RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 BLIDQ8IZY5 108 aa9.52□□□□□ -0.88
GABRA1-202ENST00000393943 RAB3IPQ96QF0 476 aaPredicted RBP9.52□□□□□ -0.88
GABRA1-202ENST00000393943 RIC8AQ9NPQ8 531 aa9.52□□□□□ -0.88
GABRA1-202ENST00000393943 HPCAL4Q9UM19 191 aa9.52□□□□□ -0.88
GABRA1-202ENST00000393943 CETN3O15182 167 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 CTDSPL2Q05D32 466 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 TSNAXIP1Q2TAA8 658 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 RRAGAQ7L523 313 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 CCDC197Q8NCU1 140 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 CNOT6LQ96LI5 555 aaKnown RBP9.52□□□□□ -0.89
GABRA1-202ENST00000393943 CAPN11Q9UMQ6 739 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 PLEKHG2Q9H7P9 1386 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 TNKSO95271 1327 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 FAM237AA0A1B0GTK4 181 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 TRAF5O00463 557 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 MEFVO15553 781 aaPredicted RBP9.52□□□□□ -0.89
GABRA1-202ENST00000393943 TBCAO75347 108 aaKnown RBP9.52□□□□□ -0.89
GABRA1-202ENST00000393943 ZKSCAN8Q15776 578 aaPredicted RBP9.52□□□□□ -0.89
GABRA1-202ENST00000393943 PARP10Q53GL7 1025 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 TCERG1LQ5VWI1 586 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 NKIRAS1Q9NYS0 192 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.52□□□□□ -0.89
GABRA1-202ENST00000393943 COL15A1P39059 1388 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 CCDC188H7C350 402 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 ENC1O14682 589 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 TRIM66O15016 1216 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 HEXIM1O94992 359 aaKnown RBP9.52□□□□□ -0.89
GABRA1-202ENST00000393943 SSR1P43307 286 aaKnown RBP9.52□□□□□ -0.89
GABRA1-202ENST00000393943 RASSF2P50749 326 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 TBX2Q13207 712 aaPredicted RBP9.52□□□□□ -0.89
GABRA1-202ENST00000393943 LRCH2Q5VUJ6 765 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 GBP7Q8N8V2 638 aaPredicted RBP9.52□□□□□ -0.89
GABRA1-202ENST00000393943 ZKSCAN3Q9BRR0 538 aa9.52□□□□□ -0.89
GABRA1-202ENST00000393943 MRPL44Q9H9J2 332 aaKnown RBP9.52□□□□□ -0.89
GABRA1-202ENST00000393943 PPANQ9NQ55 473 aaKnown RBP9.52□□□□□ -0.89
GABRA1-202ENST00000393943 FBXO2Q9UK22 296 aaPredicted RBP9.52□□□□□ -0.89
GABRA1-202ENST00000393943 SALL1Q9NSC2 1324 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 VIMP08670 466 aaKnown RBP9.51□□□□□ -0.89
GABRA1-202ENST00000393943 FDPSP14324 419 aaKnown RBP9.51□□□□□ -0.89
GABRA1-202ENST00000393943 AARSP49588 968 aaKnown RBP eCLIP9.51□□□□□ -0.89
GABRA1-202ENST00000393943 LRRC24Q50LG9 513 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 ZFYVE27Q5T4F4 411 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 SEL1L2Q5TEA6 688 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 DENND2CQ68D51 928 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 UBL4BQ8N7F7 174 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 GDAP1L1Q96MZ0 367 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 CEP104O60308 925 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 ATP1A2P50993 1020 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 GUCY2DQ02846 1103 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 ORC2Q13416 577 aaPredicted RBP9.51□□□□□ -0.89
GABRA1-202ENST00000393943 KCNB1Q14721 858 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 SEPT2Q15019 361 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 CCNI2Q6ZMN8 369 aaPredicted RBP9.51□□□□□ -0.89
GABRA1-202ENST00000393943 INTS8Q75QN2 995 aaKnown RBP9.51□□□□□ -0.89
GABRA1-202ENST00000393943 MMGT1Q8N4V1 131 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 STAG1Q8WVM7 1258 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 VCXQ9H320 206 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 SH3GLB2Q9NR46 395 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 MAPK8IP1Q9UQF2 711 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 PCDHB6Q9Y5E3 794 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 KIF28PB7ZC32 967 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 ZBTB22O15209 634 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 IFT88Q13099 833 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 CTNNBL1Q8WYA6 563 aaPredicted RBP9.51□□□□□ -0.89
GABRA1-202ENST00000393943 NT5C3AQ9H0P0 336 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 ARPP21Q9UBL0 812 aaPredicted RBP9.51□□□□□ -0.89
GABRA1-202ENST00000393943 KDM3AQ9Y4C1 1321 aa9.51□□□□□ -0.89
GABRA1-202ENST00000393943 HSPA6P17066 643 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 IBSPP21815 317 aaPredicted RBP9.5□□□□□ -0.89
GABRA1-202ENST00000393943 CCDC6Q16204 474 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 TTLL7Q6ZT98 887 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 PEX26Q7Z412 305 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 CALR3Q96L12 384 aaKnown RBP9.5□□□□□ -0.89
GABRA1-202ENST00000393943 EHMT1Q9H9B1 1298 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 FAM53CQ9NYF3 392 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 STK17AQ9UEE5 414 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 PCDHA13Q9Y5I0 950 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 UBN2Q6ZU65 1347 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 KRT13P13646 458 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 PLCG2P16885 1265 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 CTSWP56202 376 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 PSMD2Q13200 908 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 ARHGAP27Q6ZUM4 889 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 MAIP1Q8WWC4 291 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 CALUO43852 315 aaPredicted RBP9.5□□□□□ -0.89
GABRA1-202ENST00000393943 PDE8BO95263 885 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 PRLRP16471 622 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 LRRC63Q05C16 580 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 C2orf54Q08AI8 447 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 NT5DC1Q5TFE4 455 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 LRIG3Q6UXM1 1119 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 CCDC63Q8NA47 563 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 PPFIBP2Q8ND30 876 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 ZNF512BQ96KM6 892 aaPredicted RBP9.5□□□□□ -0.89
GABRA1-202ENST00000393943 PUS7LQ9H0K6 701 aaKnown RBP9.5□□□□□ -0.89
GABRA1-202ENST00000393943 BAIAP2L1Q9UHR4 511 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 DIS3Q9Y2L1 958 aaKnown RBP9.5□□□□□ -0.89
GABRA1-202ENST00000393943 A0A1W2PRG0 241 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 B4DLN1 442 aa9.5□□□□□ -0.89
GABRA1-202ENST00000393943 RGS16O15492 202 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms