RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 GADL1Q6ZQY3 521 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 USP48Q86UV5 1035 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 PLEKHM2Q8IWE5 1019 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 DCPSQ96C86 337 aaKnown RBP12.93□□□□□ -0.34
TRAF3-201ENST00000347662 BAIAP2L1Q9UHR4 511 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 CDV3Q9UKY7 258 aaKnown RBP12.93□□□□□ -0.34
TRAF3-201ENST00000347662 ZNF532Q9HCE3 1301 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 LRMPQ12912 555 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 LRRC23Q53EV4 343 aaPredicted RBP12.93□□□□□ -0.34
TRAF3-201ENST00000347662 C1orf228Q6PIY5 440 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 APPBP2Q92624 585 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 MYL10Q9BUA6 226 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 POLR3CQ9BUI4 534 aaPredicted RBP12.93□□□□□ -0.34
TRAF3-201ENST00000347662 TRAPPC10P48553 1259 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 PPP2R3AQ06190 1150 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 EDC3Q96F86 508 aaKnown RBP12.93□□□□□ -0.34
TRAF3-201ENST00000347662 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.93□□□□□ -0.343e-14■■■■■ 27.4
TRAF3-201ENST00000347662 NEURL1BA8MQ27 555 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 PFDN1O60925 122 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 LMNB1P20700 586 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 RAB44Q7Z6P3 723 aaPredicted RBP12.93□□□□□ -0.34
TRAF3-201ENST00000347662 FAN1Q9Y2M0 1017 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 CAVIN2O95810 425 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 HOOK2Q96ED9 719 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 FAM47AQ5JRC9 791 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 RASSF4Q9H2L5 321 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRAF3-201ENST00000347662 IFNB1P01574 187 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 HIF1AQ16665 826 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 NLRP7Q8WX94 980 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 MRPL44Q9H9J2 332 aaKnown RBP12.92□□□□□ -0.34
TRAF3-201ENST00000347662 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.92□□□□□ -0.34
TRAF3-201ENST00000347662 CEP104O60308 925 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 SERPINI2O75830 405 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 CHMLP26374 656 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 UVSSAQ2YD98 709 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 HS1BP3Q53T59 392 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 TBC1D32Q96NH3 1257 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 PPP1R9AQ9ULJ8 1098 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 MROH5Q6ZUA9 1318 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 AKR1B15C9JRZ8 316 aaPredicted RBP12.92□□□□□ -0.34
TRAF3-201ENST00000347662 DKC1O60832 514 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRAF3-201ENST00000347662 STAM2O75886 525 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 ARHGAP44Q17R89 818 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 ABI1Q8IZP0 508 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 TRPC6Q9Y210 931 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 PER1O15534 1290 aaPredicted RBP12.92□□□□□ -0.34
TRAF3-201ENST00000347662 ZBED4O75132 1171 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 WBP4O75554 376 aaKnown RBP12.92□□□□□ -0.34
TRAF3-201ENST00000347662 PHBP35232 272 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 BCAMP50895 628 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 NOLC1Q14978 699 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRAF3-201ENST00000347662 V9GY48 417 aaPredicted RBP12.92□□□□□ -0.34
TRAF3-201ENST00000347662 CLRN2A0PK11 232 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 H3BRJ5 948 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 TUBB4BP68371 445 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 TRIM59Q8IWR1 403 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 RDH13Q8NBN7 331 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 CNKSR1Q969H4 720 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 DAAM1Q9Y4D1 1078 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 SPTLC2O15270 562 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 TMEM259Q4ZIN3 620 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 MICAL1Q8TDZ2 1067 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 GLG1Q92896 1179 aa12.92□□□□□ -0.34
TRAF3-201ENST00000347662 MMTAG2Q9BU76 263 aaKnown RBP12.92□□□□□ -0.34
TRAF3-201ENST00000347662 BCRP11274 1271 aa12.91□□□□□ -0.34
TRAF3-201ENST00000347662 STX2P32856 288 aa12.91□□□□□ -0.34
TRAF3-201ENST00000347662 TBC1D8BQ0IIM8 1120 aa12.91□□□□□ -0.34
TRAF3-201ENST00000347662 KAZNQ674X7 775 aa12.91□□□□□ -0.34
TRAF3-201ENST00000347662 TBC1D22AQ8WUA7 517 aa12.91□□□□□ -0.34
TRAF3-201ENST00000347662 ZBTB1Q9Y2K1 713 aa12.91□□□□□ -0.34
TRAF3-201ENST00000347662 EFCAB6Q5THR3 1501 aa12.91□□□□□ -0.34
TRAF3-201ENST00000347662 ZBTB7BO15156 539 aaPredicted RBP12.91□□□□□ -0.34
TRAF3-201ENST00000347662 NCOA5Q9HCD5 579 aaKnown RBP12.91□□□□□ -0.34
TRAF3-201ENST00000347662 GDAP1Q8TB36 358 aa12.91□□□□□ -0.34
TRAF3-201ENST00000347662 CCPG1Q9ULG6 757 aa12.91□□□□□ -0.34
TRAF3-201ENST00000347662 BNIP3LO60238 219 aa12.91□□□□□ -0.34
TRAF3-201ENST00000347662 CCDC85BQ15834 202 aaPredicted RBP12.91□□□□□ -0.34
TRAF3-201ENST00000347662 CNNM4Q6P4Q7 775 aa12.91□□□□□ -0.34
TRAF3-201ENST00000347662 CFAP61Q8NHU2 1237 aa12.91□□□□□ -0.34
TRAF3-201ENST00000347662 ZNF653Q96CK0 615 aa12.91□□□□□ -0.34
TRAF3-201ENST00000347662 HOXB7P09629 217 aa12.91□□□□□ -0.34
TRAF3-201ENST00000347662 LONP1P36776 959 aaKnown RBP12.9□□□□□ -0.34
TRAF3-201ENST00000347662 TRMT10CQ7L0Y3 403 aaKnown RBP12.9□□□□□ -0.34
TRAF3-201ENST00000347662 APOL6Q9BWW8 343 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 KIF1BO60333 1816 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 EEF1DP29692 281 aaKnown RBP12.9□□□□□ -0.34
TRAF3-201ENST00000347662 LONRF3Q496Y0 759 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 TMCO5AQ8N6Q1 288 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 P3H4Q92791 437 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 ABTB1Q969K4 478 aaPredicted RBP12.9□□□□□ -0.34
TRAF3-201ENST00000347662 SYNDIG1Q9H7V2 258 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 SLC5A4Q9NY91 659 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 HACD3Q9P035 362 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 MAD1L1Q9Y6D9 718 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 ATF7P17544 494 aaPredicted RBP12.9□□□□□ -0.34
TRAF3-201ENST00000347662 TFAP4Q01664 338 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 CABS1Q96KC9 395 aa12.9□□□□□ -0.34
TRAF3-201ENST00000347662 GARSP41250 739 aaKnown RBP12.9□□□□□ -0.34
TRAF3-201ENST00000347662 TNFAIP1Q13829 316 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms