RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 SPATA31A6Q5VVP1 1343 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 MORC3Q14149 939 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 CEP95Q96GE4 821 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 NAPGQ99747 312 aaPredicted RBP7.01□□□□□ -1.29
PRKDC-202ENST00000338368 SLC39A2Q9NP94 309 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.01□□□□□ -1.29
PRKDC-202ENST00000338368 COBLO75128 1261 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 U2AF2P26368 475 aaKnown RBP eCLIP7.01□□□□□ -1.291e-9■■■■□ 21.5
PRKDC-202ENST00000338368 PRKG1Q13976 671 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 PAGE5Q96GU1 130 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 FAM207AQ9NSI2 230 aaPredicted RBP7.01□□□□□ -1.29
PRKDC-202ENST00000338368 FOSP01100 380 aaPredicted RBP7.01□□□□□ -1.29
PRKDC-202ENST00000338368 RHOXF2BP0C7M4 288 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 ST3GAL1Q11201 340 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 RHOXF2Q9BQY4 288 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 NLRC4Q9NPP4 1024 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 BMP3P12645 472 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 GPBP1Q86WP2 473 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 MYCT1Q8N699 235 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 ORC4O43929 436 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 MYCLP12524 364 aaPredicted RBP7.01□□□□□ -1.29
PRKDC-202ENST00000338368 SSR1P43307 286 aaKnown RBP7.01□□□□□ -1.29
PRKDC-202ENST00000338368 UBE2SQ16763 222 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 MYOM1P52179 1685 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 STAG2Q8N3U4 1231 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 SLC4A9Q96Q91 983 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 SLC10A5Q5PT55 438 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 ZNF658Q5TYW1 1059 aaPredicted RBP7.01□□□□□ -1.29
PRKDC-202ENST00000338368 SH3GLB2Q9NR46 395 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 COPB1P53618 953 aaKnown RBP7.01□□□□□ -1.29
PRKDC-202ENST00000338368 SLC9C1Q4G0N8 1177 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 MAEAQ7L5Y9 396 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 NEDD1Q8NHV4 660 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 RIOK1Q9BRS2 568 aaKnown RBP7.01□□□□□ -1.29
PRKDC-202ENST00000338368 BCL2L12Q9HB09 334 aa7.01□□□□□ -1.29
PRKDC-202ENST00000338368 PPLO60437 1756 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 CUEDC2Q9H467 287 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 PICK1Q9NRD5 415 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 HPS5Q9UPZ3 1129 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 C21orf2O43822 256 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 ZBED4O75132 1171 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 DESP17661 470 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 CACNB3P54284 484 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 GPIHBP1Q8IV16 184 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 SPICE1Q8N0Z3 855 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 KDM3AQ9Y4C1 1321 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 KDM4FA0A1W2PPD8 638 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 BACH1O14867 736 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 TBC1D16Q8TBP0 767 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 CRAMP1Q96RY5 1269 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 AGXT2Q9BYV1 514 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 CCDC144BQ3MJ40 725 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 RDH13Q8NBN7 331 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 JAKMIP2Q96AA8 810 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 DESI2Q9BSY9 194 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 PPP2R3AQ06190 1150 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 ERICH4A6NGS2 130 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 RBL2Q08999 1139 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 ARID5BQ14865 1188 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 PLA2G4DQ86XP0 818 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 PANK4Q9NVE7 773 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 FRMD4BQ9Y2L6 1034 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 COL5A2P05997 1499 aaPredicted RBP7□□□□□ -1.29
PRKDC-202ENST00000338368 GCFC2P16383 781 aaKnown RBP7□□□□□ -1.29
PRKDC-202ENST00000338368 SRBD1Q8N5C6 995 aaKnown RBP7□□□□□ -1.29
PRKDC-202ENST00000338368 CNOT6LQ96LI5 555 aaKnown RBP7□□□□□ -1.29
PRKDC-202ENST00000338368 LARSQ9P2J5 1176 aaKnown RBP7□□□□□ -1.29
PRKDC-202ENST00000338368 MRPL11Q9Y3B7 192 aaKnown RBP7□□□□□ -1.29
PRKDC-202ENST00000338368 CRKP46108 304 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 KIAA0753Q2KHM9 967 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 VSTM4Q8IW00 320 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 FBXO2Q9UK22 296 aaPredicted RBP7□□□□□ -1.29
PRKDC-202ENST00000338368 KIAA1024Q9UPX6 916 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 CALUO43852 315 aaPredicted RBP7□□□□□ -1.29
PRKDC-202ENST00000338368 SETQ01105 290 aaPredicted RBP7□□□□□ -1.29
PRKDC-202ENST00000338368 MCM6Q14566 821 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 VWA3BQ502W6 1294 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 CCDC94Q9BW85 323 aaPredicted RBP7□□□□□ -1.29
PRKDC-202ENST00000338368 BCL9O00512 1426 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 TUBBP07437 444 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 TNFAIP1Q13829 316 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 LMBR1Q8WVP7 490 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 P2RX5Q93086 422 aa7□□□□□ -1.29
PRKDC-202ENST00000338368 EXOC3O60645 756 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 PHACTR2O75167 634 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 CCNE1P24864 410 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 KLHL30Q0D2K2 578 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 TXNRD3Q86VQ6 643 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 TPH2Q8IWU9 490 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 GCOM1H8Y6P7 765 aaPredicted RBP6.99□□□□□ -1.29
PRKDC-202ENST00000338368 POLR2MP0CAP2 368 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 MAGEF1Q9HAY2 307 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 UBXN2AP68543 259 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 TROAPQ12815 778 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 TUBB2AQ13885 445 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 TUBB2BQ9BVA1 445 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 PHF20Q9BVI0 1012 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 CCDC169A6NNP5 214 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 GCNT3O95395 438 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 CUL4BQ13620 913 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms