RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 KIF28PB7ZC32 967 aa14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 PPP6R2O75170 966 aa14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 NPM3O75607 178 aaKnown RBP14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 TNNI2P48788 182 aa14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 MYL5Q02045 173 aa14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 NEDD1Q8NHV4 660 aa14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 PHKBQ93100 1093 aa14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 DEFB129Q9H1M3 183 aa14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 EHD4Q9H223 541 aa14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 RAD21O60216 631 aa14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 ATP1A3P13637 1013 aa14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 JAG1P78504 1218 aa14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 TBX2Q13207 712 aaPredicted RBP14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 FAM83AQ86UY5 434 aa14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 HOMER1Q86YM7 354 aa14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 FOXP4Q8IVH2 680 aaPredicted RBP14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 KAT14Q9H8E8 782 aa14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 VWA3AA6NCI4 1184 aa14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 UBE2Q2LH0YL09 131 aa14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 BIN1O00499 593 aa14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 ZSCAN12O43309 604 aa14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 UBASH3AP57075 661 aa14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 IRX5P78411 483 aaPredicted RBP14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 CATIPQ7Z7H3 387 aa14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 LRRC47Q8N1G4 583 aaKnown RBP14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 TMTC2Q8N394 836 aa14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 TMEM47Q9BQJ4 181 aa14.38□□□□□ -0.11
RTFDC1-202ENST00000357348 MYH4Q9Y623 1939 aa14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 ARHGAP6O43182 974 aa14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 TNFAIP1Q13829 316 aa14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 NBPF12Q5TAG4 269 aaPredicted RBP14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 PNMA1Q8ND90 353 aa14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 FAM217BQ9NTX9 383 aaPredicted RBP14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 GOLGA6L9A6NEM1 432 aa14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 GLTPD2A6NH11 291 aa14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 MAP3K9P80192 1104 aa14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 PRKG1Q13976 671 aa14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 PTPAQ15257 358 aa14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 RTN1Q16799 776 aa14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 EAPPQ56P03 285 aaPredicted RBP14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 FKBP1CQ5VVH2 108 aa14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 FANCBQ8NB91 859 aa14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 MNS1Q8NEH6 495 aa14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 TEPSINQ96N21 525 aa14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 ADARB2Q9NS39 739 aaKnown RBP14.37□□□□□ -0.11
RTFDC1-202ENST00000357348 A0A0U1RQG5 324 aaPredicted RBP14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 hCG_1642624A0A1W2PR95 340 aa14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 TBC1D8O95759 1140 aa14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 GH2P01242 217 aa14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 GOLGA8HP0CJ92 632 aa14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 SYKP43405 635 aa14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 TROAPQ12815 778 aa14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 SEPT2Q15019 361 aa14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 ABCB5Q2M3G0 1257 aa14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 TATDN1Q6P1N9 297 aa14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 RSRC2Q7L4I2 434 aaKnown RBP14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 CCDC84Q86UT8 332 aaPredicted RBP14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 DGKHQ86XP1 1220 aa14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 GPR161Q8N6U8 529 aaKnown RBP14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 MTA3Q9BTC8 594 aa14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 CARD6Q9BX69 1037 aa14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 MTMR4Q9NYA4 1195 aa14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 PGAP2Q9UHJ9 254 aa14.36□□□□□ -0.11
RTFDC1-202ENST00000357348 MMP14P50281 582 aa14.35□□□□□ -0.11
RTFDC1-202ENST00000357348 RESP18Q5W5W9 173 aa14.35□□□□□ -0.11
RTFDC1-202ENST00000357348 SHC4Q6S5L8 630 aa14.35□□□□□ -0.11
RTFDC1-202ENST00000357348 GJB4Q9NTQ9 266 aa14.35□□□□□ -0.11
RTFDC1-202ENST00000357348 INTS13Q9NVM9 706 aa14.35□□□□□ -0.11
RTFDC1-202ENST00000357348 PPP2R2CQ9Y2T4 447 aa14.35□□□□□ -0.11
RTFDC1-202ENST00000357348 ERICH4A6NGS2 130 aa14.35□□□□□ -0.11
RTFDC1-202ENST00000357348 PLEKHA8P1O95397 391 aa14.35□□□□□ -0.11
RTFDC1-202ENST00000357348 MUM1L1Q5H9M0 696 aa14.35□□□□□ -0.11
RTFDC1-202ENST00000357348 TEX35Q5T0J7 233 aa14.35□□□□□ -0.11
RTFDC1-202ENST00000357348 CC2D1AQ6P1N0 951 aaPredicted RBP14.35□□□□□ -0.11
RTFDC1-202ENST00000357348 ZNF526Q8TF50 670 aaPredicted RBP14.35□□□□□ -0.11
RTFDC1-202ENST00000357348 MAP3K14Q99558 947 aa14.35□□□□□ -0.11
RTFDC1-202ENST00000357348 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-202ENST00000357348 TCP11L1Q9NUJ3 509 aa14.35□□□□□ -0.11
RTFDC1-202ENST00000357348 HERC5Q9UII4 1024 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-202ENST00000357348 URI1O94763 535 aaPredicted RBP14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 TOP1P11387 765 aaKnown RBP14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 EPHX2P34913 555 aa14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 HNRNPH2P55795 449 aaKnown RBP14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 STAG2Q8N3U4 1231 aa14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 JMYQ8N9B5 988 aa14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 AIFM3Q96NN9 605 aa14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 SLC26A6Q9BXS9 759 aa14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 CPVLQ9H3G5 476 aa14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 MRFAP1Q9Y605 127 aa14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 MYH6P13533 1939 aa14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 ADM5C9JUS6 153 aa14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 STX10O60499 249 aa14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 SASH3O75995 380 aa14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 SERPINC1P01008 464 aa14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 NTRK3Q16288 839 aa14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 METTL16Q86W50 562 aaKnown RBP14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 CTCFLQ8NI51 663 aaPredicted RBP14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 COL2A1P02458 1487 aaPredicted RBP14.34□□□□□ -0.11
RTFDC1-202ENST00000357348 TMEM232C9JQI7 657 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms