RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 KCTD2Q14681 263 aa17.53■□□□□ 0.4
IGHV3-53-201ENST00000390627 SGMS1Q86VZ5 419 aa17.53■□□□□ 0.4
IGHV3-53-201ENST00000390627 TRMT44Q8IYL2 757 aaKnown RBP17.53■□□□□ 0.4
IGHV3-53-201ENST00000390627 CHST13Q8NET6 341 aa17.53■□□□□ 0.4
IGHV3-53-201ENST00000390627 CTCFLQ8NI51 663 aaPredicted RBP17.53■□□□□ 0.4
IGHV3-53-201ENST00000390627 NUP133Q8WUM0 1156 aa17.53■□□□□ 0.4
IGHV3-53-201ENST00000390627 USP6NLQ92738 828 aa17.53■□□□□ 0.4
IGHV3-53-201ENST00000390627 MMP19Q99542 508 aa17.53■□□□□ 0.4
IGHV3-53-201ENST00000390627 UBA5Q9GZZ9 404 aa17.53■□□□□ 0.4
IGHV3-53-201ENST00000390627 GPHNQ9NQX3 736 aaPredicted RBP17.53■□□□□ 0.4
IGHV3-53-201ENST00000390627 SLC5A4Q9NY91 659 aa17.53■□□□□ 0.4
IGHV3-53-201ENST00000390627 MAD2L2Q9UI95 211 aa17.53■□□□□ 0.4
IGHV3-53-201ENST00000390627 CCPG1Q9ULG6 757 aa17.53■□□□□ 0.4
IGHV3-53-201ENST00000390627 SLC12A7Q9Y666 1083 aa17.53■□□□□ 0.4
IGHV3-53-201ENST00000390627 PALM3A6NDB9 673 aaPredicted RBP17.52■□□□□ 0.4
IGHV3-53-201ENST00000390627 KLRF2D3W0D1 207 aa17.52■□□□□ 0.4
IGHV3-53-201ENST00000390627 DHX16O60231 1041 aaKnown RBP17.52■□□□□ 0.4
IGHV3-53-201ENST00000390627 CASTP20810 708 aaKnown RBP17.52■□□□□ 0.4
IGHV3-53-201ENST00000390627 ADORA2AP29274 412 aa17.52■□□□□ 0.4
IGHV3-53-201ENST00000390627 KIF5BP33176 963 aa17.52■□□□□ 0.4
IGHV3-53-201ENST00000390627 SNAP25P60880 206 aa17.52■□□□□ 0.4
IGHV3-53-201ENST00000390627 SYNE3Q6ZMZ3 975 aa17.52■□□□□ 0.4
IGHV3-53-201ENST00000390627 DPP9Q86TI2 863 aa17.52■□□□□ 0.4
IGHV3-53-201ENST00000390627 STAG2Q8N3U4 1231 aa17.52■□□□□ 0.4
IGHV3-53-201ENST00000390627 SH3TC2Q8TF17 1288 aa17.52■□□□□ 0.4
IGHV3-53-201ENST00000390627 AGBL1Q96MI9 1066 aa17.52■□□□□ 0.4
IGHV3-53-201ENST00000390627 TCEANC2Q96MN5 208 aa17.52■□□□□ 0.4
IGHV3-53-201ENST00000390627 RIPK3Q9Y572 518 aa17.52■□□□□ 0.4
IGHV3-53-201ENST00000390627 HOXC6P09630 235 aa17.51■□□□□ 0.39
IGHV3-53-201ENST00000390627 ALAS1P13196 640 aa17.51■□□□□ 0.39
IGHV3-53-201ENST00000390627 ELNP15502 786 aa17.51■□□□□ 0.39
IGHV3-53-201ENST00000390627 RPS6KB1P23443 525 aa17.51■□□□□ 0.39
IGHV3-53-201ENST00000390627 ANAPC15P60006 121 aa17.51■□□□□ 0.39
IGHV3-53-201ENST00000390627 UBXN2AP68543 259 aa17.51■□□□□ 0.39
IGHV3-53-201ENST00000390627 C8orf34Q49A92 452 aa17.51■□□□□ 0.39
IGHV3-53-201ENST00000390627 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.51■□□□□ 0.39
IGHV3-53-201ENST00000390627 ADGRF4Q8IZF3 695 aa17.51■□□□□ 0.39
IGHV3-53-201ENST00000390627 ZNF333Q96JL9 665 aa17.51■□□□□ 0.39
IGHV3-53-201ENST00000390627 TM6SF1Q9BZW5 370 aa17.51■□□□□ 0.39
IGHV3-53-201ENST00000390627 CPVLQ9H3G5 476 aa17.51■□□□□ 0.39
IGHV3-53-201ENST00000390627 ACAD9Q9H845 621 aa17.51■□□□□ 0.39
IGHV3-53-201ENST00000390627 RNF146Q9NTX7 359 aa17.51■□□□□ 0.39
IGHV3-53-201ENST00000390627 BIN2Q9UBW5 565 aaPredicted RBP17.51■□□□□ 0.39
IGHV3-53-201ENST00000390627 CCDC85CA6NKD9 419 aa17.5■□□□□ 0.39
IGHV3-53-201ENST00000390627 HMGCRP04035 888 aa17.5■□□□□ 0.39
IGHV3-53-201ENST00000390627 GNAQP50148 359 aa17.5■□□□□ 0.39
IGHV3-53-201ENST00000390627 CDC37Q16543 378 aaPredicted RBP17.5■□□□□ 0.39
IGHV3-53-201ENST00000390627 TRERF1Q96PN7 1200 aa17.5■□□□□ 0.39
IGHV3-53-201ENST00000390627 MYL10Q9BUA6 226 aa17.5■□□□□ 0.39
IGHV3-53-201ENST00000390627 HOMER2Q9NSB8 354 aa17.5■□□□□ 0.39
IGHV3-53-201ENST00000390627 CPA1P15085 419 aa17.49■□□□□ 0.39
IGHV3-53-201ENST00000390627 APOA5Q6Q788 366 aa17.49■□□□□ 0.39
IGHV3-53-201ENST00000390627 RUFY3Q7L099 469 aa17.49■□□□□ 0.39
IGHV3-53-201ENST00000390627 MICU3Q86XE3 530 aa17.49■□□□□ 0.39
IGHV3-53-201ENST00000390627 ANKRD35Q8N283 1001 aa17.49■□□□□ 0.39
IGHV3-53-201ENST00000390627 FBXL16Q8N461 479 aa17.49■□□□□ 0.39
IGHV3-53-201ENST00000390627 TRIB2Q92519 343 aa17.49■□□□□ 0.39
IGHV3-53-201ENST00000390627 DDX11Q96FC9 970 aa17.49■□□□□ 0.39
IGHV3-53-201ENST00000390627 LZTS2Q9BRK4 669 aa17.49■□□□□ 0.39
IGHV3-53-201ENST00000390627 ZSWIM6Q9HCJ5 1215 aa17.49■□□□□ 0.39
IGHV3-53-201ENST00000390627 CYP46A1Q9Y6A2 500 aa17.49■□□□□ 0.39
IGHV3-53-201ENST00000390627 HTTP42858 3142 aa17.49■□□□□ 0.39
IGHV3-53-201ENST00000390627 ZBTB43O43298 467 aa17.48■□□□□ 0.39
IGHV3-53-201ENST00000390627 INHAP05111 366 aa17.48■□□□□ 0.39
IGHV3-53-201ENST00000390627 RCAN1P53805 252 aa17.48■□□□□ 0.39
IGHV3-53-201ENST00000390627 Q6ZUG5 572 aa17.48■□□□□ 0.39
IGHV3-53-201ENST00000390627 NPLOC4Q8TAT6 608 aa17.48■□□□□ 0.39
IGHV3-53-201ENST00000390627 JMJD4Q9H9V9 463 aa17.48■□□□□ 0.39
IGHV3-53-201ENST00000390627 VAT1LQ9HCJ6 419 aa17.48■□□□□ 0.39
IGHV3-53-201ENST00000390627 PFASO15067 1338 aa17.47■□□□□ 0.39
IGHV3-53-201ENST00000390627 KLF18A0A0U1RQI7 1052 aa17.47■□□□□ 0.39
IGHV3-53-201ENST00000390627 COBLO75128 1261 aa17.47■□□□□ 0.39
IGHV3-53-201ENST00000390627 SEC24BO95487 1268 aa17.47■□□□□ 0.39
IGHV3-53-201ENST00000390627 RXRAP19793 462 aa17.47■□□□□ 0.39
IGHV3-53-201ENST00000390627 SMARCA1P28370 1054 aa17.47■□□□□ 0.39
IGHV3-53-201ENST00000390627 QRICH1Q2TAL8 776 aa17.47■□□□□ 0.39
IGHV3-53-201ENST00000390627 MFSD14CQ5VZR4 134 aa17.47■□□□□ 0.39
IGHV3-53-201ENST00000390627 OLFML2BQ68BL8 750 aa17.47■□□□□ 0.39
IGHV3-53-201ENST00000390627 FANCBQ8NB91 859 aa17.47■□□□□ 0.39
IGHV3-53-201ENST00000390627 BRF1Q92994 677 aa17.47■□□□□ 0.39
IGHV3-53-201ENST00000390627 MTMR8Q96EF0 704 aa17.47■□□□□ 0.39
IGHV3-53-201ENST00000390627 SPZ1Q9BXG8 430 aa17.47■□□□□ 0.39
IGHV3-53-201ENST00000390627 AGXT2Q9BYV1 514 aa17.47■□□□□ 0.39
IGHV3-53-201ENST00000390627 RIOX1Q9H6W3 641 aa17.47■□□□□ 0.39
IGHV3-53-201ENST00000390627 RBM28Q9NW13 759 aaKnown RBP17.47■□□□□ 0.39
IGHV3-53-201ENST00000390627 DIS3Q9Y2L1 958 aaKnown RBP17.47■□□□□ 0.39
IGHV3-53-201ENST00000390627 ZBTB5O15062 677 aa17.46■□□□□ 0.39
IGHV3-53-201ENST00000390627 PGK2P07205 417 aa17.46■□□□□ 0.39
IGHV3-53-201ENST00000390627 TRAF1Q13077 416 aa17.46■□□□□ 0.39
IGHV3-53-201ENST00000390627 CCL14Q16627 93 aa17.46■□□□□ 0.39
IGHV3-53-201ENST00000390627 USH1GQ495M9 461 aa17.46■□□□□ 0.39
IGHV3-53-201ENST00000390627 FBXO11Q86XK2 927 aa17.46■□□□□ 0.39
IGHV3-53-201ENST00000390627 RAB11FIP4Q86YS3 637 aa17.46■□□□□ 0.39
IGHV3-53-201ENST00000390627 CCDC144CPQ8IYA2 1237 aa17.46■□□□□ 0.39
IGHV3-53-201ENST00000390627 TMEM106CQ9BVX2 250 aa17.46■□□□□ 0.39
IGHV3-53-201ENST00000390627 AMNQ9BXJ7 453 aa17.46■□□□□ 0.39
IGHV3-53-201ENST00000390627 UPF3BQ9BZI7 483 aaKnown RBP17.46■□□□□ 0.39
IGHV3-53-201ENST00000390627 A1CFQ9NQ94 594 aaKnown RBP17.46■□□□□ 0.39
IGHV3-53-201ENST00000390627 BRPF3Q9ULD4 1205 aa17.46■□□□□ 0.39
IGHV3-53-201ENST00000390627 NAP1L2Q9ULW6 460 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms