RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 PSMB7Q99436 277 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 EIF3CQ99613 913 aaKnown RBP9.69□□□□□ -0.86
PCDH9-202ENST00000377865 DNAI2Q9GZS0 605 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 FAM114A2Q9NRY5 505 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.69□□□□□ -0.86
PCDH9-202ENST00000377865 HMGB1P1B2RPK0 211 aaPredicted RBP9.69□□□□□ -0.86
PCDH9-202ENST00000377865 ATP1A2P50993 1020 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 TSNAXIP1Q2TAA8 658 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 C10orf76Q5T2E6 689 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 FYB2Q5VWT5 728 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 NCAPH2Q6IBW4 605 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 TTLL7Q6ZT98 887 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 GRAMD1CQ8IYS0 662 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 PUS7LQ9H0K6 701 aaKnown RBP9.69□□□□□ -0.86
PCDH9-202ENST00000377865 PRDM4Q9UKN5 801 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 PCDHA4Q9UN74 947 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 ITIH6Q6UXX5 1313 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 PPFIBP2Q8ND30 876 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 CNOT10Q9H9A5 744 aaKnown RBP9.68□□□□□ -0.86
PCDH9-202ENST00000377865 TUBE1Q9UJT0 475 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 PRDM1O75626 825 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 HIBADHP31937 336 aaKnown RBP9.68□□□□□ -0.86
PCDH9-202ENST00000377865 GSTA5Q7RTV2 222 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 CCDC25Q86WR0 208 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 KCND1Q9NSA2 647 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 ATP6V0A2Q9Y487 856 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 CPDO75976 1380 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 PDE8BO95263 885 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 H2AFXP16104 143 aaPredicted RBP9.68□□□□□ -0.86
PCDH9-202ENST00000377865 SRLQ86TD4 932 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 KIFAP3Q92845 792 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 CPSF2Q9P2I0 782 aaKnown RBP9.68□□□□□ -0.86
PCDH9-202ENST00000377865 PCDHB6Q9Y5E3 794 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 ZNF609O15014 1411 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 KRIT1O00522 736 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 KCNK3O14649 394 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 RGS16O15492 202 aaPredicted RBP9.68□□□□□ -0.86
PCDH9-202ENST00000377865 IGKV5-2P06315 115 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 RNASE9P60153 205 aaKnown RBP9.68□□□□□ -0.86
PCDH9-202ENST00000377865 MAN2A1Q16706 1144 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 PBKQ96KB5 322 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 SETDB2Q96T68 719 aa9.68□□□□□ -0.86
PCDH9-202ENST00000377865 PUS3Q9BZE2 481 aaKnown RBP9.68□□□□□ -0.86
PCDH9-202ENST00000377865 IQCGQ9H095 443 aaKnown RBP9.68□□□□□ -0.86
PCDH9-202ENST00000377865 LUC7L3O95232 432 aaKnown RBP9.67□□□□□ -0.86
PCDH9-202ENST00000377865 USP14P54578 494 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 GUCY2DQ02846 1103 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 CMTR1Q8N1G2 835 aaKnown RBP9.67□□□□□ -0.86
PCDH9-202ENST00000377865 MAP3K15Q6ZN16 1313 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 STAMBPO95630 424 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 ATP2A2P16615 1042 aaKnown RBP9.67□□□□□ -0.86
PCDH9-202ENST00000377865 NNTQ13423 1086 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 MEX3CQ5U5Q3 659 aaKnown RBP9.67□□□□□ -0.86
PCDH9-202ENST00000377865 REXO1Q8N1G1 1221 aaKnown RBP9.67□□□□□ -0.86
PCDH9-202ENST00000377865 PCDHA13Q9Y5I0 950 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 BUB1O43683 1085 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 PTPN21Q16825 1174 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 DYMQ7RTS9 669 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 NEK8Q86SG6 692 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 STIM2Q9P246 746 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 CD163L1Q9NR16 1453 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 PRAMEF22A3QJZ6 481 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 TMED8Q6PL24 325 aaPredicted RBP9.67□□□□□ -0.86
PCDH9-202ENST00000377865 STAG1Q8WVM7 1258 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 HNRNPLLQ8WVV9 542 aaKnown RBP9.67□□□□□ -0.86
PCDH9-202ENST00000377865 RIC8AQ9NPQ8 531 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 SH3GLB2Q9NR46 395 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 HOMER3Q9NSC5 361 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 HEG1Q9ULI3 1381 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 LGALS16A8MUM7 142 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 HEXIM1O94992 359 aaKnown RBP9.67□□□□□ -0.86
PCDH9-202ENST00000377865 CCNE1P24864 410 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 NEDD9Q14511 834 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 SHC4Q6S5L8 630 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 ENGASEQ8NFI3 743 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 WDR66Q8TBY9 1149 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 TACO1Q9BSH4 297 aaKnown RBP9.67□□□□□ -0.86
PCDH9-202ENST00000377865 PRM3Q9NNZ6 103 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 UTYO14607 1347 aa9.67□□□□□ -0.86
PCDH9-202ENST00000377865 CLTCQ00610 1675 aaKnown RBP9.66□□□□□ -0.86
PCDH9-202ENST00000377865 A0A1B0GTH6 734 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 SMYD4Q8IYR2 804 aaPredicted RBP9.66□□□□□ -0.86
PCDH9-202ENST00000377865 SMC6Q96SB8 1091 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 PARP3Q9Y6F1 533 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 hCG_1642624A0A1W2PR95 340 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 CCDC169A6NNP5 214 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 SPOPO43791 374 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 CUL1Q13616 776 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 CCDC197Q8NCU1 140 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 KRT12Q99456 494 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 NLRC4Q9NPP4 1024 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.66□□□□□ -0.86
PCDH9-202ENST00000377865 NR1D1P20393 614 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 RASSF2P50749 326 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 STK17AQ9UEE5 414 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 RIPOR2Q9Y4F9 1068 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 SMCO2A6NFE2 343 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 KIF28PB7ZC32 967 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 GYS2P54840 703 aa9.66□□□□□ -0.86
PCDH9-202ENST00000377865 ZBTB16Q05516 673 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms