RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 ZNF543Q08ER8 600 aa10.03□□□□□ -0.8
APLF-202ENST00000394342 GPATCH4Q5T3I0 446 aaKnown RBP10.03□□□□□ -0.8
APLF-202ENST00000394342 IFIT1BQ5T764 474 aaKnown RBP10.03□□□□□ -0.8
APLF-202ENST00000394342 MAP3K21Q5TCX8 1036 aa10.03□□□□□ -0.8
APLF-202ENST00000394342 CYB5R4Q7L1T6 521 aa10.03□□□□□ -0.8
APLF-202ENST00000394342 RASGRP2Q7LDG7 609 aa10.03□□□□□ -0.8
APLF-202ENST00000394342 DPP9Q86TI2 863 aa10.03□□□□□ -0.8
APLF-202ENST00000394342 PNMA1Q8ND90 353 aa10.03□□□□□ -0.8
APLF-202ENST00000394342 RNF208Q9H0X6 261 aa10.03□□□□□ -0.8
APLF-202ENST00000394342 UNC93B1Q9H1C4 597 aa10.03□□□□□ -0.8
APLF-202ENST00000394342 KAT14Q9H8E8 782 aa10.03□□□□□ -0.8
APLF-202ENST00000394342 ANO2Q9NQ90 1003 aa10.03□□□□□ -0.8
APLF-202ENST00000394342 PAK6Q9NQU5 681 aaPredicted RBP10.03□□□□□ -0.8
APLF-202ENST00000394342 PRR12Q9ULL5 1215 aa10.03□□□□□ -0.8
APLF-202ENST00000394342 MTMR7Q9Y216 660 aa10.03□□□□□ -0.8
APLF-202ENST00000394342 SLC27A2O14975 620 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 EN2P19622 333 aaPredicted RBP10.02□□□□□ -0.81
APLF-202ENST00000394342 GJA8P48165 433 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 KCTD2Q14681 263 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 SART3Q15020 963 aaKnown RBP10.02□□□□□ -0.81
APLF-202ENST00000394342 NECTIN1Q15223 517 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 SEC23AQ15436 765 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 CCL14Q16627 93 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 TKFCQ3LXA3 575 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 ASPRV1Q53RT3 343 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 SYDE2Q5VT97 1194 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 MFSD14CQ5VZR4 134 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 OLFML2BQ68BL8 750 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 CREB3L3Q68CJ9 461 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 STOX1Q6ZVD7 989 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 MB21D2Q8IYB1 491 aaPredicted RBP10.02□□□□□ -0.81
APLF-202ENST00000394342 CPXCR1Q8N123 301 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 CHST13Q8NET6 341 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 NPLOC4Q8TAT6 608 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 CHMP4CQ96CF2 233 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.02□□□□□ -0.81
APLF-202ENST00000394342 RANBP17Q9H2T7 1088 aaKnown RBP10.02□□□□□ -0.81
APLF-202ENST00000394342 RAVER2Q9HCJ3 691 aaKnown RBP10.02□□□□□ -0.81
APLF-202ENST00000394342 HMX1Q9NP08 348 aaPredicted RBP10.02□□□□□ -0.81
APLF-202ENST00000394342 FBXO40Q9UH90 709 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 TAF6LQ9Y6J9 622 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 FRMPD2Q68DX3 1309 aaPredicted RBP10.02□□□□□ -0.81
APLF-202ENST00000394342 RPTORQ8N122 1335 aa10.02□□□□□ -0.81
APLF-202ENST00000394342 ERICH2A1L162 156 aa10.01□□□□□ -0.81
APLF-202ENST00000394342 COBLO75128 1261 aa10.01□□□□□ -0.81
APLF-202ENST00000394342 IGHA2P01877 340 aa10.01□□□□□ -0.81
APLF-202ENST00000394342 CACNB2Q08289 660 aaPredicted RBP10.01□□□□□ -0.81
APLF-202ENST00000394342 TRIM32Q13049 653 aa10.01□□□□□ -0.81
APLF-202ENST00000394342 RNF20Q5VTR2 975 aa10.01□□□□□ -0.81
APLF-202ENST00000394342 TTBK2Q6IQ55 1244 aa10.01□□□□□ -0.81
APLF-202ENST00000394342 SHISA4Q96DD7 197 aa10.01□□□□□ -0.81
APLF-202ENST00000394342 MTA3Q9BTC8 594 aa10.01□□□□□ -0.81
APLF-202ENST00000394342 GPCPD1Q9NPB8 672 aa10.01□□□□□ -0.81
APLF-202ENST00000394342 FLRT1Q9NZU1 646 aa10.01□□□□□ -0.81
APLF-202ENST00000394342 PNMA2Q9UL42 364 aa10.01□□□□□ -0.81
APLF-202ENST00000394342 DIS3Q9Y2L1 958 aaKnown RBP10.01□□□□□ -0.81
APLF-202ENST00000394342 RIPK3Q9Y572 518 aa10.01□□□□□ -0.81
APLF-202ENST00000394342 ZNF536O15090 1300 aa10.01□□□□□ -0.81
APLF-202ENST00000394342 KAT6AQ92794 2004 aa10□□□□□ -0.81
APLF-202ENST00000394342 IFIT3O14879 490 aaKnown RBP10□□□□□ -0.81
APLF-202ENST00000394342 SGPL1O95470 568 aa10□□□□□ -0.81
APLF-202ENST00000394342 ICAM1P05362 532 aa10□□□□□ -0.81
APLF-202ENST00000394342 PARP1P09874 1014 aaKnown RBP10□□□□□ -0.81
APLF-202ENST00000394342 MCM5P33992 734 aa10□□□□□ -0.81
APLF-202ENST00000394342 SLC16A2P36021 539 aa10□□□□□ -0.81
APLF-202ENST00000394342 WTAPQ15007 396 aa10□□□□□ -0.81
APLF-202ENST00000394342 ZNF792Q3KQV3 632 aa10□□□□□ -0.81
APLF-202ENST00000394342 CCDC174Q6PII3 467 aa10□□□□□ -0.81
APLF-202ENST00000394342 U2AF1L4Q8WU68 220 aaKnown RBP10□□□□□ -0.81
APLF-202ENST00000394342 MAML3Q96JK9 1138 aa10□□□□□ -0.81
APLF-202ENST00000394342 AGBL1Q96MI9 1066 aa10□□□□□ -0.81
APLF-202ENST00000394342 DEFB118Q96PH6 123 aa10□□□□□ -0.81
APLF-202ENST00000394342 CRISPLD2Q9H0B8 497 aa10□□□□□ -0.81
APLF-202ENST00000394342 ACAD9Q9H845 621 aa10□□□□□ -0.81
APLF-202ENST00000394342 RNF146Q9NTX7 359 aa10□□□□□ -0.81
APLF-202ENST00000394342 WDR19Q8NEZ3 1342 aa10□□□□□ -0.81
APLF-202ENST00000394342 DNAJC25-GNG10A0A024R161 153 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 PGK2P07205 417 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 ALAS1P13196 640 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 SLC4A3P48751 1232 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 ANTXR2P58335 489 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 SNAP25P60880 206 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 TSGA10IPQ3SY00 556 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 TMEM67Q5HYA8 995 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 ZNF467Q7Z7K2 595 aaPredicted RBP9.99□□□□□ -0.81
APLF-202ENST00000394342 ANKRD35Q8N283 1001 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 MSL3Q8N5Y2 521 aaKnown RBP9.99□□□□□ -0.81
APLF-202ENST00000394342 ANKLE1Q8NAG6 615 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 DDX11Q96FC9 970 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 TMEM87BQ96K49 555 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 TRERF1Q96PN7 1200 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 HOMER2Q9NSB8 354 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 NRBP1Q9UHY1 535 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 CCPG1Q9ULG6 757 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 DOCK5Q9H7D0 1870 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 PFASO15067 1338 aa9.99□□□□□ -0.81
APLF-202ENST00000394342 WDR81Q562E7 1941 aa9.98□□□□□ -0.81
APLF-202ENST00000394342 EPB41L2O43491 1005 aaKnown RBP9.98□□□□□ -0.81
APLF-202ENST00000394342 PRC1O43663 620 aa9.98□□□□□ -0.81
APLF-202ENST00000394342 MSCO60682 206 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms