RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 PRLRP16471 622 aa11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 ATF3P18847 181 aa11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 MAP3K12Q12852 859 aa11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 TMED8Q6PL24 325 aaPredicted RBP11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 GIGYF2Q6Y7W6 1299 aaKnown RBP11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 MFSD6Q6ZSS7 791 aa11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 TAX1BP1Q86VP1 789 aa11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 PARP9Q8IXQ6 854 aa11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 IFNL3Q8IZI9 196 aa11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 CRACR2BQ8N4Y2 399 aaPredicted RBP11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 RNPC3Q96LT9 517 aaKnown RBP11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 RNF26Q9BY78 433 aaPredicted RBP11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 PIH1D3Q9NQM4 214 aaKnown RBP11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 STRN4Q9NRL3 753 aa11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 ZSWIM5Q9P217 1185 aa11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 BCORQ6W2J9 1755 aa11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 SHANK3Q9BYB0 1731 aa11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 RTL9Q8NET4 1388 aa11.51□□□□□ -0.57
CHRNA1-202ENST00000348749 SPATA31A3Q5VYP0 1347 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 MROH5Q6ZUA9 1318 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 ZNF185O15231 689 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 IDH1O75874 414 aaKnown RBP11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 NEBLO76041 1014 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 PAX7P23759 505 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 SLC8A1P32418 973 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 CTSWP56202 376 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 SLC8A3P57103 927 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 IFFO1Q0D2I5 559 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 SEMA3FQ13275 785 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 WTAPQ15007 396 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 MEA1Q16626 185 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 NBPF20Q3BBV1 942 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 TCP11X2Q5H9J9 407 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 RNF187Q5TA31 235 aaPredicted RBP11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 KIAA1328Q86T90 577 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 NLRP14Q86W24 1093 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 CREG2Q8IUH2 290 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 TTLL11Q8NHH1 800 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 LPIN2Q92539 896 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 PAGE5Q96GU1 130 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 ZIM3Q96PE6 472 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 CCT8L2Q96SF2 557 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 LRRC1Q9BTT6 524 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 CSRNP2Q9H175 543 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 DMGDHQ9UI17 866 aaKnown RBP11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 RWDD2AQ9UIY3 292 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 SNX12Q9UMY4 172 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 CTNND2Q9UQB3 1225 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 A0A1W2PQC6 194 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 TRIM75PA6NK02 468 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 IDEP14735 1019 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 ITGA6P23229 1130 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 CYLC1P35663 651 aaPredicted RBP11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 PUM3Q15397 648 aaKnown RBP11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 ZKSCAN8Q15776 578 aaPredicted RBP11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 PPP4R3AQ6IN85 833 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 CYB5D1Q6P9G0 228 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 PI16Q6UXB8 463 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 FUKQ8N0W3 1084 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 SGSM3Q96HU1 749 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 VPS16Q9H269 839 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 CNNM1Q9NRU3 951 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 CAPN11Q9UMQ6 739 aa11.5□□□□□ -0.57
CHRNA1-202ENST00000348749 TTC26A0AVF1 554 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 KCNJ18B7U540 433 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 RXRAP19793 462 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 NR1D1P20393 614 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 FGFR2P21802 821 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 MDH1P40925 334 aaKnown RBP11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 ATP1A2P50993 1020 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 GRIK3Q13003 919 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 KCNJ12Q14500 433 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 WDR59Q6PJI9 974 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 USP49Q70CQ1 688 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 FAM228AQ86W67 206 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 CCDC170Q8IYT3 715 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 IQCKQ8N0W5 287 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 MREGQ8N565 214 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 SH2D3CQ8N5H7 860 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 HDAC7Q8WUI4 952 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 TSGA10Q9BZW7 698 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 SENP2Q9HC62 589 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 TAB2Q9NYJ8 693 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 STIM2Q9P246 746 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 LUC7L2Q9Y383 392 aaKnown RBP11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 PCDHB6Q9Y5E3 794 aa11.49□□□□□ -0.57
CHRNA1-202ENST00000348749 MYH13Q9UKX3 1938 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 A0A087X0B3 334 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 STARD3NLO95772 234 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 CLNS1AP54105 237 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 HDLBPQ00341 1268 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 IFT88Q13099 833 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 EZH2Q15910 746 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 TSR1Q2NL82 804 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 GLE1Q53GS7 698 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 HAUS3Q68CZ6 603 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 CCDC121Q6ZUS5 278 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 MAB21L3Q8N8X9 362 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 SPATA4Q8NEY3 305 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 FAM89AQ96GI7 184 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms