RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 TRMT44Q8IYL2 757 aaKnown RBP26.25■■□□□ 1.79
ECHDC1-203ENST00000368291 MMP19Q99542 508 aa26.25■■□□□ 1.79
ECHDC1-203ENST00000368291 TMEM106CQ9BVX2 250 aa26.25■■□□□ 1.79
ECHDC1-203ENST00000368291 UBA5Q9GZZ9 404 aa26.25■■□□□ 1.79
ECHDC1-203ENST00000368291 LY9Q9HBG7 655 aa26.25■■□□□ 1.79
ECHDC1-203ENST00000368291 BAZ2BQ9UIF8 2168 aaKnown RBP26.24■■□□□ 1.79
ECHDC1-203ENST00000368291 REC8O95072 547 aa26.24■■□□□ 1.79
ECHDC1-203ENST00000368291 ZKSCAN1P17029 563 aaPredicted RBP26.24■■□□□ 1.79
ECHDC1-203ENST00000368291 MCM5P33992 734 aa26.24■■□□□ 1.79
ECHDC1-203ENST00000368291 HSPA4P34932 840 aa26.24■■□□□ 1.79
ECHDC1-203ENST00000368291 SART3Q15020 963 aaKnown RBP26.24■■□□□ 1.79
ECHDC1-203ENST00000368291 ASPRV1Q53RT3 343 aa26.24■■□□□ 1.79
ECHDC1-203ENST00000368291 STAG2Q8N3U4 1231 aa26.24■■□□□ 1.79
ECHDC1-203ENST00000368291 MTA3Q9BTC8 594 aa26.24■■□□□ 1.79
ECHDC1-203ENST00000368291 LCTP09848 1927 aa26.24■■□□□ 1.79
ECHDC1-203ENST00000368291 TAL1P17542 331 aaPredicted RBP26.23■■□□□ 1.79
ECHDC1-203ENST00000368291 CHST13Q8NET6 341 aa26.23■■□□□ 1.79
ECHDC1-203ENST00000368291 RNF208Q9H0X6 261 aa26.23■■□□□ 1.79
ECHDC1-203ENST00000368291 MCM3APO60318 1980 aa26.23■■□□□ 1.79
ECHDC1-203ENST00000368291 ICAM1P05362 532 aa26.22■■□□□ 1.79
ECHDC1-203ENST00000368291 PGK2P07205 417 aa26.22■■□□□ 1.79
ECHDC1-203ENST00000368291 PARP1P09874 1014 aaKnown RBP26.22■■□□□ 1.79
ECHDC1-203ENST00000368291 EN2P19622 333 aaPredicted RBP26.22■■□□□ 1.79
ECHDC1-203ENST00000368291 CACNB2Q08289 660 aaPredicted RBP26.22■■□□□ 1.79
ECHDC1-203ENST00000368291 TROAPQ12815 778 aa26.22■■□□□ 1.79
ECHDC1-203ENST00000368291 KCTD2Q14681 263 aa26.22■■□□□ 1.79
ECHDC1-203ENST00000368291 TMEM87BQ96K49 555 aa26.22■■□□□ 1.79
ECHDC1-203ENST00000368291 NEK1Q96PY6 1258 aa26.22■■□□□ 1.79
ECHDC1-203ENST00000368291 HOMER2Q9NSB8 354 aa26.22■■□□□ 1.79
ECHDC1-203ENST00000368291 MAD2L2Q9UI95 211 aa26.22■■□□□ 1.79
ECHDC1-203ENST00000368291 FRMPD3Q5JV73 1810 aa26.22■■□□□ 1.79
ECHDC1-203ENST00000368291 DNAJC25-GNG10A0A024R161 153 aa26.21■■□□□ 1.79
ECHDC1-203ENST00000368291 SH2B2O14492 632 aaPredicted RBP26.21■■□□□ 1.79
ECHDC1-203ENST00000368291 ZNF792Q3KQV3 632 aa26.21■■□□□ 1.79
ECHDC1-203ENST00000368291 OLFML2BQ68BL8 750 aa26.21■■□□□ 1.79
ECHDC1-203ENST00000368291 PAK6Q9NQU5 681 aaPredicted RBP26.21■■□□□ 1.79
ECHDC1-203ENST00000368291 RPTORQ8N122 1335 aa26.21■■□□□ 1.79
ECHDC1-203ENST00000368291 PALM3A6NDB9 673 aaPredicted RBP26.2■■□□□ 1.79
ECHDC1-203ENST00000368291 GJB1P08034 283 aa26.2■■□□□ 1.79
ECHDC1-203ENST00000368291 ALAS1P13196 640 aa26.2■■□□□ 1.79
ECHDC1-203ENST00000368291 PRKAR2AP13861 404 aaKnown RBP26.2■■□□□ 1.79
ECHDC1-203ENST00000368291 EXOSC10Q01780 885 aaKnown RBP26.2■■□□□ 1.79
ECHDC1-203ENST00000368291 GRM4Q14833 912 aa26.2■■□□□ 1.79
ECHDC1-203ENST00000368291 TKFCQ3LXA3 575 aa26.2■■□□□ 1.79
ECHDC1-203ENST00000368291 MUM1L1Q5H9M0 696 aa26.2■■□□□ 1.79
ECHDC1-203ENST00000368291 ADGRF4Q8IZF3 695 aa26.2■■□□□ 1.79
ECHDC1-203ENST00000368291 MAML3Q96JK9 1138 aa26.2■■□□□ 1.79
ECHDC1-203ENST00000368291 TRERF1Q96PN7 1200 aa26.2■■□□□ 1.79
ECHDC1-203ENST00000368291 LRRC2Q9BYS8 371 aa26.2■■□□□ 1.79
ECHDC1-203ENST00000368291 RNF146Q9NTX7 359 aa26.2■■□□□ 1.79
ECHDC1-203ENST00000368291 FBXO40Q9UH90 709 aa26.2■■□□□ 1.79
ECHDC1-203ENST00000368291 CCPG1Q9ULG6 757 aa26.2■■□□□ 1.79
ECHDC1-203ENST00000368291 SNX14Q9Y5W7 946 aa26.2■■□□□ 1.79
ECHDC1-203ENST00000368291 EPB41L2O43491 1005 aaKnown RBP26.2■■□□□ 1.78
ECHDC1-203ENST00000368291 SLC35G1Q2M3R5 365 aa26.2■■□□□ 1.78
ECHDC1-203ENST00000368291 SHISA4Q96DD7 197 aa26.2■■□□□ 1.78
ECHDC1-203ENST00000368291 USP26Q9BXU7 913 aa26.2■■□□□ 1.78
ECHDC1-203ENST00000368291 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.2■■□□□ 1.78
ECHDC1-203ENST00000368291 ACAD9Q9H845 621 aa26.2■■□□□ 1.78
ECHDC1-203ENST00000368291 KLRF2D3W0D1 207 aa26.19■■□□□ 1.78
ECHDC1-203ENST00000368291 CYP2C19P33261 490 aa26.19■■□□□ 1.78
ECHDC1-203ENST00000368291 LIFRP42702 1097 aa26.19■■□□□ 1.78
ECHDC1-203ENST00000368291 KRT32Q14532 448 aa26.19■■□□□ 1.78
ECHDC1-203ENST00000368291 HMX1Q9NP08 348 aaPredicted RBP26.19■■□□□ 1.78
ECHDC1-203ENST00000368291 SLC5A4Q9NY91 659 aa26.19■■□□□ 1.78
ECHDC1-203ENST00000368291 DIS3Q9Y2L1 958 aaKnown RBP26.19■■□□□ 1.78
ECHDC1-203ENST00000368291 GJA8P48165 433 aa26.18■■□□□ 1.78
ECHDC1-203ENST00000368291 MFSD14CQ5VZR4 134 aa26.18■■□□□ 1.78
ECHDC1-203ENST00000368291 ZNF654Q8IZM8 581 aa26.18■■□□□ 1.78
ECHDC1-203ENST00000368291 DDX11Q96FC9 970 aa26.18■■□□□ 1.78
ECHDC1-203ENST00000368291 TCEANC2Q96MN5 208 aa26.18■■□□□ 1.78
ECHDC1-203ENST00000368291 JMJD4Q9H9V9 463 aa26.18■■□□□ 1.78
ECHDC1-203ENST00000368291 A1CFQ9NQ94 594 aaKnown RBP26.18■■□□□ 1.78
ECHDC1-203ENST00000368291 MKI67P46013 3256 aaKnown RBP26.18■■□□□ 1.78
ECHDC1-203ENST00000368291 WDR19Q8NEZ3 1342 aa26.17■■□□□ 1.78
ECHDC1-203ENST00000368291 CCND3P30281 292 aaPredicted RBP26.17■■□□□ 1.78
ECHDC1-203ENST00000368291 DHX32Q7L7V1 743 aaKnown RBP26.17■■□□□ 1.78
ECHDC1-203ENST00000368291 CATIPQ7Z7H3 387 aa26.17■■□□□ 1.78
ECHDC1-203ENST00000368291 ANKRD35Q8N283 1001 aa26.17■■□□□ 1.78
ECHDC1-203ENST00000368291 TMTC2Q8N394 836 aa26.17■■□□□ 1.78
ECHDC1-203ENST00000368291 U2AF1L4Q8WU68 220 aaKnown RBP26.17■■□□□ 1.78
ECHDC1-203ENST00000368291 FGD4Q96M96 766 aa26.17■■□□□ 1.78
ECHDC1-203ENST00000368291 MYL10Q9BUA6 226 aa26.17■■□□□ 1.78
ECHDC1-203ENST00000368291 SGPL1O95470 568 aa26.16■■□□□ 1.78
ECHDC1-203ENST00000368291 CDC37Q16543 378 aaPredicted RBP26.16■■□□□ 1.78
ECHDC1-203ENST00000368291 TRPV1Q8NER1 839 aa26.16■■□□□ 1.78
ECHDC1-203ENST00000368291 MTMR8Q96EF0 704 aa26.16■■□□□ 1.78
ECHDC1-203ENST00000368291 DEFB118Q96PH6 123 aa26.16■■□□□ 1.78
ECHDC1-203ENST00000368291 DDAH1O94760 285 aa26.15■■□□□ 1.78
ECHDC1-203ENST00000368291 SGMS1Q86VZ5 419 aa26.15■■□□□ 1.78
ECHDC1-203ENST00000368291 CLEC4DQ8WXI8 215 aa26.15■■□□□ 1.78
ECHDC1-203ENST00000368291 MAP3K14Q99558 947 aa26.15■■□□□ 1.78
ECHDC1-203ENST00000368291 VAT1LQ9HCJ6 419 aa26.15■■□□□ 1.78
ECHDC1-203ENST00000368291 NFIBO00712 420 aa26.14■■□□□ 1.78
ECHDC1-203ENST00000368291 CYTH3O43739 400 aa26.14■■□□□ 1.78
ECHDC1-203ENST00000368291 CYBAP13498 195 aa26.14■■□□□ 1.78
ECHDC1-203ENST00000368291 CPA1P15085 419 aa26.14■■□□□ 1.78
ECHDC1-203ENST00000368291 QRICH1Q2TAL8 776 aa26.14■■□□□ 1.78
ECHDC1-203ENST00000368291 FAM133AQ8N9E0 248 aa26.14■■□□□ 1.78
ECHDC1-203ENST00000368291 NUP133Q8WUM0 1156 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms