RNA–Protein interactions for RNA: ENST00000336119.7

NLRP3-201, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 4,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-201ENST00000336119 ARMCX5Q6P1M9 558 aa10.36□□□□□ -0.75
NLRP3-201ENST00000336119 CCDC84Q86UT8 332 aaPredicted RBP10.36□□□□□ -0.75
NLRP3-201ENST00000336119 GPR101Q96P66 508 aaPredicted RBP10.36□□□□□ -0.75
NLRP3-201ENST00000336119 SPAG5Q96R06 1193 aa10.36□□□□□ -0.75
NLRP3-201ENST00000336119 PANX2Q96RD6 677 aa10.36□□□□□ -0.75
NLRP3-201ENST00000336119 EEF1GP26641 437 aaKnown RBP10.35□□□□□ -0.75
NLRP3-201ENST00000336119 CASP14P31944 242 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 GTF2F1P35269 517 aaKnown RBP eCLIP10.35□□□□□ -0.75
NLRP3-201ENST00000336119 SEC23AQ15436 765 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 GPATCH4Q5T3I0 446 aaKnown RBP10.35□□□□□ -0.75
NLRP3-201ENST00000336119 HAUS3Q68CZ6 603 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 FLAD1Q8NFF5 587 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 NT5C3AQ9H0P0 336 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 SERPINB13Q9UIV8 391 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 MYO6Q9UM54 1294 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 EFCAB8A8MWE9 144 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 TMEM232C9JQI7 657 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 RBL2Q08999 1139 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 PIGSQ96S52 555 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 TSGA10Q9BZW7 698 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 PSTPIP2Q9H939 334 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 DISC1Q9NRI5 854 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 FAM217BQ9NTX9 383 aaPredicted RBP10.35□□□□□ -0.75
NLRP3-201ENST00000336119 H0YIN7 160 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 SCNN1DP51172 638 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 DOK7Q18PE1 504 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 COA1Q9GZY4 146 aa10.35□□□□□ -0.75
NLRP3-201ENST00000336119 LRP6O75581 1613 aa10.34□□□□□ -0.75
NLRP3-201ENST00000336119 FAM205CA6NFA0 338 aa10.34□□□□□ -0.75
NLRP3-201ENST00000336119 USP27XA6NNY8 438 aa10.34□□□□□ -0.75
NLRP3-201ENST00000336119 UBE2Q2LH0YL09 131 aa10.34□□□□□ -0.75
NLRP3-201ENST00000336119 TTLL1O95922 423 aa10.34□□□□□ -0.75
NLRP3-201ENST00000336119 TCP10Q12799 353 aa10.34□□□□□ -0.75
NLRP3-201ENST00000336119 EZH2Q15910 746 aaKnown RBP10.34□□□□□ -0.75
NLRP3-201ENST00000336119 SLC44A5Q8NCS7 719 aa10.34□□□□□ -0.75
NLRP3-201ENST00000336119 TBCKQ8TEA7 893 aa10.34□□□□□ -0.75
NLRP3-201ENST00000336119 NBPF3Q9H094 633 aa10.34□□□□□ -0.75
NLRP3-201ENST00000336119 R3HDM1Q15032 1099 aaKnown RBP10.34□□□□□ -0.75
NLRP3-201ENST00000336119 MCTP2Q6DN12 878 aa10.34□□□□□ -0.75
NLRP3-201ENST00000336119 GPR161Q8N6U8 529 aaKnown RBP10.34□□□□□ -0.75
NLRP3-201ENST00000336119 NEDD1Q8NHV4 660 aa10.34□□□□□ -0.75
NLRP3-201ENST00000336119 DPF2Q92785 391 aa10.34□□□□□ -0.75
NLRP3-201ENST00000336119 RGS17Q9UGC6 210 aaPredicted RBP10.34□□□□□ -0.75
NLRP3-201ENST00000336119 PCDHA12Q9UN75 941 aa10.34□□□□□ -0.75
NLRP3-201ENST00000336119 STK24Q9Y6E0 443 aa10.34□□□□□ -0.75
NLRP3-201ENST00000336119 SCN11AQ9UI33 1791 aa10.34□□□□□ -0.75
NLRP3-201ENST00000336119 PARP4Q9UKK3 1724 aaKnown RBP10.34□□□□□ -0.75
NLRP3-201ENST00000336119 CASP1P29466 404 aa10.34□□□□□ -0.75
NLRP3-201ENST00000336119 RBM26Q5T8P6 1007 aaKnown RBP10.34□□□□□ -0.75
NLRP3-201ENST00000336119 SEPT11Q9NVA2 429 aaKnown RBP10.34□□□□□ -0.75
NLRP3-201ENST00000336119 COBLO75128 1261 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 TOB1P50616 345 aaPredicted RBP10.33□□□□□ -0.76
NLRP3-201ENST00000336119 CDR1P51861 262 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 CUL4BQ13620 913 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 MCM6Q14566 821 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 HERC4Q5GLZ8 1057 aaPredicted RBP10.33□□□□□ -0.76
NLRP3-201ENST00000336119 USP49Q70CQ1 688 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 JAKMIP2Q96AA8 810 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 ZMYND15Q9H091 742 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 BARHL2Q9NY43 387 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 EPN1Q9Y6I3 576 aaPredicted RBP10.33□□□□□ -0.76
NLRP3-201ENST00000336119 KDM3AQ9Y4C1 1321 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 BCL9LQ86UU0 1499 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 ERICH4A6NGS2 130 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 FAM193AP78312 1265 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 GPSM2P81274 684 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 CETN1Q12798 172 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 CNTNAP5Q8WYK1 1306 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 CETN3O15182 167 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 RHOXF2BP0C7M4 288 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 RPL13P26373 211 aaKnown RBP10.33□□□□□ -0.76
NLRP3-201ENST00000336119 KRT31Q15323 416 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 IFI16Q16666 785 aaKnown RBP10.33□□□□□ -0.76
NLRP3-201ENST00000336119 ADGRA1Q86SQ6 560 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 P2RX5Q93086 422 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 RHOXF2Q9BQY4 288 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 TUBGCP2Q9BSJ2 902 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 HAUS4Q9H6D7 363 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 STK17AQ9UEE5 414 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 ATRNO75882 1429 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 GRIN1Q05586 938 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 NCBP1Q09161 790 aaKnown RBP10.33□□□□□ -0.76
NLRP3-201ENST00000336119 CERKLQ49MI3 558 aaPredicted RBP10.33□□□□□ -0.76
NLRP3-201ENST00000336119 STAG2Q8N3U4 1231 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 DRC1Q96MC2 740 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 ARHGEF10LQ9HCE6 1279 aa10.33□□□□□ -0.76
NLRP3-201ENST00000336119 COL16A1Q07092 1604 aaPredicted RBP10.32□□□□□ -0.76
NLRP3-201ENST00000336119 ACTN4O43707 911 aaKnown RBP10.32□□□□□ -0.76
NLRP3-201ENST00000336119 PLCG1P19174 1290 aa10.32□□□□□ -0.76
NLRP3-201ENST00000336119 CCNE1P24864 410 aa10.32□□□□□ -0.76
NLRP3-201ENST00000336119 NOP2P46087 812 aaKnown RBP10.32□□□□□ -0.76
NLRP3-201ENST00000336119 GABPB1Q06547 395 aaPredicted RBP10.32□□□□□ -0.76
NLRP3-201ENST00000336119 SEMA3FQ13275 785 aa10.32□□□□□ -0.76
NLRP3-201ENST00000336119 KMT5BQ4FZB7 885 aa10.32□□□□□ -0.76
NLRP3-201ENST00000336119 SYCP3Q8IZU3 236 aa10.32□□□□□ -0.76
NLRP3-201ENST00000336119 THAP9Q9H5L6 903 aa10.32□□□□□ -0.76
NLRP3-201ENST00000336119 RNF216Q9NWF9 866 aaPredicted RBP10.32□□□□□ -0.76
NLRP3-201ENST00000336119 DDX25Q9UHL0 483 aaKnown RBP10.32□□□□□ -0.76
NLRP3-201ENST00000336119 USP54Q70EL1 1684 aa10.32□□□□□ -0.76
NLRP3-201ENST00000336119 PDS5AQ29RF7 1337 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms