RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 EMILIN2Q9BXX0 1053 aa7.67□□□□□ -1.18
AP3S1-202ENST00000395548 ZC3H12CQ9C0D7 883 aaKnown RBP7.67□□□□□ -1.18
AP3S1-202ENST00000395548 HDAC9Q9UKV0 1011 aa7.67□□□□□ -1.18
AP3S1-202ENST00000395548 PPP1R9AQ9ULJ8 1098 aa7.67□□□□□ -1.18
AP3S1-202ENST00000395548 LTBP3Q9NS15 1303 aa7.67□□□□□ -1.18
AP3S1-202ENST00000395548 GIPC1O14908 333 aa7.66□□□□□ -1.18
AP3S1-202ENST00000395548 HOXA10P31260 410 aaPredicted RBP7.66□□□□□ -1.18
AP3S1-202ENST00000395548 ADMP35318 185 aa7.66□□□□□ -1.18
AP3S1-202ENST00000395548 ID3Q02535 119 aa7.66□□□□□ -1.18
AP3S1-202ENST00000395548 FMR1Q06787 632 aaKnown RBP eCLIP7.66□□□□□ -1.18
AP3S1-202ENST00000395548 KIF4BQ2VIQ3 1234 aa7.66□□□□□ -1.18
AP3S1-202ENST00000395548 FBXO46Q6PJ61 603 aaPredicted RBP7.66□□□□□ -1.18
AP3S1-202ENST00000395548 SNX27Q96L92 541 aa7.66□□□□□ -1.18
AP3S1-202ENST00000395548 TAOK3Q9H2K8 898 aa7.66□□□□□ -1.18
AP3S1-202ENST00000395548 ATXN3LQ9H3M9 355 aa7.66□□□□□ -1.18
AP3S1-202ENST00000395548 PIDD1Q9HB75 910 aa7.66□□□□□ -1.18
AP3S1-202ENST00000395548 SMG6Q86US8 1419 aaKnown RBP7.66□□□□□ -1.18
AP3S1-202ENST00000395548 E9PSI1 815 aa7.65□□□□□ -1.18
AP3S1-202ENST00000395548 TMPRSS2O15393 492 aa7.65□□□□□ -1.18
AP3S1-202ENST00000395548 CYP26A1O43174 497 aa7.65□□□□□ -1.18
AP3S1-202ENST00000395548 INSRP06213 1382 aa7.65□□□□□ -1.18
AP3S1-202ENST00000395548 ARNTP27540 789 aa7.65□□□□□ -1.18
AP3S1-202ENST00000395548 GSTT1P30711 240 aa7.65□□□□□ -1.18
AP3S1-202ENST00000395548 ATP2B2Q01814 1243 aa7.65□□□□□ -1.18
AP3S1-202ENST00000395548 CGNL1Q0VF96 1302 aa7.65□□□□□ -1.18
AP3S1-202ENST00000395548 CCDC88AQ3V6T2 1871 aa7.65□□□□□ -1.18
AP3S1-202ENST00000395548 SULF2Q8IWU5 870 aa7.65□□□□□ -1.18
AP3S1-202ENST00000395548 KCNB2Q92953 911 aa7.65□□□□□ -1.18
AP3S1-202ENST00000395548 CRIM1Q9NZV1 1036 aa7.65□□□□□ -1.18
AP3S1-202ENST00000395548 DAGLAQ9Y4D2 1042 aa7.65□□□□□ -1.18
AP3S1-202ENST00000395548 TTC21AQ8NDW8 1320 aa7.64□□□□□ -1.19
AP3S1-202ENST00000395548 KRTAP9-6A0A140TA67 174 aa7.64□□□□□ -1.19
AP3S1-202ENST00000395548 H0YIN7 160 aa7.64□□□□□ -1.19
AP3S1-202ENST00000395548 ZNF862O60290 1169 aa7.64□□□□□ -1.19
AP3S1-202ENST00000395548 NME2P22392 152 aa7.64□□□□□ -1.19
AP3S1-202ENST00000395548 IRAK1P51617 712 aa7.64□□□□□ -1.19
AP3S1-202ENST00000395548 SHISA5Q8N114 240 aa7.64□□□□□ -1.19
AP3S1-202ENST00000395548 GATA6Q92908 595 aa7.64□□□□□ -1.19
AP3S1-202ENST00000395548 WDR89Q96FK6 387 aaPredicted RBP7.64□□□□□ -1.19
AP3S1-202ENST00000395548 CEP44Q9C0F1 390 aa7.64□□□□□ -1.19
AP3S1-202ENST00000395548 ANGEL1Q9UNK9 670 aaKnown RBP7.64□□□□□ -1.19
AP3S1-202ENST00000395548 SAMM50Q9Y512 469 aa7.64□□□□□ -1.19
AP3S1-202ENST00000395548 DICER1Q9UPY3 1922 aaKnown RBP7.64□□□□□ -1.19
AP3S1-202ENST00000395548 ADAMTSL1Q8N6G6 1762 aa7.64□□□□□ -1.19
AP3S1-202ENST00000395548 ADGRB1O14514 1584 aa7.63□□□□□ -1.19
AP3S1-202ENST00000395548 NFAT5O94916 1531 aa7.63□□□□□ -1.19
AP3S1-202ENST00000395548 FAM170BA6NMN3 283 aa7.63□□□□□ -1.19
AP3S1-202ENST00000395548 CELF2O95319 508 aaKnown RBP7.63□□□□□ -1.19
AP3S1-202ENST00000395548 HSP90B1P14625 803 aaKnown RBP7.63□□□□□ -1.19
AP3S1-202ENST00000395548 MSMPQ1L6U9 139 aa7.63□□□□□ -1.19
AP3S1-202ENST00000395548 SOGA3Q5TF21 947 aa7.63□□□□□ -1.19
AP3S1-202ENST00000395548 SEZ6L2Q6UXD5 910 aa7.63□□□□□ -1.19
AP3S1-202ENST00000395548 PDZD3Q86UT5 571 aa7.63□□□□□ -1.19
AP3S1-202ENST00000395548 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.63□□□□□ -1.19
AP3S1-202ENST00000395548 FANCD2OSQ96PS1 177 aa7.63□□□□□ -1.19
AP3S1-202ENST00000395548 RNF186Q9NXI6 227 aa7.63□□□□□ -1.19
AP3S1-202ENST00000395548 PPM1HQ9ULR3 514 aa7.63□□□□□ -1.19
AP3S1-202ENST00000395548 SPG7Q9UQ90 795 aa7.63□□□□□ -1.19
AP3S1-202ENST00000395548 STXBP5LQ9Y2K9 1186 aa7.63□□□□□ -1.19
AP3S1-202ENST00000395548 OAS3Q9Y6K5 1087 aaKnown RBP7.63□□□□□ -1.19
AP3S1-202ENST00000395548 CACNA1AO00555 2505 aa7.63□□□□□ -1.19
AP3S1-202ENST00000395548 TTC21BQ7Z4L5 1316 aa7.62□□□□□ -1.19
AP3S1-202ENST00000395548 H0YGN5 161 aa7.62□□□□□ -1.19
AP3S1-202ENST00000395548 CDK11BP21127 795 aaKnown RBP7.62□□□□□ -1.19
AP3S1-202ENST00000395548 DDR1Q08345 913 aa7.62□□□□□ -1.19
AP3S1-202ENST00000395548 MCTP1Q6DN14 999 aa7.62□□□□□ -1.19
AP3S1-202ENST00000395548 OGFOD3Q6PK18 319 aa7.62□□□□□ -1.19
AP3S1-202ENST00000395548 C2CD5Q86YS7 1000 aa7.62□□□□□ -1.19
AP3S1-202ENST00000395548 C3orf58Q8NDZ4 430 aa7.62□□□□□ -1.19
AP3S1-202ENST00000395548 ZNF428Q96B54 188 aa7.62□□□□□ -1.19
AP3S1-202ENST00000395548 C1GALT1Q9NS00 363 aa7.62□□□□□ -1.19
AP3S1-202ENST00000395548 RANBP2P49792 3224 aaKnown RBP7.62□□□□□ -1.19
AP3S1-202ENST00000395548 RNF123Q5XPI4 1314 aa7.61□□□□□ -1.19
AP3S1-202ENST00000395548 POLRMTO00411 1230 aaKnown RBP7.61□□□□□ -1.19
AP3S1-202ENST00000395548 ADAMTS4O75173 837 aa7.61□□□□□ -1.19
AP3S1-202ENST00000395548 RPS6KA4O75676 772 aa7.61□□□□□ -1.19
AP3S1-202ENST00000395548 ITGAEP38570 1179 aa7.61□□□□□ -1.19
AP3S1-202ENST00000395548 ITPK1Q13572 414 aa7.61□□□□□ -1.19
AP3S1-202ENST00000395548 CYP27C1Q4G0S4 372 aa7.61□□□□□ -1.19
AP3S1-202ENST00000395548 ZNF765Q7L2R6 523 aa7.61□□□□□ -1.19
AP3S1-202ENST00000395548 SMYD4Q8IYR2 804 aaPredicted RBP7.61□□□□□ -1.19
AP3S1-202ENST00000395548 NECAB3Q96P71 396 aaPredicted RBP7.61□□□□□ -1.19
AP3S1-202ENST00000395548 LGR6Q9HBX8 967 aa7.61□□□□□ -1.19
AP3S1-202ENST00000395548 CBX8Q9HC52 389 aa7.61□□□□□ -1.19
AP3S1-202ENST00000395548 DISC1Q9NRI5 854 aa7.61□□□□□ -1.19
AP3S1-202ENST00000395548 BSDC1Q9NW68 430 aaPredicted RBP7.61□□□□□ -1.19
AP3S1-202ENST00000395548 USP31Q70CQ4 1352 aa7.6□□□□□ -1.19
AP3S1-202ENST00000395548 PCDH11XQ9BZA7 1347 aa7.6□□□□□ -1.19
AP3S1-202ENST00000395548 PCDH11YQ9BZA8 1340 aa7.6□□□□□ -1.19
AP3S1-202ENST00000395548 A0A1W2PPC1 479 aa7.6□□□□□ -1.19
AP3S1-202ENST00000395548 TRAF5O00463 557 aa7.6□□□□□ -1.19
AP3S1-202ENST00000395548 DYNC1LI2O43237 492 aaPredicted RBP7.6□□□□□ -1.19
AP3S1-202ENST00000395548 RNGTTO60942 597 aaKnown RBP7.6□□□□□ -1.19
AP3S1-202ENST00000395548 PRNPP04156 253 aa7.6□□□□□ -1.19
AP3S1-202ENST00000395548 USP50Q70EL3 339 aaPredicted RBP7.6□□□□□ -1.19
AP3S1-202ENST00000395548 VSIG10LQ86VR7 867 aa7.6□□□□□ -1.19
AP3S1-202ENST00000395548 GPC2Q8N158 579 aa7.6□□□□□ -1.19
AP3S1-202ENST00000395548 RAPGEF4Q8WZA2 1011 aa7.6□□□□□ -1.19
AP3S1-202ENST00000395548 PIGBQ92521 554 aa7.6□□□□□ -1.19
AP3S1-202ENST00000395548 FRMD6Q96NE9 622 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms