RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 EIF3CLB5ME19 914 aaKnown RBP20.17■□□□□ 0.82
GNE-201ENST00000377902 DDAH1O94760 285 aa20.17■□□□□ 0.82
GNE-201ENST00000377902 STIM1Q13586 685 aa20.17■□□□□ 0.82
GNE-201ENST00000377902 COG1Q8WTW3 980 aa20.17■□□□□ 0.82
GNE-201ENST00000377902 HDAC7Q8WUI4 952 aa20.17■□□□□ 0.82
GNE-201ENST00000377902 DRC1Q96MC2 740 aa20.17■□□□□ 0.82
GNE-201ENST00000377902 EIF3CQ99613 913 aaKnown RBP20.17■□□□□ 0.82
GNE-201ENST00000377902 RABEP2Q9H5N1 569 aa20.17■□□□□ 0.82
GNE-201ENST00000377902 DISP2A7MBM2 1401 aa20.17■□□□□ 0.82
GNE-201ENST00000377902 PDS5AQ29RF7 1337 aaKnown RBP20.16■□□□□ 0.82
GNE-201ENST00000377902 AGPSO00116 658 aa20.16■□□□□ 0.82
GNE-201ENST00000377902 STAG2Q8N3U4 1231 aa20.16■□□□□ 0.82
GNE-201ENST00000377902 TUBGCP2Q9BSJ2 902 aa20.16■□□□□ 0.82
GNE-201ENST00000377902 JAG2Q9Y219 1238 aa20.16■□□□□ 0.82
GNE-201ENST00000377902 BCL9O00512 1426 aa20.16■□□□□ 0.82
GNE-201ENST00000377902 LONP1P36776 959 aaKnown RBP20.16■□□□□ 0.82
GNE-201ENST00000377902 AARSP49588 968 aaKnown RBP eCLIP20.16■□□□□ 0.82
GNE-201ENST00000377902 TTI2Q6NXR4 508 aa20.16■□□□□ 0.82
GNE-201ENST00000377902 C3orf67Q6ZVT6 689 aa20.16■□□□□ 0.82
GNE-201ENST00000377902 BLIDQ8IZY5 108 aa20.16■□□□□ 0.82
GNE-201ENST00000377902 HPS3Q969F9 1004 aa20.16■□□□□ 0.82
GNE-201ENST00000377902 PCMTD1Q96MG8 357 aaPredicted RBP20.16■□□□□ 0.82
GNE-201ENST00000377902 DUSP9Q99956 384 aaKnown RBP20.16■□□□□ 0.82
GNE-201ENST00000377902 SELENOOQ9BVL4 669 aa20.16■□□□□ 0.82
GNE-201ENST00000377902 ACBD3Q9H3P7 528 aa20.16■□□□□ 0.82
GNE-201ENST00000377902 NHSL1Q5SYE7 1610 aa20.16■□□□□ 0.82
GNE-201ENST00000377902 TUBBP07437 444 aa20.15■□□□□ 0.82
GNE-201ENST00000377902 IDEP14735 1019 aa20.15■□□□□ 0.82
GNE-201ENST00000377902 KLRK1P26718 216 aa20.15■□□□□ 0.82
GNE-201ENST00000377902 PSMB7Q99436 277 aa20.15■□□□□ 0.82
GNE-201ENST00000377902 NIP7Q9Y221 180 aaKnown RBP eCLIP20.15■□□□□ 0.82
GNE-201ENST00000377902 ZNF263O14978 683 aa20.15■□□□□ 0.82
GNE-201ENST00000377902 TRAPPC10P48553 1259 aa20.15■□□□□ 0.82
GNE-201ENST00000377902 CSGALNACT2Q8N6G5 542 aa20.15■□□□□ 0.82
GNE-201ENST00000377902 BRIP1Q9BX63 1249 aa20.15■□□□□ 0.82
GNE-201ENST00000377902 TTYH3Q9C0H2 523 aa20.15■□□□□ 0.82
GNE-201ENST00000377902 EHD4Q9H223 541 aa20.15■□□□□ 0.82
GNE-201ENST00000377902 BTG4Q9NY30 223 aa20.15■□□□□ 0.82
GNE-201ENST00000377902 SMARCAL1Q9NZC9 954 aa20.15■□□□□ 0.82
GNE-201ENST00000377902 A0A1W2PQC6 194 aa20.14■□□□□ 0.82
GNE-201ENST00000377902 KRT86O43790 486 aa20.14■□□□□ 0.82
GNE-201ENST00000377902 FGRP09769 529 aa20.14■□□□□ 0.82
GNE-201ENST00000377902 TBC1D8BQ0IIM8 1120 aa20.14■□□□□ 0.82
GNE-201ENST00000377902 INF2Q27J81 1249 aa20.14■□□□□ 0.82
GNE-201ENST00000377902 DTHD1Q6ZMT9 781 aa20.14■□□□□ 0.82
GNE-201ENST00000377902 GOLGA6L1Q8N7Z2 621 aa20.14■□□□□ 0.82
GNE-201ENST00000377902 VIPAS39Q9H9C1 493 aa20.14■□□□□ 0.82
GNE-201ENST00000377902 MAGEC2Q9UBF1 373 aaPredicted RBP20.14■□□□□ 0.82
GNE-201ENST00000377902 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.14■□□□□ 0.82
GNE-201ENST00000377902 SRGNP10124 158 aa20.14■□□□□ 0.81
GNE-201ENST00000377902 ERCC3P19447 782 aa20.14■□□□□ 0.81
GNE-201ENST00000377902 EEF1GP26641 437 aaKnown RBP20.14■□□□□ 0.81
GNE-201ENST00000377902 KRT83P78385 493 aa20.14■□□□□ 0.81
GNE-201ENST00000377902 MEA1Q16626 185 aa20.14■□□□□ 0.81
GNE-201ENST00000377902 FKBP15Q5T1M5 1219 aa20.14■□□□□ 0.81
GNE-201ENST00000377902 ANKRD40Q6AI12 368 aa20.14■□□□□ 0.81
GNE-201ENST00000377902 INTS5Q6P9B9 1019 aaKnown RBP20.14■□□□□ 0.81
GNE-201ENST00000377902 CCNI2Q6ZMN8 369 aaPredicted RBP20.14■□□□□ 0.81
GNE-201ENST00000377902 PACS2Q86VP3 889 aa20.14■□□□□ 0.81
GNE-201ENST00000377902 EXOC1Q9NV70 894 aa20.14■□□□□ 0.81
GNE-201ENST00000377902 LRWD1Q9UFC0 647 aa20.14■□□□□ 0.81
GNE-201ENST00000377902 CACNA1SQ13698 1873 aa20.13■□□□□ 0.81
GNE-201ENST00000377902 MATR3P43243 847 aaKnown RBP eCLIP20.13■□□□□ 0.81
GNE-201ENST00000377902 ARL6IP4Q66PJ3 421 aaKnown RBP20.13■□□□□ 0.81
GNE-201ENST00000377902 RCSD1Q6JBY9 416 aa20.13■□□□□ 0.81
GNE-201ENST00000377902 RRP36Q96EU6 259 aaKnown RBP20.13■□□□□ 0.81
GNE-201ENST00000377902 THAP9Q9H5L6 903 aa20.13■□□□□ 0.81
GNE-201ENST00000377902 TAF1P21675 1872 aa20.13■□□□□ 0.81
GNE-201ENST00000377902 ZNF804BA4D1E1 1349 aa20.13■□□□□ 0.81
GNE-201ENST00000377902 TSPY2A6NKD2 308 aa20.13■□□□□ 0.81
GNE-201ENST00000377902 PSMA7O14818 248 aa20.13■□□□□ 0.81
GNE-201ENST00000377902 FCER1AP12319 257 aa20.13■□□□□ 0.81
GNE-201ENST00000377902 DNM2P50570 870 aa20.13■□□□□ 0.81
GNE-201ENST00000377902 GIMAP8Q8ND71 665 aaPredicted RBP20.13■□□□□ 0.81
GNE-201ENST00000377902 DCP1AQ9NPI6 582 aaPredicted RBP20.13■□□□□ 0.81
GNE-201ENST00000377902 EHD2Q9NZN4 543 aa20.13■□□□□ 0.81
GNE-201ENST00000377902 CXCR5P32302 372 aa20.12■□□□□ 0.81
GNE-201ENST00000377902 UBA7P41226 1012 aa20.12■□□□□ 0.81
GNE-201ENST00000377902 NOP2P46087 812 aaKnown RBP20.12■□□□□ 0.81
GNE-201ENST00000377902 SLC7A5Q01650 507 aa20.12■□□□□ 0.81
GNE-201ENST00000377902 STK4Q13043 487 aa20.12■□□□□ 0.81
GNE-201ENST00000377902 PYM1Q9BRP8 204 aaKnown RBP20.12■□□□□ 0.81
GNE-201ENST00000377902 MLXIPQ9HAP2 919 aa20.12■□□□□ 0.81
GNE-201ENST00000377902 MKRN1Q9UHC7 482 aaKnown RBP20.12■□□□□ 0.81
GNE-201ENST00000377902 CAPN6Q9Y6Q1 641 aa20.12■□□□□ 0.81
GNE-201ENST00000377902 NTSR2O95665 410 aa20.12■□□□□ 0.81
GNE-201ENST00000377902 MAP9Q49MG5 647 aa20.12■□□□□ 0.81
GNE-201ENST00000377902 SMARCC1Q92922 1105 aaPredicted RBP20.12■□□□□ 0.81
GNE-201ENST00000377902 CRACR2AQ9BSW2 395 aa20.12■□□□□ 0.81
GNE-201ENST00000377902 CYLC1P35663 651 aaPredicted RBP20.11■□□□□ 0.81
GNE-201ENST00000377902 MECOMQ03112 1051 aa20.11■□□□□ 0.81
GNE-201ENST00000377902 SLC35G1Q2M3R5 365 aa20.11■□□□□ 0.81
GNE-201ENST00000377902 CCDC178Q5BJE1 867 aa20.11■□□□□ 0.81
GNE-201ENST00000377902 TTC19Q6DKK2 380 aaPredicted RBP20.11■□□□□ 0.81
GNE-201ENST00000377902 FAM84BQ96KN1 310 aaPredicted RBP20.11■□□□□ 0.81
GNE-201ENST00000377902 CNOT6LQ96LI5 555 aaKnown RBP20.11■□□□□ 0.81
GNE-201ENST00000377902 LRRC1Q9BTT6 524 aa20.11■□□□□ 0.81
GNE-201ENST00000377902 DMGDHQ9UI17 866 aaKnown RBP20.11■□□□□ 0.81
GNE-201ENST00000377902 EPHB6O15197 1021 aa20.11■□□□□ 0.81
GNE-201ENST00000377902 RHOBTB3O94955 611 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms