RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 FBXO3Q9UK99 471 aa14.54□□□□□ -0.08
TRAPPC9-201ENST00000389328 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC9-201ENST00000389328 A2ML1A8K2U0 1454 aa14.54□□□□□ -0.08
TRAPPC9-201ENST00000389328 MYOM1P52179 1685 aa14.54□□□□□ -0.08
TRAPPC9-201ENST00000389328 GOLGA8HP0CJ92 632 aa14.54□□□□□ -0.08
TRAPPC9-201ENST00000389328 USP14P54578 494 aa14.54□□□□□ -0.08
TRAPPC9-201ENST00000389328 ZBED6P86452 979 aa14.54□□□□□ -0.08
TRAPPC9-201ENST00000389328 NRKQ7Z2Y5 1582 aa14.54□□□□□ -0.08
TRAPPC9-201ENST00000389328 F8W031 263 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 KRIT1O00522 736 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 NAA35Q5VZE5 725 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 KAZALD1Q96I82 304 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 NLRP3Q96P20 1036 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 GPCPD1Q9NPB8 672 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 BIN2Q9UBW5 565 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 NFU1Q9UMS0 254 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 PLEKHA8P1O95397 391 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 RPSAP08865 295 aaKnown RBP14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 CALCOCO2Q13137 446 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 VWA3BQ502W6 1294 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 GKAP1Q5VSY0 366 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 P2RX5Q93086 422 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 TBC1D31Q96DN5 1066 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 PNKPQ96T60 521 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 LY9Q9HBG7 655 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 GRIN1Q05586 938 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 PLS1Q14651 629 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 NCAPHQ15003 741 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 CALCRLQ16602 461 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 MUM1L1Q5H9M0 696 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 KRT25Q7Z3Z0 450 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 MGARPQ8TDB4 240 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 RIPOR2Q9Y4F9 1068 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 NEBLO76041 1014 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 CLTAP09496 248 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 GJC1P36383 396 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 PRPHP41219 470 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 SPATS2Q86XZ4 545 aaKnown RBP14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 SYNE4Q8N205 404 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 COG1Q8WTW3 980 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 MMS19Q96T76 1030 aa14.53□□□□□ -0.08
TRAPPC9-201ENST00000389328 A0A1B0GTH6 734 aa14.52□□□□□ -0.08
TRAPPC9-201ENST00000389328 SMCO2A6NFE2 343 aa14.52□□□□□ -0.08
TRAPPC9-201ENST00000389328 H3BQF6 201 aa14.52□□□□□ -0.08
TRAPPC9-201ENST00000389328 LDHBP07195 334 aaKnown RBP14.52□□□□□ -0.08
TRAPPC9-201ENST00000389328 LACTBP83111 547 aaPredicted RBP14.52□□□□□ -0.08
TRAPPC9-201ENST00000389328 ATG9AQ7Z3C6 839 aa14.52□□□□□ -0.08
TRAPPC9-201ENST00000389328 FNBP4Q8N3X1 1017 aaPredicted RBP14.52□□□□□ -0.08
TRAPPC9-201ENST00000389328 ARAP3Q8WWN8 1544 aa14.52□□□□□ -0.08
TRAPPC9-201ENST00000389328 NR1I3Q14994 352 aa14.52□□□□□ -0.09
TRAPPC9-201ENST00000389328 CCDC50Q8IVM0 306 aa14.52□□□□□ -0.09
TRAPPC9-201ENST00000389328 PNMA1Q8ND90 353 aa14.52□□□□□ -0.09
TRAPPC9-201ENST00000389328 BANK1Q8NDB2 785 aa14.52□□□□□ -0.09
TRAPPC9-201ENST00000389328 CUL5Q93034 780 aa14.52□□□□□ -0.09
TRAPPC9-201ENST00000389328 SENP2Q9HC62 589 aa14.52□□□□□ -0.09
TRAPPC9-201ENST00000389328 SASH3O75995 380 aa14.52□□□□□ -0.09
TRAPPC9-201ENST00000389328 ADAMTS2O95450 1211 aa14.52□□□□□ -0.09
TRAPPC9-201ENST00000389328 PRCPP42785 496 aa14.52□□□□□ -0.09
TRAPPC9-201ENST00000389328 ANTXR2P58335 489 aa14.52□□□□□ -0.09
TRAPPC9-201ENST00000389328 GSTO1P78417 241 aa14.52□□□□□ -0.09
TRAPPC9-201ENST00000389328 HOOK3Q86VS8 718 aa14.52□□□□□ -0.09
TRAPPC9-201ENST00000389328 ZNF579Q8NAF0 562 aaKnown RBP14.52□□□□□ -0.09
TRAPPC9-201ENST00000389328 DNAJC5Q9H3Z4 198 aa14.52□□□□□ -0.09
TRAPPC9-201ENST00000389328 ATG3Q9NT62 314 aa14.52□□□□□ -0.09
TRAPPC9-201ENST00000389328 AXIN2Q9Y2T1 843 aa14.52□□□□□ -0.09
TRAPPC9-201ENST00000389328 ESYT3A0FGR9 886 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 FAM205CA6NFA0 338 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 SEMA3EO15041 775 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 ACTN4O43707 911 aaKnown RBP14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 NR1D1P20393 614 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 LRRC41Q15345 812 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 SMCR8Q8TEV9 937 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 FBXO2Q9UK22 296 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 CD163L1Q9NR16 1453 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 ZNF185O15231 689 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 ABCB4P21439 1286 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 MTMR3Q13615 1198 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 CCDC170Q8IYT3 715 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 PCDHA13Q9Y5I0 950 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 RFX7Q2KHR2 1363 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 ERBB3P21860 1342 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 FLOT1O75955 427 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 OR52Z1P0C646 297 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 KIF11P52732 1056 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 CCDC77Q9BR77 488 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 PLVAPQ9BX97 442 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 MLXIPQ9HAP2 919 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 STIM2Q9P246 746 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 STK38LQ9Y2H1 464 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 USP31Q70CQ4 1352 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 NEXMIFQ5QGS0 1516 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 INO80Q9ULG1 1556 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 UBE2Q2LH0YL09 131 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 DYNLL1P63167 89 aaKnown RBP14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 TMEM132AQ24JP5 1023 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 STXBP4Q6ZWJ1 553 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 REXO1Q8N1G1 1221 aaKnown RBP14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 CCDC24Q8N4L8 307 aa14.51□□□□□ -0.09
TRAPPC9-201ENST00000389328 RETREG2Q8NC44 543 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms