RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 CUL4BQ13620 913 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 FAM43BQ6ZT52 329 aaPredicted RBP12.69□□□□□ -0.38
CNOT3-202ENST00000358389 C2CD5Q86YS7 1000 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 OR2W6PQ8NHA6 318 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 TMOD3Q9NYL9 352 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 SNX12Q9UMY4 172 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 PLAAQ9Y263 795 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 USP6P35125 1406 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 NCAPD2Q15021 1401 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 MMP1P03956 469 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 GKAP1Q5VSY0 366 aaPredicted RBP12.69□□□□□ -0.38
CNOT3-202ENST00000358389 TBC1D1Q86TI0 1168 aaPredicted RBP12.69□□□□□ -0.38
CNOT3-202ENST00000358389 NSMCE1Q8WV22 266 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 KIDINS220Q9ULH0 1771 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 DLC1Q96QB1 1528 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 ITIH6Q6UXX5 1313 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 GMNCA6NCL1 334 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 UBAP1LF5GYI3 381 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 FAM153BP0C7A2 387 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 IL15P40933 162 aaPredicted RBP12.69□□□□□ -0.38
CNOT3-202ENST00000358389 PTPROQ16827 1216 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 FAM153CQ494X1 144 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 ZFYVE27Q5T4F4 411 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 FNBP4Q8N3X1 1017 aaPredicted RBP12.69□□□□□ -0.38
CNOT3-202ENST00000358389 MB21D1Q8N884 522 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 CEP120Q8N960 986 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 TBC1D22AQ8WUA7 517 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 APPBP2Q92624 585 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 HVCN1Q96D96 273 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 SAAL1Q96ER3 474 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 ATP6V1G3Q96LB4 118 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 OSBPL9Q96SU4 736 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 MMRN2Q9H8L6 949 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 FAM153AQ9UHL3 310 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 SH2B2O14492 632 aaPredicted RBP12.68□□□□□ -0.38
CNOT3-202ENST00000358389 ACCSLQ4AC99 568 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 TAX1BP1Q86VP1 789 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 RBM12Q9NTZ6 932 aaKnown RBP12.68□□□□□ -0.38
CNOT3-202ENST00000358389 SMIM23A6NLE4 172 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 SEMA3EO15041 775 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 TCP1P17987 556 aaKnown RBP12.68□□□□□ -0.38
CNOT3-202ENST00000358389 ADORA1P30542 326 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 CTDSPL2Q05D32 466 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 KCTD19Q17RG1 926 aaPredicted RBP12.68□□□□□ -0.38
CNOT3-202ENST00000358389 NT5DC1Q5TFE4 455 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 KDM7AQ6ZMT4 941 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 TBC1D10CQ8IV04 446 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 PUS3Q9BZE2 481 aaKnown RBP12.68□□□□□ -0.38
CNOT3-202ENST00000358389 CCDC113Q9H0I3 377 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 OVOS2A0A0J9YW53 1432 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 OVOS2Q6IE36 1432 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 A0A087X0B3 334 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 FAM237AA0A1B0GTK4 181 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 ANO9A1A5B4 782 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 ZFYP08048 801 aaPredicted RBP12.68□□□□□ -0.38
CNOT3-202ENST00000358389 CTNNA1P35221 906 aaKnown RBP12.68□□□□□ -0.38
CNOT3-202ENST00000358389 MAGEA1P43355 309 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 CCDC63Q8NA47 563 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 STAMBPL1Q96FJ0 436 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 TSGA10Q9BZW7 698 aa12.68□□□□□ -0.38
CNOT3-202ENST00000358389 LIMA1Q9UHB6 759 aaKnown RBP12.68□□□□□ -0.38
CNOT3-202ENST00000358389 PHF20L1A8MW92 1017 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 KIF3CO14782 793 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 PRDM1O75626 825 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 RASSF9O75901 435 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 IGHMBP2P38935 993 aaKnown RBP12.67□□□□□ -0.38
CNOT3-202ENST00000358389 KLK7P49862 253 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 CFAP221Q4G0U5 840 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 SELENOSQ9BQE4 189 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 FAM207AQ9NSI2 230 aaPredicted RBP12.67□□□□□ -0.38
CNOT3-202ENST00000358389 CAPN6Q9Y6Q1 641 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 XRN1Q8IZH2 1706 aaKnown RBP12.67□□□□□ -0.38
CNOT3-202ENST00000358389 RBBP5Q15291 538 aaKnown RBP12.67□□□□□ -0.38
CNOT3-202ENST00000358389 FAM133BQ5BKY9 247 aaKnown RBP12.67□□□□□ -0.38
CNOT3-202ENST00000358389 IFNL2Q8IZJ0 200 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 FAM167BQ9BTA0 163 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 L3MBTL1Q9Y468 752 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 ARAP3Q8WWN8 1544 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 TLDC2A0PJX2 215 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 ZNF233A6NK53 670 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 TOM1O60784 492 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 MCM7P33993 719 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 CAPRIN2Q6IMN6 1127 aaKnown RBP12.67□□□□□ -0.38
CNOT3-202ENST00000358389 MMGT1Q8N4V1 131 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 ABCC6O95255 1503 aa12.67□□□□□ -0.38
CNOT3-202ENST00000358389 AP1G2O75843 785 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 SCTRP47872 440 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 RFX5P48382 616 aaPredicted RBP12.66□□□□□ -0.38
CNOT3-202ENST00000358389 WTAPQ15007 396 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 CREG2Q8IUH2 290 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 CSGALNACT2Q8N6G5 542 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 SEC16BQ96JE7 1060 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 NOD2Q9HC29 1040 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 CWC25Q9NXE8 425 aaPredicted RBP12.66□□□□□ -0.38
CNOT3-202ENST00000358389 RWDD2AQ9UIY3 292 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 NOVA2Q9UNW9 492 aaKnown RBP12.66□□□□□ -0.38
CNOT3-202ENST00000358389 PSMA7O14818 248 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 SNRPA1P09661 255 aaKnown RBP12.66□□□□□ -0.38
CNOT3-202ENST00000358389 STAT6P42226 847 aa12.66□□□□□ -0.38
CNOT3-202ENST00000358389 KCNB1Q14721 858 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms