RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 AXIN2Q9Y2T1 843 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.06□□□□□ -0.48
RPL28-201ENST00000344063 SRGAP2O75044 1071 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 PTPREP23469 700 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 PLA2G4AP47712 749 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 SLC7A5Q01650 507 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 CFAP221Q4G0U5 840 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 KSR1Q8IVT5 923 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 TTLL11Q8NHH1 800 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 PANX2Q96RD6 677 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 PPP1R12CQ9BZL4 782 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 ATP8A2Q9NTI2 1148 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 ZBTB1Q9Y2K1 713 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 MAP2P11137 1827 aaKnown RBP12.06□□□□□ -0.48
RPL28-201ENST00000344063 DESP17661 470 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 POLD4Q9HCU8 107 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 PIH1D3Q9NQM4 214 aaKnown RBP12.06□□□□□ -0.48
RPL28-201ENST00000344063 CEMIPQ8WUJ3 1361 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 AGLP35573 1532 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 CLTAP09496 248 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 EEF1GP26641 437 aaKnown RBP12.06□□□□□ -0.48
RPL28-201ENST00000344063 MCAMP43121 646 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 ASIC2Q16515 512 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 STOX1Q6ZVD7 989 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 KCNB2Q92953 911 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 STK38LQ9Y2H1 464 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 EPB41P11171 864 aaKnown RBP12.05□□□□□ -0.48
RPL28-201ENST00000344063 PCK1P35558 622 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 DDX12PQ92771 950 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 CUEDC2Q9H467 287 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 SUGCTQ9HAC7 445 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 GPCPD1Q9NPB8 672 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 SMCO2A6NFE2 343 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 ERVV-1B6SEH8 477 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 GNPATO15228 680 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 OR52Z1P0C646 297 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 PDCLQ13371 301 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 DCAF17Q5H9S7 520 aaPredicted RBP12.05□□□□□ -0.48
RPL28-201ENST00000344063 RRAGAQ7L523 313 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 DYMQ7RTS9 669 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 UIMC1Q96RL1 719 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 FAM169AQ9Y6X4 670 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 CLGNO14967 610 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 TCP1P17987 556 aaKnown RBP12.05□□□□□ -0.48
RPL28-201ENST00000344063 CASP1P29466 404 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 GUCY2DQ02846 1103 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 INF2Q27J81 1249 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 HERC4Q5GLZ8 1057 aaPredicted RBP12.05□□□□□ -0.48
RPL28-201ENST00000344063 LRCH2Q5VUJ6 765 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 ZNF579Q8NAF0 562 aaKnown RBP12.05□□□□□ -0.48
RPL28-201ENST00000344063 LRRN4CLQ8ND94 238 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 UHMK1Q8TAS1 419 aaKnown RBP12.05□□□□□ -0.48
RPL28-201ENST00000344063 LRRC45Q96CN5 670 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 VEZTQ9HBM0 779 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 ODF2LQ9ULJ1 636 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 PCDHB6Q9Y5E3 794 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 CLTCQ00610 1675 aaKnown RBP12.05□□□□□ -0.48
RPL28-201ENST00000344063 KIF20BQ96Q89 1820 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 SEMA3EO15041 775 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 NAP1L3Q99457 506 aaPredicted RBP12.05□□□□□ -0.48
RPL28-201ENST00000344063 MTA3Q9BTC8 594 aa12.05□□□□□ -0.48
RPL28-201ENST00000344063 PREX1Q8TCU6 1659 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 GOLGA8KD6RF30 607 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 PRPF3O43395 683 aaKnown RBP12.04□□□□□ -0.48
RPL28-201ENST00000344063 LACTBP83111 547 aaPredicted RBP12.04□□□□□ -0.48
RPL28-201ENST00000344063 SFMBT2Q5VUG0 894 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 PPP4R3AQ6IN85 833 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 LCORLQ8N3X6 602 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 CNBD1Q8NA66 436 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 N4BP2L2Q92802 583 aaPredicted RBP12.04□□□□□ -0.48
RPL28-201ENST00000344063 MTRF1LQ9UGC7 380 aaKnown RBP12.04□□□□□ -0.48
RPL28-201ENST00000344063 ZNF609O15014 1411 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 UTYO14607 1347 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 LAD1O00515 517 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 UFL1O94874 794 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 CYP27A1Q02318 531 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 RETREG2Q8NC44 543 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 MGARPQ8TDB4 240 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 HYOU1Q9Y4L1 999 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 TAF6LQ9Y6J9 622 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 PRKAB2O43741 272 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 MYL1P05976 194 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 CTNNA1P35221 906 aaKnown RBP12.04□□□□□ -0.48
RPL28-201ENST00000344063 KCNJ6P48051 423 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 KLHL30Q0D2K2 578 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 NYAP1Q6ZVC0 841 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 MAPKAPK5Q8IW41 473 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 CCDC170Q8IYT3 715 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 NT5C3AQ9H0P0 336 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 SLC24A3Q9HC58 644 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
RPL28-201ENST00000344063 NEK8Q86SG6 692 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 TBC1D10CQ8IV04 446 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 RIN2Q8WYP3 895 aaPredicted RBP12.03□□□□□ -0.48
RPL28-201ENST00000344063 C8orf37Q96NL8 207 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 CPSF2Q9P2I0 782 aaKnown RBP12.03□□□□□ -0.48
RPL28-201ENST00000344063 N4BP1O75113 896 aaKnown RBP12.03□□□□□ -0.48
RPL28-201ENST00000344063 GNA14O95837 355 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 VSNL1P62760 191 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 GRIPAP1Q4V328 841 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms