RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 LENG1Q96BZ8 264 aaPredicted RBP18.9■□□□□ 0.62
RAB5C-201ENST00000346213 PAWRQ96IZ0 340 aaKnown RBP18.9■□□□□ 0.62
RAB5C-201ENST00000346213 PURBQ96QR8 312 aaKnown RBP18.9■□□□□ 0.62
RAB5C-201ENST00000346213 RNF41Q9H4P4 317 aaPredicted RBP18.9■□□□□ 0.62
RAB5C-201ENST00000346213 UPF2Q9HAU5 1272 aaKnown RBP18.9■□□□□ 0.62
RAB5C-201ENST00000346213 RBM8AQ9Y5S9 174 aaKnown RBP18.9■□□□□ 0.62
RAB5C-201ENST00000346213 PFASO15067 1338 aa18.9■□□□□ 0.62
RAB5C-201ENST00000346213 SMCHD1A6NHR9 2005 aa18.9■□□□□ 0.62
RAB5C-201ENST00000346213 LCTP09848 1927 aa18.9■□□□□ 0.62
RAB5C-201ENST00000346213 ZNF543Q08ER8 600 aa18.89■□□□□ 0.61
RAB5C-201ENST00000346213 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.89■□□□□ 0.61
RAB5C-201ENST00000346213 ZSCAN10Q96SZ4 725 aaPredicted RBP18.89■□□□□ 0.61
RAB5C-201ENST00000346213 GPHNQ9NQX3 736 aaPredicted RBP18.89■□□□□ 0.61
RAB5C-201ENST00000346213 ZBED4O75132 1171 aa18.89■□□□□ 0.61
RAB5C-201ENST00000346213 CNTN2Q02246 1040 aa18.89■□□□□ 0.61
RAB5C-201ENST00000346213 CHST3Q7LGC8 479 aa18.89■□□□□ 0.61
RAB5C-201ENST00000346213 ANKS1AQ92625 1134 aa18.89■□□□□ 0.61
RAB5C-201ENST00000346213 RANBP17Q9H2T7 1088 aaKnown RBP18.89■□□□□ 0.61
RAB5C-201ENST00000346213 E7EWF7 191 aa18.88■□□□□ 0.61
RAB5C-201ENST00000346213 ADCY6O43306 1168 aa18.88■□□□□ 0.61
RAB5C-201ENST00000346213 IKQ13123 557 aaPredicted RBP18.88■□□□□ 0.61
RAB5C-201ENST00000346213 FAM160B2Q86V87 743 aa18.88■□□□□ 0.61
RAB5C-201ENST00000346213 TRMT44Q8IYL2 757 aaKnown RBP18.88■□□□□ 0.61
RAB5C-201ENST00000346213 CTNNA3Q9UI47 895 aa18.88■□□□□ 0.61
RAB5C-201ENST00000346213 ZNFX1Q9P2E3 1918 aaKnown RBP18.88■□□□□ 0.61
RAB5C-201ENST00000346213 PLXNA1Q9UIW2 1896 aa18.87■□□□□ 0.61
RAB5C-201ENST00000346213 PTGS1P23219 599 aa18.87■□□□□ 0.61
RAB5C-201ENST00000346213 SYDE2Q5VT97 1194 aa18.87■□□□□ 0.61
RAB5C-201ENST00000346213 MFSD14CQ5VZR4 134 aa18.87■□□□□ 0.61
RAB5C-201ENST00000346213 DGKHQ86XP1 1220 aa18.87■□□□□ 0.61
RAB5C-201ENST00000346213 PNMA1Q8ND90 353 aa18.87■□□□□ 0.61
RAB5C-201ENST00000346213 TTC14Q96N46 770 aa18.87■□□□□ 0.61
RAB5C-201ENST00000346213 UBA5Q9GZZ9 404 aa18.87■□□□□ 0.61
RAB5C-201ENST00000346213 A1CFQ9NQ94 594 aaKnown RBP18.87■□□□□ 0.61
RAB5C-201ENST00000346213 SNAI1O95863 264 aaPredicted RBP18.86■□□□□ 0.61
RAB5C-201ENST00000346213 OAZ1P54368 228 aa18.86■□□□□ 0.61
RAB5C-201ENST00000346213 IRX5P78411 483 aaPredicted RBP18.86■□□□□ 0.61
RAB5C-201ENST00000346213 KCTD2Q14681 263 aa18.86■□□□□ 0.61
RAB5C-201ENST00000346213 MB21D2Q8IYB1 491 aaPredicted RBP18.86■□□□□ 0.61
RAB5C-201ENST00000346213 STAG2Q8N3U4 1231 aa18.86■□□□□ 0.61
RAB5C-201ENST00000346213 CHURC1Q8WUH1 139 aa18.86■□□□□ 0.61
RAB5C-201ENST00000346213 RNF146Q9NTX7 359 aa18.86■□□□□ 0.61
RAB5C-201ENST00000346213 DDX20Q9UHI6 824 aaKnown RBP18.86■□□□□ 0.61
RAB5C-201ENST00000346213 SOWAHBA6NEL2 793 aa18.85■□□□□ 0.61
RAB5C-201ENST00000346213 ZNF865P0CJ78 1059 aaPredicted RBP18.85■□□□□ 0.61
RAB5C-201ENST00000346213 COL6A1P12109 1028 aa18.85■□□□□ 0.61
RAB5C-201ENST00000346213 PRPF38BQ5VTL8 546 aaKnown RBP18.85■□□□□ 0.61
RAB5C-201ENST00000346213 POTEDQ86YR6 584 aa18.85■□□□□ 0.61
RAB5C-201ENST00000346213 RUFY2Q8WXA3 655 aa18.85■□□□□ 0.61
RAB5C-201ENST00000346213 TBC1D32Q96NH3 1257 aa18.85■□□□□ 0.61
RAB5C-201ENST00000346213 U3KPZ7 1027 aaPredicted RBP18.85■□□□□ 0.61
RAB5C-201ENST00000346213 LRRC37A2A6NM11 1700 aa18.85■□□□□ 0.61
RAB5C-201ENST00000346213 NFIBO00712 420 aa18.85■□□□□ 0.61
RAB5C-201ENST00000346213 ALAS1P13196 640 aa18.85■□□□□ 0.61
RAB5C-201ENST00000346213 PPP4R3BQ5MIZ7 849 aa18.85■□□□□ 0.61
RAB5C-201ENST00000346213 TINF2Q9BSI4 451 aa18.85■□□□□ 0.61
RAB5C-201ENST00000346213 KATNBL1Q9H079 304 aa18.85■□□□□ 0.61
RAB5C-201ENST00000346213 H0YGN5 161 aa18.84■□□□□ 0.61
RAB5C-201ENST00000346213 CNGA1P29973 690 aa18.84■□□□□ 0.61
RAB5C-201ENST00000346213 FAM133AQ8N9E0 248 aa18.84■□□□□ 0.61
RAB5C-201ENST00000346213 CLEC4DQ8WXI8 215 aa18.84■□□□□ 0.61
RAB5C-201ENST00000346213 TRERF1Q96PN7 1200 aa18.84■□□□□ 0.61
RAB5C-201ENST00000346213 KRT23Q9C075 422 aa18.84■□□□□ 0.61
RAB5C-201ENST00000346213 SLC27A2O14975 620 aa18.83■□□□□ 0.61
RAB5C-201ENST00000346213 ICAM1P05362 532 aa18.83■□□□□ 0.61
RAB5C-201ENST00000346213 NECTIN1Q15223 517 aa18.83■□□□□ 0.61
RAB5C-201ENST00000346213 TMEM63BQ5T3F8 832 aa18.83■□□□□ 0.61
RAB5C-201ENST00000346213 CHST13Q8NET6 341 aa18.83■□□□□ 0.61
RAB5C-201ENST00000346213 EIF5BO60841 1220 aaKnown RBP18.82■□□□□ 0.6
RAB5C-201ENST00000346213 CDC45O75419 566 aa18.82■□□□□ 0.6
RAB5C-201ENST00000346213 COPB2P35606 906 aa18.82■□□□□ 0.6
RAB5C-201ENST00000346213 IQCA1Q86XH1 822 aa18.82■□□□□ 0.6
RAB5C-201ENST00000346213 ACAD9Q9H845 621 aa18.82■□□□□ 0.6
RAB5C-201ENST00000346213 CNNM2Q9H8M5 875 aa18.82■□□□□ 0.6
RAB5C-201ENST00000346213 CCPG1Q9ULG6 757 aa18.82■□□□□ 0.6
RAB5C-201ENST00000346213 DIS3Q9Y2L1 958 aaKnown RBP18.82■□□□□ 0.6
RAB5C-201ENST00000346213 PPP1R11O60927 126 aaPredicted RBP18.82■□□□□ 0.6
RAB5C-201ENST00000346213 MAMDC4Q6UXC1 1216 aa18.82■□□□□ 0.6
RAB5C-201ENST00000346213 SLC30A10Q6XR72 485 aa18.82■□□□□ 0.6
RAB5C-201ENST00000346213 ANKRD35Q8N283 1001 aa18.82■□□□□ 0.6
RAB5C-201ENST00000346213 KAT14Q9H8E8 782 aa18.82■□□□□ 0.6
RAB5C-201ENST00000346213 CYP39A1Q9NYL5 469 aa18.82■□□□□ 0.6
RAB5C-201ENST00000346213 MAD2L2Q9UI95 211 aa18.82■□□□□ 0.6
RAB5C-201ENST00000346213 SEPT4O43236 478 aa18.81■□□□□ 0.6
RAB5C-201ENST00000346213 GJC2Q5T442 439 aaPredicted RBP18.81■□□□□ 0.6
RAB5C-201ENST00000346213 CREB3L3Q68CJ9 461 aa18.81■□□□□ 0.6
RAB5C-201ENST00000346213 RASEFQ8IZ41 740 aa18.81■□□□□ 0.6
RAB5C-201ENST00000346213 ANKLE1Q8NAG6 615 aa18.81■□□□□ 0.6
RAB5C-201ENST00000346213 IGDCC4Q8TDY8 1250 aa18.81■□□□□ 0.6
RAB5C-201ENST00000346213 DDX11Q96FC9 970 aa18.81■□□□□ 0.6
RAB5C-201ENST00000346213 ANO2Q9NQ90 1003 aa18.81■□□□□ 0.6
RAB5C-201ENST00000346213 LAMA3Q16787 3333 aa18.8■□□□□ 0.6
RAB5C-201ENST00000346213 FDX1P10109 184 aa18.8■□□□□ 0.6
RAB5C-201ENST00000346213 LRRC26Q2I0M4 334 aa18.8■□□□□ 0.6
RAB5C-201ENST00000346213 IFIT1BQ5T764 474 aaKnown RBP18.8■□□□□ 0.6
RAB5C-201ENST00000346213 CCDC144CPQ8IYA2 1237 aa18.8■□□□□ 0.6
RAB5C-201ENST00000346213 ADGRF4Q8IZF3 695 aa18.8■□□□□ 0.6
RAB5C-201ENST00000346213 TBC1D5Q92609 795 aa18.8■□□□□ 0.6
RAB5C-201ENST00000346213 UBAC1Q9BSL1 405 aa18.8■□□□□ 0.6
RAB5C-201ENST00000346213 C11orf49Q9H6J7 331 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms