RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 ATP8B1O43520 1251 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 ATP2B4P23634 1241 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 EARS2Q5JPH6 523 aaKnown RBP12.19□□□□□ -0.46
BRF1-204ENST00000392557 PROM2Q8N271 834 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 PNMA1Q8ND90 353 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 TBC1D16Q8TBP0 767 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 KIFC2Q96AC6 838 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 PAGE5Q96GU1 130 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 VAT1LQ9HCJ6 419 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 C4AP0C0L4 1744 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 CD44P16070 742 aaKnown RBP12.19□□□□□ -0.46
BRF1-204ENST00000392557 ERCC5P28715 1186 aaPredicted RBP12.19□□□□□ -0.46
BRF1-204ENST00000392557 SCNN1DP51172 638 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 TBX2Q13207 712 aaPredicted RBP12.19□□□□□ -0.46
BRF1-204ENST00000392557 PIK3AP1Q6ZUJ8 805 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 CCDC148Q8NFR7 591 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 PNKPQ96T60 521 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 TMX4Q9H1E5 349 aaPredicted RBP12.19□□□□□ -0.46
BRF1-204ENST00000392557 RABEP2Q9H5N1 569 aa12.19□□□□□ -0.46
BRF1-204ENST00000392557 NHSQ6T4R5 1651 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 PPEF1O14829 653 aaPredicted RBP12.18□□□□□ -0.46
BRF1-204ENST00000392557 ONECUT3O60422 494 aaPredicted RBP12.18□□□□□ -0.46
BRF1-204ENST00000392557 ABL1P00519 1130 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 ZNF18P17022 549 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 EIF6P56537 245 aaKnown RBP12.18□□□□□ -0.46
BRF1-204ENST00000392557 SLC27A3Q5K4L6 730 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 C12orf60Q5U649 245 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 STAG2Q8N3U4 1231 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 TRIML1Q8N9V2 468 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 DRC1Q96MC2 740 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 ZC3H12CQ9C0D7 883 aaKnown RBP12.18□□□□□ -0.46
BRF1-204ENST00000392557 RBM28Q9NW13 759 aaKnown RBP12.18□□□□□ -0.46
BRF1-204ENST00000392557 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
BRF1-204ENST00000392557 POLRMTO00411 1230 aaKnown RBP12.18□□□□□ -0.46
BRF1-204ENST00000392557 MFAP3LO75121 409 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 CALM1P0DP23 149 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 CALM2P0DP24 149 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 CALM3P0DP25 149 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 MATR3P43243 847 aaKnown RBP eCLIP12.18□□□□□ -0.46
BRF1-204ENST00000392557 MDM2Q00987 491 aaPredicted RBP12.18□□□□□ -0.46
BRF1-204ENST00000392557 PTGDRQ13258 359 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 PKN1Q16512 942 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 TMTC3Q6ZXV5 915 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 RSRC2Q7L4I2 434 aaKnown RBP12.18□□□□□ -0.46
BRF1-204ENST00000392557 RASGRP4Q8TDF6 673 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 PANX2Q96RD6 677 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 RASSF4Q9H2L5 321 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 A0A1B0GTH6 734 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 POTEB2H3BUK9 544 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 ACTN4O43707 911 aaKnown RBP12.18□□□□□ -0.46
BRF1-204ENST00000392557 BBOX1O75936 387 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 VSNL1P62760 191 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 FKBP15Q5T1M5 1219 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 GBP3Q9H0R5 595 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 MAGEC2Q9UBF1 373 aaPredicted RBP12.18□□□□□ -0.46
BRF1-204ENST00000392557 TFR2Q9UP52 801 aa12.18□□□□□ -0.46
BRF1-204ENST00000392557 ORC4O43929 436 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 MMP10P09238 476 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 ATP2B2Q01814 1243 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 IQUBQ8NA54 791 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 SHISA4Q96DD7 197 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 JADE2Q9NQC1 790 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 TRIM10Q9UDY6 481 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 TTF2Q9UNY4 1162 aaKnown RBP12.17□□□□□ -0.46
BRF1-204ENST00000392557 THSD7AQ9UPZ6 1657 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 TTC38Q5R3I4 469 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 CCDC122Q5T0U0 273 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 COL23A1Q86Y22 540 aaPredicted RBP12.17□□□□□ -0.46
BRF1-204ENST00000392557 NAA15Q9BXJ9 866 aaKnown RBP12.17□□□□□ -0.46
BRF1-204ENST00000392557 MYH15Q9Y2K3 1946 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 A0A087X0B3 334 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 SRGAP2O75044 1071 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 DDAH1O94760 285 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 KIF5BP33176 963 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 KRT31Q15323 416 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 CYP26C1Q6V0L0 522 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 HEATR3Q7Z4Q2 680 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 TMTC1Q8IUR5 882 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 NELFBQ8WX92 580 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 IL17RBQ9NRM6 502 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 HDAC6Q9UBN7 1215 aa12.17□□□□□ -0.46
BRF1-204ENST00000392557 PRPF3O43395 683 aaKnown RBP12.16□□□□□ -0.46
BRF1-204ENST00000392557 DNA2P51530 1060 aa12.16□□□□□ -0.46
BRF1-204ENST00000392557 PAK1Q13153 545 aa12.16□□□□□ -0.46
BRF1-204ENST00000392557 TRIM47Q96LD4 638 aa12.16□□□□□ -0.46
BRF1-204ENST00000392557 MED15Q96RN5 788 aa12.16□□□□□ -0.46
BRF1-204ENST00000392557 CRACR2AQ9BSW2 395 aa12.16□□□□□ -0.46
BRF1-204ENST00000392557 MYO6Q9UM54 1294 aa12.16□□□□□ -0.46
BRF1-204ENST00000392557 CASZ1Q86V15 1759 aa12.16□□□□□ -0.46
BRF1-204ENST00000392557 KCNJ18B7U540 433 aa12.16□□□□□ -0.46
BRF1-204ENST00000392557 WNT7AO00755 349 aa12.16□□□□□ -0.46
BRF1-204ENST00000392557 GYPCP04921 128 aa12.16□□□□□ -0.46
BRF1-204ENST00000392557 TRIM21P19474 475 aaKnown RBP12.16□□□□□ -0.46
BRF1-204ENST00000392557 STAT6P42226 847 aa12.16□□□□□ -0.46
BRF1-204ENST00000392557 NAP1L1P55209 391 aaKnown RBP12.16□□□□□ -0.46
BRF1-204ENST00000392557 KCNJ12Q14500 433 aa12.16□□□□□ -0.46
BRF1-204ENST00000392557 CASP8Q14790 479 aa12.16□□□□□ -0.46
BRF1-204ENST00000392557 CRY2Q49AN0 593 aa12.16□□□□□ -0.46
BRF1-204ENST00000392557 DPP8Q6V1X1 898 aaPredicted RBP12.16□□□□□ -0.46
BRF1-204ENST00000392557 NOA1Q8NC60 698 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms