RNA–Protein interactions for RNA: ENST00000390353.2

TRBV6-1-201, Transcript of T cell receptor beta variable 6-1, humanhuman

APPRIS P1 BASIC

Gene TRBV6-1, Length 401 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1-201ENST00000390353 TFAP4Q01664 338 aa9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 PPIGQ13427 754 aaKnown RBP eCLIP9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 KCNA10Q16322 511 aa9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 CCDC144BQ3MJ40 725 aa9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 GNASQ5JWF2 1037 aa9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 ZMYM1Q5SVZ6 1142 aa9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 TSHZ3Q63HK5 1081 aa9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 NOL8Q76FK4 1167 aaKnown RBP9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 ARMCX2Q7L311 632 aa9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 LRRC47Q8N1G4 583 aaKnown RBP9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 TMEM199Q8N511 208 aa9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 KLHDC9Q8NEP7 349 aa9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 STAG1Q8WVM7 1258 aa9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 GUCD1Q96NT3 240 aa9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 MPHOSPH6Q99547 160 aaKnown RBP9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 MTIF3Q9H2K0 278 aaKnown RBP9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 HOMER2Q9NSB8 354 aa9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 RIPK3Q9Y572 518 aa9.85□□□□□ -0.83
TRBV6-1-201ENST00000390353 ALPK3Q96L96 1907 aa9.84□□□□□ -0.83
TRBV6-1-201ENST00000390353 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.84□□□□□ -0.83
TRBV6-1-201ENST00000390353 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.84□□□□□ -0.83
TRBV6-1-201ENST00000390353 TIMP1P01033 207 aa9.84□□□□□ -0.83
TRBV6-1-201ENST00000390353 GJA9P57773 515 aa9.84□□□□□ -0.83
TRBV6-1-201ENST00000390353 AAMPQ13685 434 aa9.84□□□□□ -0.83
TRBV6-1-201ENST00000390353 C9orf50Q5SZB4 431 aa9.84□□□□□ -0.83
TRBV6-1-201ENST00000390353 RCSD1Q6JBY9 416 aa9.84□□□□□ -0.83
TRBV6-1-201ENST00000390353 SH3RF1Q7Z6J0 888 aa9.84□□□□□ -0.83
TRBV6-1-201ENST00000390353 EVI5LQ96CN4 794 aa9.84□□□□□ -0.83
TRBV6-1-201ENST00000390353 FAM161BQ96MY7 647 aa9.84□□□□□ -0.83
TRBV6-1-201ENST00000390353 CDX2Q99626 313 aaPredicted RBP9.84□□□□□ -0.83
TRBV6-1-201ENST00000390353 AP5M1Q9H0R1 490 aa9.84□□□□□ -0.83
TRBV6-1-201ENST00000390353 UPF3AQ9H1J1 476 aaKnown RBP9.84□□□□□ -0.83
TRBV6-1-201ENST00000390353 SEMA6BQ9H3T3 888 aa9.84□□□□□ -0.83
TRBV6-1-201ENST00000390353 RNF146Q9NTX7 359 aa9.84□□□□□ -0.83
TRBV6-1-201ENST00000390353 ADD3Q9UEY8 706 aaKnown RBP9.84□□□□□ -0.83
TRBV6-1-201ENST00000390353 LOC102724159A0A0B4J2E5 919 aa9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 B4DLN1 442 aa9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 ORC4O43929 436 aa9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 RANBP6O60518 1105 aaKnown RBP9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 ASGR1P07306 291 aa9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 PCP11498 1178 aaKnown RBP9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 MCCP23508 829 aa9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 NT5C2P49902 561 aa9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 MRPL12P52815 198 aaKnown RBP9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 MFAP1P55081 439 aaKnown RBP9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 NKX3-2P78367 333 aa9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 TNFAIP2Q03169 654 aa9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 FAAP100Q0VG06 881 aa9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 PWP2Q15269 919 aaKnown RBP9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 CCSAPQ6IQ19 270 aaPredicted RBP9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 MFSD5Q6N075 450 aa9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 PSRC1Q6PGN9 363 aaPredicted RBP9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 CCDC144CPQ8IYA2 1237 aa9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 MAFAQ8NHW3 353 aaPredicted RBP9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 PI4K2BQ8TCG2 481 aa9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 DCAF4Q8WV16 495 aa9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 TRERF1Q96PN7 1200 aa9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 HELLSQ9NRZ9 838 aa9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 ANAPC4Q9UJX5 808 aa9.83□□□□□ -0.84
TRBV6-1-201ENST00000390353 ARVCFO00192 962 aa9.82□□□□□ -0.84
TRBV6-1-201ENST00000390353 ICAM1P05362 532 aa9.82□□□□□ -0.84
TRBV6-1-201ENST00000390353 ALAS1P13196 640 aa9.82□□□□□ -0.84
TRBV6-1-201ENST00000390353 FOSL2P15408 326 aa9.82□□□□□ -0.84
TRBV6-1-201ENST00000390353 FSCN1Q16658 493 aaKnown RBP9.82□□□□□ -0.84
TRBV6-1-201ENST00000390353 CCDC96Q2M329 555 aa9.82□□□□□ -0.84
TRBV6-1-201ENST00000390353 BRDTQ58F21 947 aaPredicted RBP9.82□□□□□ -0.84
TRBV6-1-201ENST00000390353 IQSEC1Q6DN90 963 aa9.82□□□□□ -0.84
TRBV6-1-201ENST00000390353 FAM133AQ8N9E0 248 aa9.82□□□□□ -0.84
TRBV6-1-201ENST00000390353 LENG1Q96BZ8 264 aaPredicted RBP9.82□□□□□ -0.84
TRBV6-1-201ENST00000390353 A1CFQ9NQ94 594 aaKnown RBP9.82□□□□□ -0.84
TRBV6-1-201ENST00000390353 TOMM22Q9NS69 142 aa9.82□□□□□ -0.84
TRBV6-1-201ENST00000390353 TBX21Q9UL17 535 aa9.82□□□□□ -0.84
TRBV6-1-201ENST00000390353 CCPG1Q9ULG6 757 aa9.82□□□□□ -0.84
TRBV6-1-201ENST00000390353 Q9Y3F1 56 aa9.82□□□□□ -0.84
TRBV6-1-201ENST00000390353 COL6A3P12111 3177 aa9.81□□□□□ -0.84
TRBV6-1-201ENST00000390353 TOP1P11387 765 aaKnown RBP9.81□□□□□ -0.84
TRBV6-1-201ENST00000390353 CDK7P50613 346 aa9.81□□□□□ -0.84
TRBV6-1-201ENST00000390353 ALX1Q15699 326 aa9.81□□□□□ -0.84
TRBV6-1-201ENST00000390353 ANKRD45Q5TZF3 282 aa9.81□□□□□ -0.84
TRBV6-1-201ENST00000390353 TLK2Q86UE8 772 aa9.81□□□□□ -0.84
TRBV6-1-201ENST00000390353 SYMPKQ92797 1274 aaKnown RBP9.81□□□□□ -0.84
TRBV6-1-201ENST00000390353 AGBL1Q96MI9 1066 aa9.81□□□□□ -0.84
TRBV6-1-201ENST00000390353 SEC62Q99442 399 aaKnown RBP9.81□□□□□ -0.84
TRBV6-1-201ENST00000390353 MAF1Q9H063 256 aa9.81□□□□□ -0.84
TRBV6-1-201ENST00000390353 RNF41Q9H4P4 317 aaPredicted RBP9.81□□□□□ -0.84
TRBV6-1-201ENST00000390353 VTA1Q9NP79 307 aa9.81□□□□□ -0.84
TRBV6-1-201ENST00000390353 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.81□□□□□ -0.84
TRBV6-1-201ENST00000390353 RLFQ13129 1914 aa9.81□□□□□ -0.84
TRBV6-1-201ENST00000390353 ZMYM6O95789 1325 aa9.81□□□□□ -0.84
TRBV6-1-201ENST00000390353 RAD50Q92878 1312 aa9.81□□□□□ -0.84
TRBV6-1-201ENST00000390353 DNAH12Q6ZR08 3092 aa9.8□□□□□ -0.84
TRBV6-1-201ENST00000390353 SUPT20HL2P0C7V6 817 aa9.8□□□□□ -0.84
TRBV6-1-201ENST00000390353 DNAJB2P25686 324 aa9.8□□□□□ -0.84
TRBV6-1-201ENST00000390353 ITGB8P26012 769 aa9.8□□□□□ -0.84
TRBV6-1-201ENST00000390353 CPT1AP50416 773 aa9.8□□□□□ -0.84
TRBV6-1-201ENST00000390353 CNTN2Q02246 1040 aa9.8□□□□□ -0.84
TRBV6-1-201ENST00000390353 RAB30Q15771 203 aa9.8□□□□□ -0.84
TRBV6-1-201ENST00000390353 MCMDC2Q4G0Z9 681 aa9.8□□□□□ -0.84
TRBV6-1-201ENST00000390353 CCDC178Q5BJE1 867 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms