RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 SF3B3Q15393 1217 aaKnown RBP21.02■□□□□ 0.96
CSPG5-202ENST00000383738 PRR16Q569H4 304 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 BRIP1Q9BX63 1249 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 PSTPIP2Q9H939 334 aa21.02■□□□□ 0.96
CSPG5-202ENST00000383738 ERLIN2O94905 339 aa21.01■□□□□ 0.95
CSPG5-202ENST00000383738 GYS1P13807 737 aa21.01■□□□□ 0.95
CSPG5-202ENST00000383738 INPP5BP32019 993 aa21.01■□□□□ 0.95
CSPG5-202ENST00000383738 GOLGA5Q8TBA6 731 aa21.01■□□□□ 0.95
CSPG5-202ENST00000383738 JRKLQ9Y4A0 524 aa21.01■□□□□ 0.95
CSPG5-202ENST00000383738 HSF2BPO75031 334 aa21.01■□□□□ 0.95
CSPG5-202ENST00000383738 GH2P01242 217 aa21.01■□□□□ 0.95
CSPG5-202ENST00000383738 CRKP46108 304 aa21.01■□□□□ 0.95
CSPG5-202ENST00000383738 PDE4DQ08499 809 aa21.01■□□□□ 0.95
CSPG5-202ENST00000383738 SND1Q7KZF4 910 aaKnown RBP eCLIP21.01■□□□□ 0.95
CSPG5-202ENST00000383738 FLOT1O75955 427 aa21.01■□□□□ 0.95
CSPG5-202ENST00000383738 IFFO1Q0D2I5 559 aa21.01■□□□□ 0.95
CSPG5-202ENST00000383738 NELFCDQ8IXH7 590 aa21.01■□□□□ 0.95
CSPG5-202ENST00000383738 SMYD4Q8IYR2 804 aaPredicted RBP21.01■□□□□ 0.95
CSPG5-202ENST00000383738 FAM212AQ96EL1 285 aa21.01■□□□□ 0.95
CSPG5-202ENST00000383738 SMIM23A6NLE4 172 aa21■□□□□ 0.95
CSPG5-202ENST00000383738 GBP2P32456 591 aaPredicted RBP21■□□□□ 0.95
CSPG5-202ENST00000383738 E4F1Q66K89 784 aaPredicted RBP21■□□□□ 0.95
CSPG5-202ENST00000383738 POLD4Q9HCU8 107 aa21■□□□□ 0.95
CSPG5-202ENST00000383738 USP42Q9H9J4 1324 aaKnown RBP21■□□□□ 0.95
CSPG5-202ENST00000383738 RESTQ13127 1097 aa21■□□□□ 0.95
CSPG5-202ENST00000383738 PIM2Q9P1W9 311 aa21■□□□□ 0.95
CSPG5-202ENST00000383738 MYOM1P52179 1685 aa21■□□□□ 0.95
CSPG5-202ENST00000383738 USP32Q8NFA0 1604 aa21■□□□□ 0.95
CSPG5-202ENST00000383738 ENAHQ8N8S7 591 aaPredicted RBP21■□□□□ 0.95
CSPG5-202ENST00000383738 BCAS4Q8TDM0 211 aa21■□□□□ 0.95
CSPG5-202ENST00000383738 TMCO5BA8MYB1 307 aa21■□□□□ 0.95
CSPG5-202ENST00000383738 CALCRLQ16602 461 aa21■□□□□ 0.95
CSPG5-202ENST00000383738 CCDC84Q86UT8 332 aaPredicted RBP21■□□□□ 0.95
CSPG5-202ENST00000383738 NSUN4Q96CB9 384 aaKnown RBP21■□□□□ 0.95
CSPG5-202ENST00000383738 PRM3Q9NNZ6 103 aa21■□□□□ 0.95
CSPG5-202ENST00000383738 RTEL1Q9NZ71 1219 aa21■□□□□ 0.95
CSPG5-202ENST00000383738 CTNND2Q9UQB3 1225 aa21■□□□□ 0.95
CSPG5-202ENST00000383738 FRMD3A2A2Y4 597 aa20.99■□□□□ 0.95
CSPG5-202ENST00000383738 SOWAHDA6NJG2 315 aa20.99■□□□□ 0.95
CSPG5-202ENST00000383738 USO1O60763 962 aaKnown RBP20.99■□□□□ 0.95
CSPG5-202ENST00000383738 KCTD16Q68DU8 428 aa20.99■□□□□ 0.95
CSPG5-202ENST00000383738 TAF4BQ92750 862 aa20.99■□□□□ 0.95
CSPG5-202ENST00000383738 PRPF4BQ13523 1007 aaKnown RBP20.99■□□□□ 0.95
CSPG5-202ENST00000383738 ARMCX5Q6P1M9 558 aa20.99■□□□□ 0.95
CSPG5-202ENST00000383738 TMOD4Q9NZQ9 345 aa20.99■□□□□ 0.95
CSPG5-202ENST00000383738 UBE2SQ16763 222 aa20.99■□□□□ 0.95
CSPG5-202ENST00000383738 SLC35F6Q8N357 371 aa20.99■□□□□ 0.95
CSPG5-202ENST00000383738 CCDC114Q96M63 670 aa20.99■□□□□ 0.95
CSPG5-202ENST00000383738 CUTAO60888 179 aa20.98■□□□□ 0.95
CSPG5-202ENST00000383738 MCM3P25205 808 aa20.98■□□□□ 0.95
CSPG5-202ENST00000383738 NOP2P46087 812 aaKnown RBP20.98■□□□□ 0.95
CSPG5-202ENST00000383738 PTPROQ16827 1216 aa20.98■□□□□ 0.95
CSPG5-202ENST00000383738 PLA2G12BQ9BX93 195 aa20.98■□□□□ 0.95
CSPG5-202ENST00000383738 PCDHB6Q9Y5E3 794 aa20.98■□□□□ 0.95
CSPG5-202ENST00000383738 RC3H1Q5TC82 1133 aaKnown RBP20.98■□□□□ 0.95
CSPG5-202ENST00000383738 UBE2Q2LH0YL09 131 aa20.98■□□□□ 0.95
CSPG5-202ENST00000383738 CAPN7Q9Y6W3 813 aa20.98■□□□□ 0.95
CSPG5-202ENST00000383738 CAMTA1Q9Y6Y1 1673 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 TRAF5O00463 557 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 DCCP43146 1447 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 KIF23Q02241 960 aaPredicted RBP20.97■□□□□ 0.95
CSPG5-202ENST00000383738 HERC4Q5GLZ8 1057 aaPredicted RBP20.97■□□□□ 0.95
CSPG5-202ENST00000383738 WDR24Q96S15 920 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 TAOK3Q9H2K8 898 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 SH2D4AQ9H788 454 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 RCOR1Q9UKL0 485 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 TESPA1A2RU30 521 aaPredicted RBP20.97■□□□□ 0.95
CSPG5-202ENST00000383738 SEPT2Q15019 361 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 CC2D1AQ6P1N0 951 aaPredicted RBP20.97■□□□□ 0.95
CSPG5-202ENST00000383738 VTI1AQ96AJ9 217 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 SUGCTQ9HAC7 445 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 ABCB6Q9NP58 842 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 LUC7L2Q9Y383 392 aaKnown RBP20.97■□□□□ 0.95
CSPG5-202ENST00000383738 CCZ1BP86790 482 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 CCZ1P86791 482 aaPredicted RBP20.97■□□□□ 0.95
CSPG5-202ENST00000383738 CIAPIN1Q6FI81 312 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 SV2BQ7L1I2 683 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 CCDC91Q7Z6B0 441 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 TPH2Q8IWU9 490 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 OXER1Q8TDS5 423 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 CEP95Q96GE4 821 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 NEURL4Q96JN8 1562 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 FAM13AO94988 1023 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 HOXA13P31271 388 aaPredicted RBP20.97■□□□□ 0.95
CSPG5-202ENST00000383738 GUCY1A2P33402 732 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 ACRBPQ8NEB7 543 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 DYDC1Q8WWB3 177 aa20.97■□□□□ 0.95
CSPG5-202ENST00000383738 GOLGA6BA6NDN3 693 aa20.96■□□□□ 0.95
CSPG5-202ENST00000383738 MAP2K2P36507 400 aa20.96■□□□□ 0.95
CSPG5-202ENST00000383738 PPP4R3AQ6IN85 833 aa20.96■□□□□ 0.95
CSPG5-202ENST00000383738 SULF1Q8IWU6 871 aa20.96■□□□□ 0.95
CSPG5-202ENST00000383738 SAMSN1Q9NSI8 373 aaKnown RBP20.96■□□□□ 0.95
CSPG5-202ENST00000383738 LOC102724159A0A0B4J2E5 919 aa20.96■□□□□ 0.95
CSPG5-202ENST00000383738 USP17L5A8MUK1 530 aa20.96■□□□□ 0.95
CSPG5-202ENST00000383738 KIF5AQ12840 1032 aa20.96■□□□□ 0.95
CSPG5-202ENST00000383738 NAA25Q14CX7 972 aa20.96■□□□□ 0.95
CSPG5-202ENST00000383738 PWP2Q15269 919 aaKnown RBP20.96■□□□□ 0.95
CSPG5-202ENST00000383738 DPF2Q92785 391 aa20.96■□□□□ 0.95
CSPG5-202ENST00000383738 SPAG5Q96R06 1193 aa20.96■□□□□ 0.95
CSPG5-202ENST00000383738 RMND1Q9NWS8 449 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms