RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 ANAPC4Q9UJX5 808 aa16.08■□□□□ 0.16
SCAF11-203ENST00000395453 DIS3Q9Y2L1 958 aaKnown RBP16.08■□□□□ 0.16
SCAF11-203ENST00000395453 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.08■□□□□ 0.16
SCAF11-203ENST00000395453 NCOR1O75376 2440 aa16.07■□□□□ 0.16
SCAF11-203ENST00000395453 ATP2A1O14983 1001 aa16.07■□□□□ 0.16
SCAF11-203ENST00000395453 KIAA0355O15063 1070 aa16.07■□□□□ 0.16
SCAF11-203ENST00000395453 TSPY3P0CV98 308 aa16.07■□□□□ 0.16
SCAF11-203ENST00000395453 TSPY8P0CW00 308 aa16.07■□□□□ 0.16
SCAF11-203ENST00000395453 ITGB8P26012 769 aa16.07■□□□□ 0.16
SCAF11-203ENST00000395453 EPHB4P54760 987 aa16.07■□□□□ 0.16
SCAF11-203ENST00000395453 TFAP4Q01664 338 aa16.07■□□□□ 0.16
SCAF11-203ENST00000395453 FPGSQ05932 587 aa16.07■□□□□ 0.16
SCAF11-203ENST00000395453 ZNF792Q3KQV3 632 aa16.07■□□□□ 0.16
SCAF11-203ENST00000395453 FAM47AQ5JRC9 791 aa16.07■□□□□ 0.16
SCAF11-203ENST00000395453 ATXN2LQ8WWM7 1075 aaKnown RBP16.07■□□□□ 0.16
SCAF11-203ENST00000395453 MMP19Q99542 508 aa16.07■□□□□ 0.16
SCAF11-203ENST00000395453 RWDD1Q9H446 243 aaPredicted RBP16.07■□□□□ 0.16
SCAF11-203ENST00000395453 ZNF576Q9H609 170 aa16.07■□□□□ 0.16
SCAF11-203ENST00000395453 PHF24Q9UPV7 400 aa16.07■□□□□ 0.16
SCAF11-203ENST00000395453 FGRP09769 529 aa16.06■□□□□ 0.16
SCAF11-203ENST00000395453 PRAMEF19Q5SWL8 479 aa16.06■□□□□ 0.16
SCAF11-203ENST00000395453 VPS53Q5VIR6 699 aa16.06■□□□□ 0.16
SCAF11-203ENST00000395453 TEX13BQ9BXU2 312 aa16.06■□□□□ 0.16
SCAF11-203ENST00000395453 LNPKQ9C0E8 428 aa16.06■□□□□ 0.16
SCAF11-203ENST00000395453 NRBP1Q9UHY1 535 aa16.06■□□□□ 0.16
SCAF11-203ENST00000395453 FEM1BQ9UK73 627 aa16.06■□□□□ 0.16
SCAF11-203ENST00000395453 IGHDP01880 384 aa16.05■□□□□ 0.16
SCAF11-203ENST00000395453 PGK2P07205 417 aa16.05■□□□□ 0.16
SCAF11-203ENST00000395453 RARBP10826 455 aa16.05■□□□□ 0.16
SCAF11-203ENST00000395453 CTDSPL2Q05D32 466 aa16.05■□□□□ 0.16
SCAF11-203ENST00000395453 MCMDC2Q4G0Z9 681 aa16.05■□□□□ 0.16
SCAF11-203ENST00000395453 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.05■□□□□ 0.16
SCAF11-203ENST00000395453 RNF180Q86T96 592 aa16.05■□□□□ 0.16
SCAF11-203ENST00000395453 TIFAQ96CG3 184 aa16.05■□□□□ 0.16
SCAF11-203ENST00000395453 FAM227BQ96M60 508 aa16.05■□□□□ 0.16
SCAF11-203ENST00000395453 GAS2L1Q99501 681 aaPredicted RBP16.05■□□□□ 0.16
SCAF11-203ENST00000395453 SLC38A10Q9HBR0 1119 aa16.05■□□□□ 0.16
SCAF11-203ENST00000395453 XPNPEP3Q9NQH7 507 aa16.05■□□□□ 0.16
SCAF11-203ENST00000395453 INCENPQ9NQS7 918 aa16.05■□□□□ 0.16
SCAF11-203ENST00000395453 IL17RBQ9NRM6 502 aa16.05■□□□□ 0.16
SCAF11-203ENST00000395453 TMEM39AQ9NV64 488 aa16.05■□□□□ 0.16
SCAF11-203ENST00000395453 RIPK3Q9Y572 518 aa16.05■□□□□ 0.16
SCAF11-203ENST00000395453 SMCHD1A6NHR9 2005 aa16.05■□□□□ 0.16
SCAF11-203ENST00000395453 PLXNA1Q9UIW2 1896 aa16.04■□□□□ 0.16
SCAF11-203ENST00000395453 DNAJC25-GNG10A0A024R161 153 aa16.04■□□□□ 0.16
SCAF11-203ENST00000395453 A0A0D9SFI3 127 aa16.04■□□□□ 0.16
SCAF11-203ENST00000395453 PQBP1O60828 265 aaKnown RBP16.04■□□□□ 0.16
SCAF11-203ENST00000395453 ZBED4O75132 1171 aa16.04■□□□□ 0.16
SCAF11-203ENST00000395453 FGAP02671 866 aa16.04■□□□□ 0.16
SCAF11-203ENST00000395453 NOVP48745 357 aa16.04■□□□□ 0.16
SCAF11-203ENST00000395453 NUCB1Q02818 461 aa16.04■□□□□ 0.16
SCAF11-203ENST00000395453 KCTD2Q14681 263 aa16.04■□□□□ 0.16
SCAF11-203ENST00000395453 PPP4R3BQ5MIZ7 849 aa16.04■□□□□ 0.16
SCAF11-203ENST00000395453 SLFN13Q68D06 897 aa16.04■□□□□ 0.16
SCAF11-203ENST00000395453 SNRNP48Q6IEG0 339 aaKnown RBP16.04■□□□□ 0.16
SCAF11-203ENST00000395453 LRRC47Q8N1G4 583 aaKnown RBP16.04■□□□□ 0.16
SCAF11-203ENST00000395453 EXOC6Q8TAG9 804 aa16.04■□□□□ 0.16
SCAF11-203ENST00000395453 TINF2Q9BSI4 451 aa16.04■□□□□ 0.16
SCAF11-203ENST00000395453 OSBPL3Q9H4L5 887 aa16.04■□□□□ 0.16
SCAF11-203ENST00000395453 RAPGEFL1Q9UHV5 662 aa16.04■□□□□ 0.16
SCAF11-203ENST00000395453 ORC4O43929 436 aa16.03■□□□□ 0.16
SCAF11-203ENST00000395453 FDX1P10109 184 aa16.03■□□□□ 0.16
SCAF11-203ENST00000395453 BMP3P12645 472 aa16.03■□□□□ 0.16
SCAF11-203ENST00000395453 PLA2G5P39877 138 aa16.03■□□□□ 0.16
SCAF11-203ENST00000395453 CHD1LQ86WJ1 897 aa16.03■□□□□ 0.16
SCAF11-203ENST00000395453 PLEKHM2Q8IWE5 1019 aa16.03■□□□□ 0.16
SCAF11-203ENST00000395453 KIFC2Q96AC6 838 aa16.03■□□□□ 0.16
SCAF11-203ENST00000395453 GMCL1Q96IK5 515 aa16.03■□□□□ 0.16
SCAF11-203ENST00000395453 ASB2Q96Q27 587 aa16.03■□□□□ 0.16
SCAF11-203ENST00000395453 THEGQ9P2T0 379 aa16.03■□□□□ 0.16
SCAF11-203ENST00000395453 MYO9BQ13459 2157 aa16.03■□□□□ 0.16
SCAF11-203ENST00000395453 A0A1W2PQ45 241 aaPredicted RBP16.02■□□□□ 0.16
SCAF11-203ENST00000395453 A0A1W2PQY0 241 aa16.02■□□□□ 0.16
SCAF11-203ENST00000395453 DCDC2CA8MYV0 355 aa16.02■□□□□ 0.16
SCAF11-203ENST00000395453 PLA2G6O60733 806 aa16.02■□□□□ 0.16
SCAF11-203ENST00000395453 HSPD1P10809 573 aaKnown RBP16.02■□□□□ 0.16
SCAF11-203ENST00000395453 OAZ1P54368 228 aa16.02■□□□□ 0.16
SCAF11-203ENST00000395453 AKNAD1Q5T1N1 836 aa16.02■□□□□ 0.16
SCAF11-203ENST00000395453 B4GALNT3Q6L9W6 998 aa16.02■□□□□ 0.16
SCAF11-203ENST00000395453 MSL3Q8N5Y2 521 aaKnown RBP16.02■□□□□ 0.16
SCAF11-203ENST00000395453 PPM1EQ8WY54 764 aa16.02■□□□□ 0.16
SCAF11-203ENST00000395453 FAM122AQ96E09 287 aa16.02■□□□□ 0.16
SCAF11-203ENST00000395453 TOX2Q96NM4 488 aa16.02■□□□□ 0.16
SCAF11-203ENST00000395453 ZMYM6O95789 1325 aa16.02■□□□□ 0.15
SCAF11-203ENST00000395453 TSPY2A6NKD2 308 aa16.01■□□□□ 0.15
SCAF11-203ENST00000395453 TMEM232C9JQI7 657 aa16.01■□□□□ 0.15
SCAF11-203ENST00000395453 PGK1P00558 417 aa16.01■□□□□ 0.15
SCAF11-203ENST00000395453 ZNF865P0CJ78 1059 aaPredicted RBP16.01■□□□□ 0.15
SCAF11-203ENST00000395453 MRPS5P82675 430 aaKnown RBP16.01■□□□□ 0.15
SCAF11-203ENST00000395453 NMIQ13287 307 aaPredicted RBP16.01■□□□□ 0.15
SCAF11-203ENST00000395453 CCDC174Q6PII3 467 aa16.01■□□□□ 0.15
SCAF11-203ENST00000395453 MAMDC4Q6UXC1 1216 aa16.01■□□□□ 0.15
SCAF11-203ENST00000395453 ANKRD33Q7Z3H0 272 aa16.01■□□□□ 0.15
SCAF11-203ENST00000395453 ZNF589Q86UQ0 364 aaPredicted RBP16.01■□□□□ 0.15
SCAF11-203ENST00000395453 CPXCR1Q8N123 301 aa16.01■□□□□ 0.15
SCAF11-203ENST00000395453 ADAMTS19Q8TE59 1207 aa16.01■□□□□ 0.15
SCAF11-203ENST00000395453 CHURC1Q8WUH1 139 aa16.01■□□□□ 0.15
SCAF11-203ENST00000395453 RAVER2Q9HCJ3 691 aaKnown RBP16.01■□□□□ 0.15
SCAF11-203ENST00000395453 BDP1A6H8Y1 2624 aa16.01■□□□□ 0.15
SCAF11-203ENST00000395453 TRIM6-TRIM34B2RNG4 842 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms