RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 VAT1LQ9HCJ6 419 aa24.1■■□□□ 1.45
PTPN18-202ENST00000347849 STXBP3O00186 592 aa24.1■■□□□ 1.45
PTPN18-202ENST00000347849 MCM7P33993 719 aa24.1■■□□□ 1.45
PTPN18-202ENST00000347849 SHMT1P34896 483 aa24.1■■□□□ 1.45
PTPN18-202ENST00000347849 GNAQP50148 359 aa24.1■■□□□ 1.45
PTPN18-202ENST00000347849 SHROOM1Q2M3G4 852 aaPredicted RBP24.1■■□□□ 1.45
PTPN18-202ENST00000347849 MTMR4Q9NYA4 1195 aa24.1■■□□□ 1.45
PTPN18-202ENST00000347849 SERPINB13Q9UIV8 391 aa24.1■■□□□ 1.45
PTPN18-202ENST00000347849 FRMPD2Q68DX3 1309 aaPredicted RBP24.1■■□□□ 1.45
PTPN18-202ENST00000347849 IL17AQ16552 155 aa24.09■■□□□ 1.45
PTPN18-202ENST00000347849 PCDHA4Q9UN74 947 aa24.09■■□□□ 1.45
PTPN18-202ENST00000347849 M0R2N6 131 aa24.09■■□□□ 1.45
PTPN18-202ENST00000347849 ARHGAP6O43182 974 aa24.09■■□□□ 1.45
PTPN18-202ENST00000347849 C21orf2O43822 256 aa24.09■■□□□ 1.45
PTPN18-202ENST00000347849 PARP1P09874 1014 aaKnown RBP24.09■■□□□ 1.45
PTPN18-202ENST00000347849 STRIP1Q5VSL9 837 aa24.09■■□□□ 1.45
PTPN18-202ENST00000347849 TMEM139Q8IV31 216 aa24.09■■□□□ 1.45
PTPN18-202ENST00000347849 GNG11P61952 73 aa24.08■■□□□ 1.45
PTPN18-202ENST00000347849 SYMPKQ92797 1274 aaKnown RBP24.08■■□□□ 1.45
PTPN18-202ENST00000347849 INTS13Q9NVM9 706 aa24.08■■□□□ 1.45
PTPN18-202ENST00000347849 ACTN4O43707 911 aaKnown RBP24.08■■□□□ 1.45
PTPN18-202ENST00000347849 CREBRFQ8IUR6 639 aa24.08■■□□□ 1.45
PTPN18-202ENST00000347849 CNKSR1Q969H4 720 aa24.08■■□□□ 1.45
PTPN18-202ENST00000347849 ZDHHC15Q96MV8 337 aa24.08■■□□□ 1.45
PTPN18-202ENST00000347849 WDR24Q96S15 920 aa24.08■■□□□ 1.45
PTPN18-202ENST00000347849 BAG1Q99933 345 aaPredicted RBP24.08■■□□□ 1.45
PTPN18-202ENST00000347849 DNAJC18Q9H819 358 aa24.08■■□□□ 1.45
PTPN18-202ENST00000347849 BARHL2Q9NY43 387 aa24.08■■□□□ 1.45
PTPN18-202ENST00000347849 CALCOCO1Q9P1Z2 691 aa24.08■■□□□ 1.45
PTPN18-202ENST00000347849 CASQ1P31415 396 aa24.07■■□□□ 1.44
PTPN18-202ENST00000347849 RBM5P52756 815 aaKnown RBP eCLIP24.07■■□□□ 1.44
PTPN18-202ENST00000347849 ATP2C1P98194 919 aaPredicted RBP24.07■■□□□ 1.44
PTPN18-202ENST00000347849 FCHSD1Q86WN1 690 aa24.07■■□□□ 1.44
PTPN18-202ENST00000347849 PCDHA6Q9UN73 950 aa24.07■■□□□ 1.44
PTPN18-202ENST00000347849 PCDHA8Q9Y5H6 950 aa24.07■■□□□ 1.44
PTPN18-202ENST00000347849 IGKV6D-41A0A0C4DH26 115 aa24.07■■□□□ 1.44
PTPN18-202ENST00000347849 TPM1P09493 284 aa24.07■■□□□ 1.44
PTPN18-202ENST00000347849 PDHBP11177 359 aa24.07■■□□□ 1.44
PTPN18-202ENST00000347849 SH3GLB2Q9NR46 395 aa24.07■■□□□ 1.44
PTPN18-202ENST00000347849 UTRNP46939 3433 aa24.07■■□□□ 1.44
PTPN18-202ENST00000347849 YDJCA8MPS7 323 aa24.06■■□□□ 1.44
PTPN18-202ENST00000347849 ADKP55263 362 aaKnown RBP24.06■■□□□ 1.44
PTPN18-202ENST00000347849 DHX58Q96C10 678 aa24.06■■□□□ 1.44
PTPN18-202ENST00000347849 PIGSQ96S52 555 aa24.06■■□□□ 1.44
PTPN18-202ENST00000347849 SPZ1Q9BXG8 430 aa24.06■■□□□ 1.44
PTPN18-202ENST00000347849 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.06■■□□□ 1.44
PTPN18-202ENST00000347849 DDTLA6NHG4 134 aaPredicted RBP24.06■■□□□ 1.44
PTPN18-202ENST00000347849 CALML3P27482 149 aa24.06■■□□□ 1.44
PTPN18-202ENST00000347849 CASP1P29466 404 aa24.06■■□□□ 1.44
PTPN18-202ENST00000347849 POSTNQ15063 836 aa24.06■■□□□ 1.44
PTPN18-202ENST00000347849 FAM198AQ9UFP1 575 aa24.06■■□□□ 1.44
PTPN18-202ENST00000347849 RGPD3A6NKT7 1758 aaPredicted RBP24.06■■□□□ 1.44
PTPN18-202ENST00000347849 RGPD4Q7Z3J3 1758 aa24.06■■□□□ 1.44
PTPN18-202ENST00000347849 CDK11BP21127 795 aaKnown RBP24.05■■□□□ 1.44
PTPN18-202ENST00000347849 SH3BP5LQ7L8J4 393 aa24.05■■□□□ 1.44
PTPN18-202ENST00000347849 ZCCHC17Q9NP64 241 aaKnown RBP24.05■■□□□ 1.44
PTPN18-202ENST00000347849 MAP3K9P80192 1104 aa24.05■■□□□ 1.44
PTPN18-202ENST00000347849 C4orf32Q8N8J7 132 aa24.05■■□□□ 1.44
PTPN18-202ENST00000347849 PLIN4Q96Q06 1357 aa24.05■■□□□ 1.44
PTPN18-202ENST00000347849 TEX35Q5T0J7 233 aa24.04■■□□□ 1.44
PTPN18-202ENST00000347849 TOGARAM2Q6ZUX3 1019 aa24.04■■□□□ 1.44
PTPN18-202ENST00000347849 SASH3O75995 380 aa24.04■■□□□ 1.44
PTPN18-202ENST00000347849 CDC25AP30304 524 aa24.04■■□□□ 1.44
PTPN18-202ENST00000347849 HNRNPH2P55795 449 aaKnown RBP24.04■■□□□ 1.44
PTPN18-202ENST00000347849 INF2Q27J81 1249 aa24.04■■□□□ 1.44
PTPN18-202ENST00000347849 MAN1B1Q9UKM7 699 aa24.04■■□□□ 1.44
PTPN18-202ENST00000347849 TBX2Q13207 712 aaPredicted RBP24.03■■□□□ 1.44
PTPN18-202ENST00000347849 FERMT2Q96AC1 680 aa24.03■■□□□ 1.44
PTPN18-202ENST00000347849 LZTS2Q9BRK4 669 aa24.03■■□□□ 1.44
PTPN18-202ENST00000347849 MPHOSPH10O00566 681 aaKnown RBP24.03■■□□□ 1.44
PTPN18-202ENST00000347849 MYO1BO43795 1136 aa24.03■■□□□ 1.44
PTPN18-202ENST00000347849 TRAPPC10P48553 1259 aa24.03■■□□□ 1.44
PTPN18-202ENST00000347849 IRX5P78411 483 aaPredicted RBP24.03■■□□□ 1.44
PTPN18-202ENST00000347849 GPCPD1Q9NPB8 672 aa24.03■■□□□ 1.44
PTPN18-202ENST00000347849 TMEM51Q9NW97 253 aa24.03■■□□□ 1.44
PTPN18-202ENST00000347849 TBC1D8O95759 1140 aa24.02■■□□□ 1.44
PTPN18-202ENST00000347849 AFMP43652 599 aa24.02■■□□□ 1.44
PTPN18-202ENST00000347849 PPP2R3AQ06190 1150 aa24.02■■□□□ 1.44
PTPN18-202ENST00000347849 CC2D1AQ6P1N0 951 aaPredicted RBP24.02■■□□□ 1.44
PTPN18-202ENST00000347849 TC2NQ8N9U0 490 aa24.02■■□□□ 1.44
PTPN18-202ENST00000347849 NFE2L3Q9Y4A8 694 aa24.02■■□□□ 1.44
PTPN18-202ENST00000347849 PPIP5K2O43314 1243 aa24.02■■□□□ 1.44
PTPN18-202ENST00000347849 STX10O60499 249 aa24.02■■□□□ 1.44
PTPN18-202ENST00000347849 SARSP49591 514 aaKnown RBP24.02■■□□□ 1.44
PTPN18-202ENST00000347849 NAPAP54920 295 aa24.02■■□□□ 1.44
PTPN18-202ENST00000347849 ATP2B2Q01814 1243 aa24.02■■□□□ 1.44
PTPN18-202ENST00000347849 GPR161Q8N6U8 529 aaKnown RBP24.02■■□□□ 1.44
PTPN18-202ENST00000347849 STAMQ92783 540 aa24.02■■□□□ 1.44
PTPN18-202ENST00000347849 TMEM60Q9H2L4 133 aa24.02■■□□□ 1.44
PTPN18-202ENST00000347849 ZNF646O15015 1829 aaPredicted RBP24.01■■□□□ 1.43
PTPN18-202ENST00000347849 CCDC194A0A1B0GVG4 234 aa24.01■■□□□ 1.43
PTPN18-202ENST00000347849 FMR1Q06787 632 aaKnown RBP eCLIP24.01■■□□□ 1.43
PTPN18-202ENST00000347849 SPECC1LQ69YQ0 1117 aa24.01■■□□□ 1.43
PTPN18-202ENST00000347849 TTBK2Q6IQ55 1244 aa24.01■■□□□ 1.43
PTPN18-202ENST00000347849 CCDC34Q96HJ3 373 aa24.01■■□□□ 1.43
PTPN18-202ENST00000347849 ZMYND12Q9H0C1 365 aa24.01■■□□□ 1.43
PTPN18-202ENST00000347849 TDRD3Q9H7E2 651 aaKnown RBP24.01■■□□□ 1.43
PTPN18-202ENST00000347849 SWAP70Q9UH65 585 aa24.01■■□□□ 1.43
PTPN18-202ENST00000347849 ATP8B1O43520 1251 aa24.01■■□□□ 1.43
PTPN18-202ENST00000347849 BMP15O95972 392 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms