RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 TSPY3P0CV98 308 aa13.03□□□□□ -0.32
UBE2A-201ENST00000346330 TSPY8P0CW00 308 aa13.03□□□□□ -0.32
UBE2A-201ENST00000346330 BMP3P12645 472 aa13.03□□□□□ -0.32
UBE2A-201ENST00000346330 MCCP23508 829 aa13.03□□□□□ -0.32
UBE2A-201ENST00000346330 COPB2P35606 906 aa13.03□□□□□ -0.32
UBE2A-201ENST00000346330 RRP1P56182 461 aaKnown RBP13.03□□□□□ -0.32
UBE2A-201ENST00000346330 FAAP100Q0VG06 881 aa13.03□□□□□ -0.32
UBE2A-201ENST00000346330 ACVR2BQ13705 512 aa13.03□□□□□ -0.32
UBE2A-201ENST00000346330 KCNA10Q16322 511 aa13.03□□□□□ -0.32
UBE2A-201ENST00000346330 TMEM63BQ5T3F8 832 aa13.03□□□□□ -0.32
UBE2A-201ENST00000346330 KCTD1Q719H9 257 aa13.03□□□□□ -0.32
UBE2A-201ENST00000346330 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.03□□□□□ -0.32
UBE2A-201ENST00000346330 RNF180Q86T96 592 aa13.03□□□□□ -0.32
UBE2A-201ENST00000346330 PURBQ96QR8 312 aaKnown RBP13.03□□□□□ -0.32
UBE2A-201ENST00000346330 TTYH1Q9H313 450 aaPredicted RBP13.03□□□□□ -0.32
UBE2A-201ENST00000346330 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.03□□□□□ -0.32
UBE2A-201ENST00000346330 FEM1BQ9UK73 627 aa13.03□□□□□ -0.32
UBE2A-201ENST00000346330 SYNGAP1Q96PV0 1343 aa13.03□□□□□ -0.32
UBE2A-201ENST00000346330 SMCHD1A6NHR9 2005 aa13.03□□□□□ -0.32
UBE2A-201ENST00000346330 SOWAHBA6NEL2 793 aa13.02□□□□□ -0.33
UBE2A-201ENST00000346330 CCDC144BQ3MJ40 725 aa13.02□□□□□ -0.33
UBE2A-201ENST00000346330 MUM1L1Q5H9M0 696 aa13.02□□□□□ -0.33
UBE2A-201ENST00000346330 ARMCX2Q7L311 632 aa13.02□□□□□ -0.33
UBE2A-201ENST00000346330 CCDC144CPQ8IYA2 1237 aa13.02□□□□□ -0.33
UBE2A-201ENST00000346330 ANKRD35Q8N283 1001 aa13.02□□□□□ -0.33
UBE2A-201ENST00000346330 FAM227BQ96M60 508 aa13.02□□□□□ -0.33
UBE2A-201ENST00000346330 A1CFQ9NQ94 594 aaKnown RBP13.02□□□□□ -0.33
UBE2A-201ENST00000346330 FAM184BQ9ULE4 1060 aa13.02□□□□□ -0.33
UBE2A-201ENST00000346330 ISY1Q9ULR0 285 aaKnown RBP13.02□□□□□ -0.33
UBE2A-201ENST00000346330 MTMR7Q9Y216 660 aa13.02□□□□□ -0.33
UBE2A-201ENST00000346330 A0A0D9SFI3 127 aa13.01□□□□□ -0.33
UBE2A-201ENST00000346330 KIAA0355O15063 1070 aa13.01□□□□□ -0.33
UBE2A-201ENST00000346330 ERC2O15083 957 aa13.01□□□□□ -0.33
UBE2A-201ENST00000346330 PDE4BQ07343 736 aa13.01□□□□□ -0.33
UBE2A-201ENST00000346330 ANKRD45Q5TZF3 282 aa13.01□□□□□ -0.33
UBE2A-201ENST00000346330 FAM109BQ6ICB4 259 aaPredicted RBP13.01□□□□□ -0.33
UBE2A-201ENST00000346330 ZNF467Q7Z7K2 595 aaPredicted RBP13.01□□□□□ -0.33
UBE2A-201ENST00000346330 MSL3Q8N5Y2 521 aaKnown RBP13.01□□□□□ -0.33
UBE2A-201ENST00000346330 FAM133AQ8N9E0 248 aa13.01□□□□□ -0.33
UBE2A-201ENST00000346330 GMCL1Q96IK5 515 aa13.01□□□□□ -0.33
UBE2A-201ENST00000346330 NACAP1Q9BZK3 213 aa13.01□□□□□ -0.33
UBE2A-201ENST00000346330 STARD7Q9NQZ5 370 aa13.01□□□□□ -0.33
UBE2A-201ENST00000346330 SYNPO2Q9UMS6 1093 aa13.01□□□□□ -0.33
UBE2A-201ENST00000346330 STX8Q9UNK0 236 aa13.01□□□□□ -0.33
UBE2A-201ENST00000346330 ZNFX1Q9P2E3 1918 aaKnown RBP13□□□□□ -0.33
UBE2A-201ENST00000346330 PLXNA1Q9UIW2 1896 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 DUSP11O75319 330 aaKnown RBP13□□□□□ -0.33
UBE2A-201ENST00000346330 ASGR1P07306 291 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 SLC1A4P43007 532 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 STAT2P52630 851 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 OAZ1P54368 228 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 BEX3Q00994 111 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 TTBK2Q6IQ55 1244 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 CCDC174Q6PII3 467 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 ANKRD33Q7Z3H0 272 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 ZNF589Q86UQ0 364 aaPredicted RBP13□□□□□ -0.33
UBE2A-201ENST00000346330 CHST13Q8NET6 341 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 STAG1Q8WVM7 1258 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 CDX2Q99626 313 aaPredicted RBP13□□□□□ -0.33
UBE2A-201ENST00000346330 TSEN34Q9BSV6 310 aaKnown RBP13□□□□□ -0.33
UBE2A-201ENST00000346330 SEMA6BQ9H3T3 888 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 ZNF287Q9HBT7 754 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 PDGFCQ9NRA1 345 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 RNF146Q9NTX7 359 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 TMEM39AQ9NV64 488 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 TBX21Q9UL17 535 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 PRR12Q9ULL5 1215 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 REV3LO60673 3130 aa13□□□□□ -0.33
UBE2A-201ENST00000346330 TSPY2A6NKD2 308 aa12.99□□□□□ -0.33
UBE2A-201ENST00000346330 C6orf222P0C671 652 aaPredicted RBP12.99□□□□□ -0.33
UBE2A-201ENST00000346330 ALAS1P13196 640 aa12.99□□□□□ -0.33
UBE2A-201ENST00000346330 RAG1P15918 1043 aa12.99□□□□□ -0.33
UBE2A-201ENST00000346330 CST5P28325 142 aaPredicted RBP12.99□□□□□ -0.33
UBE2A-201ENST00000346330 SLC16A2P36021 539 aa12.99□□□□□ -0.33
UBE2A-201ENST00000346330 NOVP48745 357 aa12.99□□□□□ -0.33
UBE2A-201ENST00000346330 CDK7P50613 346 aa12.99□□□□□ -0.33
UBE2A-201ENST00000346330 PDE1AP54750 535 aa12.99□□□□□ -0.33
UBE2A-201ENST00000346330 IKQ13123 557 aaPredicted RBP12.99□□□□□ -0.33
UBE2A-201ENST00000346330 ZNF697Q5TEC3 545 aa12.99□□□□□ -0.33
UBE2A-201ENST00000346330 C16orf59Q7L2K0 433 aa12.99□□□□□ -0.33
UBE2A-201ENST00000346330 COL25A1Q9BXS0 654 aaPredicted RBP12.99□□□□□ -0.33
UBE2A-201ENST00000346330 UPF3AQ9H1J1 476 aaKnown RBP12.99□□□□□ -0.33
UBE2A-201ENST00000346330 ABHD16BQ9H3Z7 469 aa12.99□□□□□ -0.33
UBE2A-201ENST00000346330 ACAD9Q9H845 621 aa12.99□□□□□ -0.33
UBE2A-201ENST00000346330 CHD7Q9P2D1 2997 aa12.99□□□□□ -0.33
UBE2A-201ENST00000346330 ANAPC4Q9UJX5 808 aa12.99□□□□□ -0.33
UBE2A-201ENST00000346330 CTDP1Q9Y5B0 961 aaPredicted RBP12.99□□□□□ -0.33
UBE2A-201ENST00000346330 RBAK-RBAKDNI3L0D1 243 aa12.98□□□□□ -0.33
UBE2A-201ENST00000346330 RANBP6O60518 1105 aaKnown RBP12.98□□□□□ -0.33
UBE2A-201ENST00000346330 FGAP02671 866 aa12.98□□□□□ -0.33
UBE2A-201ENST00000346330 GJA9P57773 515 aa12.98□□□□□ -0.33
UBE2A-201ENST00000346330 LRRFIP1Q32MZ4 808 aaKnown RBP12.98□□□□□ -0.33
UBE2A-201ENST00000346330 RCSD1Q6JBY9 416 aa12.98□□□□□ -0.33
UBE2A-201ENST00000346330 EEPD1Q7L9B9 569 aa12.98□□□□□ -0.33
UBE2A-201ENST00000346330 MYLIPQ8WY64 445 aa12.98□□□□□ -0.33
UBE2A-201ENST00000346330 RNPC3Q96LT9 517 aaKnown RBP12.98□□□□□ -0.33
UBE2A-201ENST00000346330 TOX2Q96NM4 488 aa12.98□□□□□ -0.33
UBE2A-201ENST00000346330 TRERF1Q96PN7 1200 aa12.98□□□□□ -0.33
UBE2A-201ENST00000346330 FBXO40Q9UH90 709 aa12.98□□□□□ -0.33
UBE2A-201ENST00000346330 LRRC37A2A6NM11 1700 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms