RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 EIF6P56537 245 aaKnown RBP15.62■□□□□ 0.09
SF1-202ENST00000334944 MMS22LQ6ZRQ5 1243 aa15.62■□□□□ 0.09
SF1-202ENST00000334944 FNBP4Q8N3X1 1017 aaPredicted RBP15.62■□□□□ 0.09
SF1-202ENST00000334944 RASSF8Q8NHQ8 419 aa15.62■□□□□ 0.09
SF1-202ENST00000334944 WDR66Q8TBY9 1149 aa15.62■□□□□ 0.09
SF1-202ENST00000334944 CCDC12Q8WUD4 166 aaPredicted RBP15.62■□□□□ 0.09
SF1-202ENST00000334944 ATRIPQ8WXE1 791 aa15.62■□□□□ 0.09
SF1-202ENST00000334944 CTNND2Q9UQB3 1225 aa15.62■□□□□ 0.09
SF1-202ENST00000334944 XDHP47989 1333 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 C6orf229H3BNL8 230 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 ZNF18P17022 549 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 CCT6AP40227 531 aaKnown RBP15.61■□□□□ 0.09
SF1-202ENST00000334944 MAP3K9P80192 1104 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 ATP2C1P98194 919 aaPredicted RBP15.61■□□□□ 0.09
SF1-202ENST00000334944 MTF1Q14872 753 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 SBK1Q52WX2 424 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 NT5DC1Q5TFE4 455 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 USP17L2Q6R6M4 530 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 TOGARAM2Q6ZUX3 1019 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 ANKRD20A12PQ8NF67 263 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 GDAP1L1Q96MZ0 367 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 PICALMQ13492 652 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 ZNF804AQ7Z570 1209 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 BLIDQ8IZY5 108 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 GOLGA1Q92805 767 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 TMEM47Q9BQJ4 181 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 MXD3Q9BW11 206 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 CD209Q9NNX6 404 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 MRFAP1Q9Y605 127 aa15.61■□□□□ 0.09
SF1-202ENST00000334944 MAP2K7O14733 419 aa15.6■□□□□ 0.09
SF1-202ENST00000334944 KIF5BP33176 963 aa15.6■□□□□ 0.09
SF1-202ENST00000334944 MFSD14BQ5SR56 506 aa15.6■□□□□ 0.09
SF1-202ENST00000334944 ENOX1Q8TC92 643 aaKnown RBP15.6■□□□□ 0.09
SF1-202ENST00000334944 TMEM60Q9H2L4 133 aa15.6■□□□□ 0.09
SF1-202ENST00000334944 FAM204AQ9H8W3 233 aa15.6■□□□□ 0.09
SF1-202ENST00000334944 MAD2L2Q9UI95 211 aa15.6■□□□□ 0.09
SF1-202ENST00000334944 PCP11498 1178 aaKnown RBP15.6■□□□□ 0.09
SF1-202ENST00000334944 TXLNAP40222 546 aa15.6■□□□□ 0.09
SF1-202ENST00000334944 TADA2BQ86TJ2 420 aa15.6■□□□□ 0.09
SF1-202ENST00000334944 TEX11Q8IYF3 940 aa15.6■□□□□ 0.09
SF1-202ENST00000334944 FERMT2Q96AC1 680 aa15.6■□□□□ 0.09
SF1-202ENST00000334944 SYNRGQ9UMZ2 1314 aa15.6■□□□□ 0.09
SF1-202ENST00000334944 ECM2O94769 699 aaPredicted RBP15.59■□□□□ 0.09
SF1-202ENST00000334944 BAG3O95817 575 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 SERPINB2P05120 415 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 RASA1P20936 1047 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 BEND6Q5SZJ8 279 aaPredicted RBP15.59■□□□□ 0.09
SF1-202ENST00000334944 JAKMIP3Q5VZ66 844 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 RABGGTAQ92696 567 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 UBA5Q9GZZ9 404 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 LZTFL1Q9NQ48 299 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 POLLQ9UGP5 575 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 RRAGBQ5VZM2 374 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 KANK3Q6NY19 840 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 SEPT12Q8IYM1 358 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 SPATA20Q8TB22 786 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 RIN2Q8WYP3 895 aaPredicted RBP15.59■□□□□ 0.09
SF1-202ENST00000334944 GJD4Q96KN9 370 aaPredicted RBP15.59■□□□□ 0.09
SF1-202ENST00000334944 RTFDC1Q9BY42 306 aaPredicted RBP15.59■□□□□ 0.09
SF1-202ENST00000334944 GDAQ9Y2T3 454 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 CCDC194A0A1B0GVG4 234 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 SPECC1LQ69YQ0 1117 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 TMEM139Q8IV31 216 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 TC2NQ8N9U0 490 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 BAG1Q99933 345 aaPredicted RBP15.59■□□□□ 0.09
SF1-202ENST00000334944 ANKZF1Q9H8Y5 726 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 LEMD3Q9Y2U8 911 aa15.59■□□□□ 0.09
SF1-202ENST00000334944 CCDC151A5D8V7 595 aa15.58■□□□□ 0.08
SF1-202ENST00000334944 GYS1P13807 737 aa15.58■□□□□ 0.08
SF1-202ENST00000334944 UIMC1Q96RL1 719 aa15.58■□□□□ 0.08
SF1-202ENST00000334944 EHD4Q9H223 541 aa15.58■□□□□ 0.08
SF1-202ENST00000334944 DACH1Q9UI36 760 aa15.58■□□□□ 0.08
SF1-202ENST00000334944 KLRF2D3W0D1 207 aa15.58■□□□□ 0.08
SF1-202ENST00000334944 CHMP4BP1P59074 171 aa15.58■□□□□ 0.08
SF1-202ENST00000334944 AMOTL1Q8IY63 956 aa15.58■□□□□ 0.08
SF1-202ENST00000334944 EYA3Q99504 573 aa15.58■□□□□ 0.08
SF1-202ENST00000334944 PPP1R3GB7ZBB8 358 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 CDK8P49336 464 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 GTF2IP78347 998 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 HSP90B2PQ58FF3 399 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 HDXQ7Z353 690 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 SH3RF1Q7Z6J0 888 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 GGA1Q9UJY5 639 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 FRMPD2Q68DX3 1309 aaPredicted RBP15.57■□□□□ 0.08
SF1-202ENST00000334944 UTRNP46939 3433 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 SOWAHDA6NJG2 315 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 DGKHQ86XP1 1220 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 DONSONQ9NYP3 566 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 PCDHA4Q9UN74 947 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 TRIM37O94972 964 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 SCP2P22307 547 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 VSNL1P62760 191 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 ZNF622Q969S3 477 aaKnown RBP eCLIP15.57■□□□□ 0.087e-8■■□□□ 12
SF1-202ENST00000334944 VPS16Q9H269 839 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 PCDHA6Q9UN73 950 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 PCDHA8Q9Y5H6 950 aa15.57■□□□□ 0.08
SF1-202ENST00000334944 PDS5AQ29RF7 1337 aaKnown RBP15.56■□□□□ 0.08
SF1-202ENST00000334944 TRIM49BA6NDI0 452 aa15.56■□□□□ 0.08
SF1-202ENST00000334944 GRM4Q14833 912 aa15.56■□□□□ 0.08
SF1-202ENST00000334944 PDXDC2PQ6P474 469 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms