UG63 623 aa7.5□□□□□ -1.21
PTPN20-208ENST00000395727 DDX19BQ9UMR2 479 aa7.5□□□□□ -1.21
PTPN20-208ENST00000395727 SERTM1A2A2V5 107 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 CCDC85CA6NKD9 419 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 PHF20L1A8MW92 1017 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 TLR2O60603 784 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 CTNND1O60716 968 aaKnown RBP7.49□□□□□ -1.21
PTPN20-208ENST00000395727 SURF6O75683 361 aaKnown RBP7.49□□□□□ -1.21
PTPN20-208ENST00000395727 F11P03951 625 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 ATP4AP20648 1035 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 MSX1P28360 303 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 INPP5BP32019 993 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 BTDP43251 543 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 TCP10Q12799 353 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 NFX1Q12986 1120 aaKnown RBP7.49□□□□□ -1.21
PTPN20-208ENST00000395727 SH3PXD2AQ5TCZ1 1133 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 OTOP1Q7RTM1 612 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 ANKRD23Q86SG2 305 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 RPAP2Q8IXW5 612 aaPredicted RBP7.49□□□□□ -1.21
PTPN20-208ENST00000395727 SCYL3Q8IZE3 742 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 FAM43AQ8N2R8 423 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 C1orf216Q8TAB5 229 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 ZKSCAN4Q969J2 545 aaPredicted RBP7.49□□□□□ -1.21
PTPN20-208ENST00000395727 DBNDD2Q9BQY9 259 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 ZFYVE28Q9HCC9 887 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 ZBTB40Q9NUA8 1239 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 CUEDC1Q9NWM3 386 aaPredicted RBP7.49□□□□□ -1.21
PTPN20-208ENST00000395727 DBNLQ9UJU6 430 aaKnown RBP7.49□□□□□ -1.21
PTPN20-208ENST00000395727 SIPA1L1O43166 1804 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 PHIPQ8WWQ0 1821 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 DDX60LQ5H9U9 1706 aaKnown RBP7.49□□□□□ -1.21
PTPN20-208ENST00000395727 CDK5RAP2Q96SN8 1893 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 ADGRA2Q96PE1 1338 aa7.49□□□□□ -1.21
PTPN20-208ENST00000395727 LOC285556D6RIA3 1793 aa7.48□□□□□ -1.21
PTPN20-208ENST00000395727 PTPRFP10586 1907 aa7.48□□□□□ -1.21
PTPN20-208ENST00000395727 CXCL11O14625 94 aa7.48□□□□□ -1.21
PTPN20-208ENST00000395727 CYP2E1P05181 493 aaPredicted RBP7.48□□□□□ -1.21
PTPN20-208ENST00000395727 TXLNAP40222 546 aa7.48□□□□□ -1.21
PTPN20-208ENST00000395727 SP3Q02447 781 aa7.48□□□□□ -1.21
PTPN20-208ENST00000395727 MLLT1Q03111 559 aaPredicted RBP7.48□□□□□ -1.21
PTPN20-208ENST00000395727 OS9Q13438 667 aaPredicted RBP7.48□□□□□ -1.21
PTPN20-208ENST00000395727 MOGSQ13724 837 aa7.48□□□□□ -1.21
PTPN20-208ENST00000395727 PDE3AQ14432 1141 aa7.48□□□□□ -1.21
PTPN20-208ENST00000395727 ARHGEF6Q15052 776 aa7.48□□□□□ -1.21
PTPN20-208ENST00000395727 TAF1CQ15572 869 aaPredicted RBP7.48□□□□□ -1.21
PTPN20-208ENST00000395727 TTC39AQ5SRH9 613 aa7.48□□□□□ -1.21
PTPN20-208ENST00000395727 PI16Q6UXB8 463 aa7.48□□□□□ -1.21
PTPN20-208ENST00000395727 METTL16Q86W50 562 aaKnown RBP7.48□□□□□ -1.21
PTPN20-208ENST00000395727 ZFPM1Q8IX07 1006 aa7.48□□□□□ -1.21
PTPN20-208ENST00000395727 PANK1Q8TE04 598 aa7.48□□□□□ -1.21
PTPN20-208ENST00000395727 NANOS1Q8WY41 292 aaKnown RBP7.48□□□□□ -1.21
PTPN20-208ENST00000395727 EAF2Q96CJ1 260 aaPredicted RBP7.48□□□□□ -1.21
PTPN20-208ENST00000395727 OSBPL5Q9H0X9 879 aaPredicted RBP7.48□□□□□ -1.21
PTPN20-208ENST00000395727 DHX36Q9H2U1 1008 aaKnown RBP7.48□□□□□ -1.21
PTPN20-208ENST00000395727 DDX4Q9NQI0 724 aaKnown RBP7.48□□□□□ -1.21
PTPN20-208ENST00000395727 HERC5Q9UII4 1024 aaKnown RBP7.48□□□□□ -1.21
PTPN20-208ENST00000395727 USTQ9Y2C2 406 aa7.48□□□□□ -1.21
PTPN20-208ENST00000395727 SLC45A1Q9Y2W3 748 aa7.48□□□□□ -1.21
PTPN20-208ENST00000395727 A0A0G2JLL6 359 aaPredicted RBP7.47□□□□□ -1.21
PTPN20-208ENST00000395727 DDTLA6NHG4 134 aaPredicted RBP7.47□□□□□ -1.21
PTPN20-208ENST00000395727 BTBD19C9JJ37 291 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 PRMT3O60678 531 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 HMMRO75330 724 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 BAG3O95817 575 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 VSIG8P0DPA2 414 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 PTPRAP18433 802 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 PRMT2P55345 433 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 NAA16Q6N069 864 aaPredicted RBP7.47□□□□□ -1.21
PTPN20-208ENST00000395727 MIGA2Q7L4E1 593 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 PRRT2Q7Z6L0 340 aaPredicted RBP7.47□□□□□ -1.21
PTPN20-208ENST00000395727 TRIM22Q8IYM9 498 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.47□□□□□ -1.21
PTPN20-208ENST00000395727 ARMC5Q96C12 935 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 KIF1BPQ96EK5 621 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 PRIMPOLQ96LW4 560 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 GAS2L1Q99501 681 aaPredicted RBP7.47□□□□□ -1.21
PTPN20-208ENST00000395727 CRISPLD1Q9H336 500 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 GINM1Q9NU53 330 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 RAI14Q9P0K7 980 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 LRP2BPQ9P2M1 347 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 RCAN3Q9UKA8 241 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 ZNF232Q9UNY5 417 aa7.47□□□□□ -1.21
PTPN20-208ENST00000395727 PTPN22Q9Y2R2 807 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms