RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 TOP1P11387 765 aaKnown RBP12.43□□□□□ -0.42
H3F3A-202ENST00000366814 TRAPPC10P48553 1259 aa12.43□□□□□ -0.42
H3F3A-202ENST00000366814 TOB1P50616 345 aaPredicted RBP12.43□□□□□ -0.42
H3F3A-202ENST00000366814 PICALMQ13492 652 aa12.43□□□□□ -0.42
H3F3A-202ENST00000366814 TNFAIP1Q13829 316 aa12.43□□□□□ -0.42
H3F3A-202ENST00000366814 PPP4R3BQ5MIZ7 849 aa12.43□□□□□ -0.42
H3F3A-202ENST00000366814 SHC4Q6S5L8 630 aa12.43□□□□□ -0.42
H3F3A-202ENST00000366814 OXER1Q8TDS5 423 aa12.43□□□□□ -0.42
H3F3A-202ENST00000366814 TMEM47Q9BQJ4 181 aa12.43□□□□□ -0.42
H3F3A-202ENST00000366814 MRIQ9BWK5 157 aa12.43□□□□□ -0.42
H3F3A-202ENST00000366814 USP40Q9NVE5 1235 aa12.43□□□□□ -0.42
H3F3A-202ENST00000366814 HPSEQ9Y251 543 aa12.43□□□□□ -0.42
H3F3A-202ENST00000366814 ZKSCAN5Q9Y2L8 839 aa12.43□□□□□ -0.42
H3F3A-202ENST00000366814 PPP2R3BQ9Y5P8 575 aa12.43□□□□□ -0.42
H3F3A-202ENST00000366814 PAPPA2Q9BXP8 1791 aa12.43□□□□□ -0.42
H3F3A-202ENST00000366814 TCP10L2B9ZVM9 353 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 ATP2B1P20020 1258 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 PTPREP23469 700 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 CTCFP49711 727 aaPredicted RBP12.42□□□□□ -0.42
H3F3A-202ENST00000366814 TPM4P67936 248 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 RASA3Q14644 834 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 SUPT20HL1Q3ZLR7 823 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 GALNT17Q6IS24 598 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 CCDC12Q8WUD4 166 aaPredicted RBP12.42□□□□□ -0.42
H3F3A-202ENST00000366814 KCNH3Q9ULD8 1083 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 PCDHB6Q9Y5E3 794 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 SRPRBQ9Y5M8 271 aaKnown RBP12.42□□□□□ -0.42
H3F3A-202ENST00000366814 PARP1P09874 1014 aaKnown RBP12.42□□□□□ -0.42
H3F3A-202ENST00000366814 TNNI2P48788 182 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 COL13A1Q5TAT6 717 aaPredicted RBP12.42□□□□□ -0.42
H3F3A-202ENST00000366814 KANK3Q6NY19 840 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.42□□□□□ -0.42
H3F3A-202ENST00000366814 ELOA2Q8IYF1 753 aaPredicted RBP12.42□□□□□ -0.42
H3F3A-202ENST00000366814 CNNM3Q8NE01 707 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 FERMT2Q96AC1 680 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 ZDHHC15Q96MV8 337 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 TRIM5Q9C035 493 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 TMOD2Q9NZR1 351 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 MAD2L2Q9UI95 211 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 PLIN4Q96Q06 1357 aa12.42□□□□□ -0.42
H3F3A-202ENST00000366814 FAM155AB1AL88 458 aaPredicted RBP12.41□□□□□ -0.42
H3F3A-202ENST00000366814 PPP1R12BO60237 982 aaPredicted RBP12.41□□□□□ -0.42
H3F3A-202ENST00000366814 NLRP12P59046 1061 aa12.41□□□□□ -0.42
H3F3A-202ENST00000366814 NBPF12Q5TAG4 269 aaPredicted RBP12.41□□□□□ -0.42
H3F3A-202ENST00000366814 CLIC6Q96NY7 704 aa12.41□□□□□ -0.42
H3F3A-202ENST00000366814 ZIC5Q96T25 663 aa12.41□□□□□ -0.42
H3F3A-202ENST00000366814 BPIFA3Q9BQP9 254 aa12.41□□□□□ -0.42
H3F3A-202ENST00000366814 SERPINB13Q9UIV8 391 aa12.41□□□□□ -0.42
H3F3A-202ENST00000366814 FBXO2Q9UK22 296 aaPredicted RBP12.41□□□□□ -0.42
H3F3A-202ENST00000366814 PALM3A6NDB9 673 aaPredicted RBP12.4□□□□□ -0.42
H3F3A-202ENST00000366814 SLC10A3P09131 477 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 SMARCA1P28370 1054 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 LBX1P52954 281 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 TTC38Q5R3I4 469 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 C11orf57Q6ZUT1 292 aaPredicted RBP12.4□□□□□ -0.42
H3F3A-202ENST00000366814 BLIDQ8IZY5 108 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 PIBF1Q8WXW3 757 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 SPZ1Q9BXG8 430 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 SEC63Q9UGP8 760 aaKnown RBP12.4□□□□□ -0.42
H3F3A-202ENST00000366814 PCDHA4Q9UN74 947 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 FZD1Q9UP38 647 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 MTMR7Q9Y216 660 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 SMTNL1A8MU46 457 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 KLRF2D3W0D1 207 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 CACNB3P54284 484 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 PDAP1Q13442 181 aaKnown RBP12.4□□□□□ -0.42
H3F3A-202ENST00000366814 IQCB1Q15051 598 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 CDC42EP5Q6NZY7 148 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 KRBA2Q6ZNG9 492 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 DRC7Q8IY82 874 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 STAG2Q8N3U4 1231 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 RRP36Q96EU6 259 aaKnown RBP12.4□□□□□ -0.42
H3F3A-202ENST00000366814 CEP95Q96GE4 821 aa12.4□□□□□ -0.42
H3F3A-202ENST00000366814 PYM1Q9BRP8 204 aaKnown RBP12.4□□□□□ -0.42
H3F3A-202ENST00000366814 OSBPL5Q9H0X9 879 aaPredicted RBP12.4□□□□□ -0.42
H3F3A-202ENST00000366814 CCDC194A0A1B0GVG4 234 aa12.39□□□□□ -0.43
H3F3A-202ENST00000366814 GABPAQ06546 454 aa12.39□□□□□ -0.43
H3F3A-202ENST00000366814 APOBEC3HQ6NTF7 200 aaKnown RBP12.39□□□□□ -0.43
H3F3A-202ENST00000366814 SARM1Q6SZW1 724 aa12.39□□□□□ -0.43
H3F3A-202ENST00000366814 HEATR3Q7Z4Q2 680 aa12.39□□□□□ -0.43
H3F3A-202ENST00000366814 RASAL3Q86YV0 1011 aa12.39□□□□□ -0.43
H3F3A-202ENST00000366814 IFNL1Q8IU54 200 aa12.39□□□□□ -0.43
H3F3A-202ENST00000366814 TNFRSF25Q93038 417 aa12.39□□□□□ -0.43
H3F3A-202ENST00000366814 TMEM39BQ9GZU3 492 aa12.39□□□□□ -0.43
H3F3A-202ENST00000366814 EHD4Q9H223 541 aa12.39□□□□□ -0.43
H3F3A-202ENST00000366814 DHX36Q9H2U1 1008 aaKnown RBP12.39□□□□□ -0.43
H3F3A-202ENST00000366814 THSD7BQ9C0I4 1608 aa12.39□□□□□ -0.43
H3F3A-202ENST00000366814 hCG_1984214I3L0E3 225 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 ZNF500O60304 480 aaPredicted RBP12.38□□□□□ -0.43
H3F3A-202ENST00000366814 HSPA8P11142 646 aaKnown RBP12.38□□□□□ -0.43
H3F3A-202ENST00000366814 IREB2P48200 963 aaKnown RBP12.38□□□□□ -0.43
H3F3A-202ENST00000366814 ASPRV1Q53RT3 343 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 PIK3AP1Q6ZUJ8 805 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 ZNF713Q8N859 430 aaPredicted RBP12.38□□□□□ -0.43
H3F3A-202ENST00000366814 DAGLBQ8NCG7 672 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 SHISA4Q96DD7 197 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 SLC10A4Q96EP9 437 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 CCDC17Q96LX7 622 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 TRIM34Q9BYJ4 488 aa12.38□□□□□ -0.43
H3F3A-202ENST00000366814 PRDM10Q9NQV6 1147 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms