RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 TNFAIP3P21580 790 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 RFC5P40937 340 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 TPM4P67936 248 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 SMAD3P84022 425 aaKnown RBP5.76□□□□□ -1.49
UBE3D-202ENST00000369746 CXCL9Q07325 125 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 FKBP15Q5T1M5 1219 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 SPRYD7Q5W111 196 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 ZNF530Q6P9A1 599 aaPredicted RBP5.76□□□□□ -1.49
UBE3D-202ENST00000369746 OTUD6AQ7L8S5 288 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 IFNL1Q8IU54 200 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 SLAIN1Q8ND83 568 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 HVCN1Q96D96 273 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 HOOK2Q96ED9 719 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 CDCA5Q96FF9 252 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 SERINC2Q96SA4 455 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.76□□□□□ -1.49
UBE3D-202ENST00000369746 FAM107BQ9H098 131 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 CCSER2Q9H7U1 834 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 VEZTQ9HBM0 779 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 NUP98P52948 1817 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 MAST2Q6P0Q8 1798 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 TAF1P21675 1872 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 LINC00854A0A1B0GVQ3 168 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 POTEB2H3BUK9 544 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 CHL1O00533 1208 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 TSPAN6O43657 245 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 NBNO60934 754 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 AGR2O95994 175 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 HCLS1P14317 486 aaPredicted RBP5.76□□□□□ -1.49
UBE3D-202ENST00000369746 NCBP1Q09161 790 aaKnown RBP5.76□□□□□ -1.49
UBE3D-202ENST00000369746 TMED1Q13445 227 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 FILIP1LQ4L180 1135 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 AP1ARQ63HQ0 302 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 DNAJC10Q8IXB1 793 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 SLC43A3Q8NBI5 491 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 TMEM87AQ8NBN3 555 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 SYAP1Q96A49 352 aaPredicted RBP5.76□□□□□ -1.49
UBE3D-202ENST00000369746 EIF2AK1Q9BQI3 630 aaKnown RBP5.76□□□□□ -1.49
UBE3D-202ENST00000369746 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.76□□□□□ -1.49
UBE3D-202ENST00000369746 OSBPL5Q9H0X9 879 aaPredicted RBP5.76□□□□□ -1.49
UBE3D-202ENST00000369746 SH3GLB2Q9NR46 395 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 ZNF446Q9NWS9 450 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 ZBTB1Q9Y2K1 713 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 PRKAB1Q9Y478 270 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 PCDHGB7Q9Y5F8 929 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 PCDHGA4Q9Y5G9 962 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 FAM221BA6H8Z2 402 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 COL9A1P20849 921 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 CA8P35219 290 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 RCAN1P53805 252 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 SH3BGRP55822 239 aaPredicted RBP5.75□□□□□ -1.49
UBE3D-202ENST00000369746 UBXN2AP68543 259 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 PDIA5Q14554 519 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 KIF22Q14807 665 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 PPP2R5AQ15172 486 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 PTPN14Q15678 1187 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 SLC5A9Q2M3M2 681 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 ANO1Q5XXA6 986 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 LEKR1Q6ZMV7 388 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 SYNE3Q6ZMZ3 975 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 KRT26Q7Z3Y9 468 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 MILR1Q7Z6M3 343 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 RBM12BQ8IXT5 1001 aaKnown RBP5.75□□□□□ -1.49
UBE3D-202ENST00000369746 ARL6IP6Q8N6S5 226 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 GIMAP8Q8ND71 665 aaPredicted RBP5.75□□□□□ -1.49
UBE3D-202ENST00000369746 FBXO18Q8NFZ0 1043 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 FAM212AQ96EL1 285 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 FAM81BQ96LP2 452 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 PRRX2Q99811 253 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 YIPF2Q9BWQ6 316 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 GLIS2Q9BZE0 524 aaPredicted RBP5.75□□□□□ -1.49
UBE3D-202ENST00000369746 ZNF277Q9NRM2 450 aaPredicted RBP5.75□□□□□ -1.49
UBE3D-202ENST00000369746 CNOT7Q9UIV1 285 aaKnown RBP5.75□□□□□ -1.49
UBE3D-202ENST00000369746 GTPBP10A4D1E9 387 aaKnown RBP5.75□□□□□ -1.49
UBE3D-202ENST00000369746 SNX2O60749 519 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 IMPDH2P12268 514 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 PRPHP41219 470 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 SP3Q02447 781 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 NSUN2Q08J23 767 aaKnown RBP eCLIP5.75□□□□□ -1.49
UBE3D-202ENST00000369746 EIF4A2Q14240 407 aaKnown RBP5.75□□□□□ -1.49
UBE3D-202ENST00000369746 BRDTQ58F21 947 aaPredicted RBP5.75□□□□□ -1.49
UBE3D-202ENST00000369746 FAM83BQ5T0W9 1011 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 GIMAP1Q8WWP7 306 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 STON2Q8WXE9 905 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 PGBD4Q96DM1 585 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 SLC12A5Q9H2X9 1139 aa5.75□□□□□ -1.49
UBE3D-202ENST00000369746 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.75□□□□□ -1.49
UBE3D-202ENST00000369746 ZNF804BA4D1E1 1349 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 K7ELQ4 463 aaPredicted RBP5.74□□□□□ -1.49
UBE3D-202ENST00000369746 PRPF3O43395 683 aaKnown RBP5.74□□□□□ -1.49
UBE3D-202ENST00000369746 SMC2O95347 1197 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 NCAM1P13591 858 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 UBA7P41226 1012 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 HIRAP54198 1017 aaPredicted RBP5.74□□□□□ -1.49
UBE3D-202ENST00000369746 UBASH3AP57075 661 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 FANCCQ00597 558 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 BIRC3Q13489 604 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 PKN1Q16512 942 aa5.74□□□□□ -1.49
UBE3D-202ENST00000369746 CDCA2Q69YH5 1023 aaPredicted RBP5.74□□□□□ -1.49
UBE3D-202ENST00000369746 PPP1R42Q7Z4L9 355 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms