RNA–Protein interactions for RNA: ENST00000390884.1

RNU6-258P-201, Transcript of RNA, U6 small nuclear 258, pseudogene, humanhuman

BASIC

Gene RNU6-258P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-258P-201ENST00000390884 ERV3-1Q14264 604 aa-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 LY6G5CQ5SRR4 150 aa-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 C9orf131Q5VYM1 1079 aa-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 SUSD1Q6UWL2 747 aa-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 PHF6Q8IWS0 365 aaKnown RBP eCLIP-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 KBTBD2Q8IY47 623 aa-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 ZNF295-AS1Q8N0V1 137 aa-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 KRI1Q8N9T8 703 aaKnown RBP-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 ZNF485Q8NCK3 441 aa-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 REPS2Q8NFH8 660 aa-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 RPL36ALQ969Q0 106 aaKnown RBP-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 SIRT1Q96EB6 747 aa-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 LYZL4Q96KX0 146 aa-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 GNRHR2Q96P88 292 aa-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 CHRDL1Q9BU40 450 aa-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 RNF38Q9H0F5 515 aa-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 HIPK2Q9H2X6 1198 aa-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 PRDM10Q9NQV6 1147 aa-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 CLIP2Q9UDT6 1046 aa-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 TPX2Q9ULW0 747 aaKnown RBP-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 IQSEC3Q9UPP2 1182 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 FNDC3AQ9Y2H6 1198 aaKnown RBP-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 ZNF804BA4D1E1 1349 aa-0.16□□□□□ -2.44
RNU6-258P-201ENST00000390884 ADAM10O14672 748 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 ZNF185O15231 689 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 TP73O15350 636 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 KRTAP1-4P0C5Y4 121 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 NCAM1P13591 858 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 KRT5P13647 590 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 ATF2P15336 505 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 DRD4P21917 467 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 RPL13P26373 211 aaKnown RBP-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 CXCR5P32302 372 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 SCNN1AP37088 669 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 PTH2RP49190 550 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 MCCD1P59942 119 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 FGD1P98174 961 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 HHEXQ03014 270 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 CRHR2Q13324 411 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 SMAD4Q13485 552 aaKnown RBP-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 EIF4EBP2Q13542 120 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 LAPTM5Q13571 262 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 NR1I3Q14994 352 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 ETFDHQ16134 617 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 MTX3Q5HYI7 312 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 SFRP5Q5T4F7 317 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 FAM214BQ7L5A3 538 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 POLNQ7Z5Q5 900 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 GAS2L2Q8NHY3 880 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 DENND1AQ8TEH3 1009 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 LMF1Q96S06 567 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 LCE3DQ9BYE3 92 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 PBX4Q9BYU1 374 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 PLA2G12AQ9BZM1 189 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 PHACTR1Q9C0D0 580 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 RASSF4Q9H2L5 321 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 PRDM13Q9H4Q3 707 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 ZNF275Q9NSD4 429 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 SPATA6Q9NWH7 488 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 SEMA5BQ9P283 1151 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 DUSP13Q9UII6 198 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 HCFC2Q9Y5Z7 792 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 USP3Q9Y6I4 520 aa-0.17□□□□□ -2.44
RNU6-258P-201ENST00000390884 RGL2O15211 777 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 ATP9BO43861 1147 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 MMP20O60882 483 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 PPFIA4O75335 1185 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 MOSPD3O75425 235 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 IGLV2-14P01704 120 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 FUCA1P04066 466 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 CYP11A1P05108 521 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 GM2AP17900 193 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 TCEA1P23193 301 aaKnown RBP-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 GJA4P35212 333 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 LTBRP36941 435 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 MAPKAPK2P49137 400 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 TAP1Q03518 808 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 OCA2Q04671 838 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 VAC14Q08AM6 782 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 LAMB3Q13751 1172 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 KCNC3Q14003 757 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 FKBP8Q14318 412 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 MTFR1Q15390 333 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 CSPP1Q1MSJ5 1256 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 KCNV1Q6PIU1 500 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 CEP128Q6ZU80 1094 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 B3GNT8Q7Z7M8 397 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 DTX3Q8N9I9 347 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 ZDHHC1Q8WTX9 485 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 C7orf43Q8WVR3 580 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 LRRC37BQ96QE4 947 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 GATA5Q9BWX5 397 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 MEGF9Q9H1U4 602 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 TRIT1Q9H3H1 467 aaKnown RBP-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 SOX17Q9H6I2 414 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 SEC61A2Q9H9S3 476 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 GJB4Q9NTQ9 266 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 DNMT3BQ9UBC3 853 aaKnown RBP-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 GIT1Q9Y2X7 761 aa-0.18□□□□□ -2.44
RNU6-258P-201ENST00000390884 HCN4Q9Y3Q4 1203 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms