RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 FSD1Q9BTV5 496 aa22.84■■□□□ 1.25
TRAPPC3-204ENST00000373166 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.84■■□□□ 1.25
TRAPPC3-204ENST00000373166 MUC3AQ02505 3323 aa22.84■■□□□ 1.25
TRAPPC3-204ENST00000373166 TTC28Q96AY4 2481 aa22.83■■□□□ 1.25
TRAPPC3-204ENST00000373166 PARP14Q460N5 1801 aa22.83■■□□□ 1.25
TRAPPC3-204ENST00000373166 ZNFX1Q9P2E3 1918 aaKnown RBP22.83■■□□□ 1.25
TRAPPC3-204ENST00000373166 ARVCFO00192 962 aa22.83■■□□□ 1.25
TRAPPC3-204ENST00000373166 CCDC144BQ3MJ40 725 aa22.83■■□□□ 1.25
TRAPPC3-204ENST00000373166 SBK1Q52WX2 424 aa22.83■■□□□ 1.25
TRAPPC3-204ENST00000373166 GNASQ5JWF2 1037 aa22.83■■□□□ 1.25
TRAPPC3-204ENST00000373166 C16orf59Q7L2K0 433 aa22.83■■□□□ 1.25
TRAPPC3-204ENST00000373166 FBXO40Q9UH90 709 aa22.83■■□□□ 1.25
TRAPPC3-204ENST00000373166 A0A0U1RQG5 324 aaPredicted RBP22.82■■□□□ 1.24
TRAPPC3-204ENST00000373166 TNFRSF10AO00220 468 aa22.82■■□□□ 1.24
TRAPPC3-204ENST00000373166 TLR3O15455 904 aaKnown RBP22.82■■□□□ 1.24
TRAPPC3-204ENST00000373166 CSF2RAP15509 400 aa22.82■■□□□ 1.24
TRAPPC3-204ENST00000373166 RASA1P20936 1047 aa22.82■■□□□ 1.24
TRAPPC3-204ENST00000373166 GJA9P57773 515 aa22.82■■□□□ 1.24
TRAPPC3-204ENST00000373166 RASIP1Q5U651 963 aa22.82■■□□□ 1.24
TRAPPC3-204ENST00000373166 B4GALNT3Q6L9W6 998 aa22.82■■□□□ 1.24
TRAPPC3-204ENST00000373166 PSRC1Q6PGN9 363 aaPredicted RBP22.82■■□□□ 1.24
TRAPPC3-204ENST00000373166 KIFC2Q96AC6 838 aa22.82■■□□□ 1.24
TRAPPC3-204ENST00000373166 PBX4Q9BYU1 374 aa22.82■■□□□ 1.24
TRAPPC3-204ENST00000373166 LNPKQ9C0E8 428 aa22.82■■□□□ 1.24
TRAPPC3-204ENST00000373166 UPF3AQ9H1J1 476 aaKnown RBP22.82■■□□□ 1.24
TRAPPC3-204ENST00000373166 CLIP2Q9UDT6 1046 aa22.82■■□□□ 1.24
TRAPPC3-204ENST00000373166 MYH8P13535 1937 aa22.81■■□□□ 1.24
TRAPPC3-204ENST00000373166 BAZ2AQ9UIF9 1905 aaKnown RBP22.81■■□□□ 1.24
TRAPPC3-204ENST00000373166 COL11A1P12107 1806 aaPredicted RBP22.81■■□□□ 1.24
TRAPPC3-204ENST00000373166 IGHDP01880 384 aa22.81■■□□□ 1.24
TRAPPC3-204ENST00000373166 PBX2P40425 430 aa22.81■■□□□ 1.24
TRAPPC3-204ENST00000373166 IRX5P78411 483 aaPredicted RBP22.81■■□□□ 1.24
TRAPPC3-204ENST00000373166 IRX6P78412 446 aaPredicted RBP22.81■■□□□ 1.24
TRAPPC3-204ENST00000373166 GIMAP6Q6P9H5 292 aa22.81■■□□□ 1.24
TRAPPC3-204ENST00000373166 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.81■■□□□ 1.24
TRAPPC3-204ENST00000373166 STK11IPQ8N1F8 1099 aa22.81■■□□□ 1.24
TRAPPC3-204ENST00000373166 CHST13Q8NET6 341 aa22.81■■□□□ 1.24
TRAPPC3-204ENST00000373166 PPM1EQ8WY54 764 aa22.81■■□□□ 1.24
TRAPPC3-204ENST00000373166 STRBPQ96SI9 672 aaKnown RBP22.81■■□□□ 1.24
TRAPPC3-204ENST00000373166 SLC38A10Q9HBR0 1119 aa22.81■■□□□ 1.24
TRAPPC3-204ENST00000373166 RAVER2Q9HCJ3 691 aaKnown RBP22.81■■□□□ 1.24
TRAPPC3-204ENST00000373166 GRXCR1A8MXD5 290 aa22.8■■□□□ 1.24
TRAPPC3-204ENST00000373166 MINDY4BA8MYZ0 360 aa22.8■■□□□ 1.24
TRAPPC3-204ENST00000373166 ADCY6O43306 1168 aa22.8■■□□□ 1.24
TRAPPC3-204ENST00000373166 PDE1AP54750 535 aa22.8■■□□□ 1.24
TRAPPC3-204ENST00000373166 AKNAD1Q5T1N1 836 aa22.8■■□□□ 1.24
TRAPPC3-204ENST00000373166 ZNF365Q70YC5 407 aa22.8■■□□□ 1.24
TRAPPC3-204ENST00000373166 FAM126BQ8IXS8 530 aa22.8■■□□□ 1.24
TRAPPC3-204ENST00000373166 ATXN2LQ8WWM7 1075 aaKnown RBP22.8■■□□□ 1.24
TRAPPC3-204ENST00000373166 FEM1BQ9UK73 627 aa22.8■■□□□ 1.24
TRAPPC3-204ENST00000373166 PLXNA1Q9UIW2 1896 aa22.79■■□□□ 1.24
TRAPPC3-204ENST00000373166 ACRP10323 421 aa22.79■■□□□ 1.24
TRAPPC3-204ENST00000373166 OAZ1P54368 228 aa22.79■■□□□ 1.24
TRAPPC3-204ENST00000373166 ARMCX2Q7L311 632 aa22.79■■□□□ 1.24
TRAPPC3-204ENST00000373166 OSBP2Q969R2 916 aa22.79■■□□□ 1.24
TRAPPC3-204ENST00000373166 PPP1R12CQ9BZL4 782 aa22.79■■□□□ 1.24
TRAPPC3-204ENST00000373166 PRDM12Q9H4Q4 367 aa22.79■■□□□ 1.24
TRAPPC3-204ENST00000373166 ZNF287Q9HBT7 754 aa22.79■■□□□ 1.24
TRAPPC3-204ENST00000373166 MSRAQ9UJ68 235 aa22.79■■□□□ 1.24
TRAPPC3-204ENST00000373166 GSG1L2A8MUP6 293 aa22.78■■□□□ 1.24
TRAPPC3-204ENST00000373166 RAB30Q15771 203 aa22.78■■□□□ 1.24
TRAPPC3-204ENST00000373166 CHD1LQ86WJ1 897 aa22.78■■□□□ 1.24
TRAPPC3-204ENST00000373166 CCDC144CPQ8IYA2 1237 aa22.78■■□□□ 1.24
TRAPPC3-204ENST00000373166 ZNF444Q8N0Y2 327 aaPredicted RBP22.78■■□□□ 1.24
TRAPPC3-204ENST00000373166 MKL1Q969V6 931 aa22.78■■□□□ 1.24
TRAPPC3-204ENST00000373166 MTIF3Q9H2K0 278 aaKnown RBP22.78■■□□□ 1.24
TRAPPC3-204ENST00000373166 GPAA1O43292 621 aa22.77■■□□□ 1.24
TRAPPC3-204ENST00000373166 GNAT2P19087 354 aa22.77■■□□□ 1.24
TRAPPC3-204ENST00000373166 NKX3-2P78367 333 aa22.77■■□□□ 1.24
TRAPPC3-204ENST00000373166 NUCB1Q02818 461 aa22.77■■□□□ 1.24
TRAPPC3-204ENST00000373166 EVI5LQ96CN4 794 aa22.77■■□□□ 1.24
TRAPPC3-204ENST00000373166 FGD4Q96M96 766 aa22.77■■□□□ 1.24
TRAPPC3-204ENST00000373166 IL23AQ9NPF7 189 aa22.77■■□□□ 1.24
TRAPPC3-204ENST00000373166 THEGQ9P2T0 379 aa22.77■■□□□ 1.24
TRAPPC3-204ENST00000373166 SYNPO2Q9UMS6 1093 aa22.77■■□□□ 1.24
TRAPPC3-204ENST00000373166 IGKV6D-41A0A0C4DH26 115 aa22.76■■□□□ 1.23
TRAPPC3-204ENST00000373166 M0R2C6 588 aa22.76■■□□□ 1.23
TRAPPC3-204ENST00000373166 CD4P01730 458 aa22.76■■□□□ 1.23
TRAPPC3-204ENST00000373166 FDX1P10109 184 aa22.76■■□□□ 1.23
TRAPPC3-204ENST00000373166 CYP2C18P33260 490 aa22.76■■□□□ 1.23
TRAPPC3-204ENST00000373166 NOL8Q76FK4 1167 aaKnown RBP22.76■■□□□ 1.23
TRAPPC3-204ENST00000373166 HERVK_113Q902F9 699 aa22.76■■□□□ 1.23
TRAPPC3-204ENST00000373166 ASB2Q96Q27 587 aa22.76■■□□□ 1.23
TRAPPC3-204ENST00000373166 CABYRO75952 493 aa22.75■■□□□ 1.23
TRAPPC3-204ENST00000373166 TTLL1O95922 423 aa22.75■■□□□ 1.23
TRAPPC3-204ENST00000373166 FGBP02675 491 aa22.75■■□□□ 1.23
TRAPPC3-204ENST00000373166 TNFAIP2Q03169 654 aa22.75■■□□□ 1.23
TRAPPC3-204ENST00000373166 GMCL1P1Q8NEA9 526 aa22.75■■□□□ 1.23
TRAPPC3-204ENST00000373166 CEP95Q96GE4 821 aa22.75■■□□□ 1.23
TRAPPC3-204ENST00000373166 KATNBL1Q9H079 304 aa22.75■■□□□ 1.23
TRAPPC3-204ENST00000373166 HOMER2Q9NSB8 354 aa22.75■■□□□ 1.23
TRAPPC3-204ENST00000373166 MTMR4Q9NYA4 1195 aa22.75■■□□□ 1.23
TRAPPC3-204ENST00000373166 CTAGE5O15320 804 aa22.74■■□□□ 1.23
TRAPPC3-204ENST00000373166 BMP3P12645 472 aa22.74■■□□□ 1.23
TRAPPC3-204ENST00000373166 COL9A1P20849 921 aa22.74■■□□□ 1.23
TRAPPC3-204ENST00000373166 IGFBP4P22692 258 aa22.74■■□□□ 1.23
TRAPPC3-204ENST00000373166 TDO2P48775 406 aa22.74■■□□□ 1.23
TRAPPC3-204ENST00000373166 BEX3Q00994 111 aa22.74■■□□□ 1.23
TRAPPC3-204ENST00000373166 CNTN2Q02246 1040 aa22.74■■□□□ 1.23
TRAPPC3-204ENST00000373166 ZMYM1Q5SVZ6 1142 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms