RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 MORN1Q5T089 497 aa18.52■□□□□ 0.55
CCDC28A-201ENST00000332797 SYNE3Q6ZMZ3 975 aa18.52■□□□□ 0.55
CCDC28A-201ENST00000332797 MICU3Q86XE3 530 aa18.52■□□□□ 0.55
CCDC28A-201ENST00000332797 CCDC144CPQ8IYA2 1237 aa18.52■□□□□ 0.55
CCDC28A-201ENST00000332797 ADGRF4Q8IZF3 695 aa18.52■□□□□ 0.55
CCDC28A-201ENST00000332797 UPF3BQ9BZI7 483 aaKnown RBP18.52■□□□□ 0.55
CCDC28A-201ENST00000332797 TM6SF1Q9BZW5 370 aa18.52■□□□□ 0.55
CCDC28A-201ENST00000332797 ZSWIM6Q9HCJ5 1215 aa18.52■□□□□ 0.55
CCDC28A-201ENST00000332797 VAT1LQ9HCJ6 419 aa18.52■□□□□ 0.55
CCDC28A-201ENST00000332797 HOMER2Q9NSB8 354 aa18.52■□□□□ 0.55
CCDC28A-201ENST00000332797 CCPG1Q9ULG6 757 aa18.52■□□□□ 0.55
CCDC28A-201ENST00000332797 DOCK3Q8IZD9 2030 aa18.51■□□□□ 0.55
CCDC28A-201ENST00000332797 ICAM1P05362 532 aa18.51■□□□□ 0.55
CCDC28A-201ENST00000332797 CALM1P0DP23 149 aa18.51■□□□□ 0.55
CCDC28A-201ENST00000332797 CALM2P0DP24 149 aa18.51■□□□□ 0.55
CCDC28A-201ENST00000332797 CALM3P0DP25 149 aa18.51■□□□□ 0.55
CCDC28A-201ENST00000332797 ALAS1P13196 640 aa18.51■□□□□ 0.55
CCDC28A-201ENST00000332797 TAL1P17542 331 aaPredicted RBP18.51■□□□□ 0.55
CCDC28A-201ENST00000332797 CYP2B6P20813 491 aa18.51■□□□□ 0.55
CCDC28A-201ENST00000332797 KIF5BP33176 963 aa18.51■□□□□ 0.55
CCDC28A-201ENST00000332797 GRB14Q14449 540 aa18.51■□□□□ 0.55
CCDC28A-201ENST00000332797 SLC9C1Q4G0N8 1177 aa18.51■□□□□ 0.55
CCDC28A-201ENST00000332797 APOA5Q6Q788 366 aa18.51■□□□□ 0.55
CCDC28A-201ENST00000332797 BRF1Q92994 677 aa18.51■□□□□ 0.55
CCDC28A-201ENST00000332797 MAP3K14Q99558 947 aa18.51■□□□□ 0.55
CCDC28A-201ENST00000332797 BRPF3Q9ULD4 1205 aa18.51■□□□□ 0.55
CCDC28A-201ENST00000332797 NAP1L2Q9ULW6 460 aaPredicted RBP18.51■□□□□ 0.55
CCDC28A-201ENST00000332797 KLF18A0A0U1RQI7 1052 aa18.5■□□□□ 0.55
CCDC28A-201ENST00000332797 STRNO43815 780 aa18.5■□□□□ 0.55
CCDC28A-201ENST00000332797 ADCY3O60266 1144 aa18.5■□□□□ 0.55
CCDC28A-201ENST00000332797 FCER1AP12319 257 aa18.5■□□□□ 0.55
CCDC28A-201ENST00000332797 ADORA2AP29274 412 aa18.5■□□□□ 0.55
CCDC28A-201ENST00000332797 RGS2P41220 211 aa18.5■□□□□ 0.55
CCDC28A-201ENST00000332797 MAP2K5Q13163 448 aa18.5■□□□□ 0.55
CCDC28A-201ENST00000332797 IRF5Q13568 498 aa18.5■□□□□ 0.55
CCDC28A-201ENST00000332797 CDC37Q16543 378 aaPredicted RBP18.5■□□□□ 0.55
CCDC28A-201ENST00000332797 ABHD8Q96I13 439 aa18.5■□□□□ 0.55
CCDC28A-201ENST00000332797 MMP19Q99542 508 aa18.5■□□□□ 0.55
CCDC28A-201ENST00000332797 JMJD4Q9H9V9 463 aa18.5■□□□□ 0.55
CCDC28A-201ENST00000332797 RNF146Q9NTX7 359 aa18.5■□□□□ 0.55
CCDC28A-201ENST00000332797 ZNF236Q9UL36 1845 aa18.5■□□□□ 0.55
CCDC28A-201ENST00000332797 ELNP15502 786 aa18.49■□□□□ 0.55
CCDC28A-201ENST00000332797 APOBRQ0VD83 1088 aa18.49■□□□□ 0.55
CCDC28A-201ENST00000332797 KCTD2Q14681 263 aa18.49■□□□□ 0.55
CCDC28A-201ENST00000332797 CHST13Q8NET6 341 aa18.49■□□□□ 0.55
CCDC28A-201ENST00000332797 SH3TC2Q8TF17 1288 aa18.49■□□□□ 0.55
CCDC28A-201ENST00000332797 USP6NLQ92738 828 aa18.49■□□□□ 0.55
CCDC28A-201ENST00000332797 TRERF1Q96PN7 1200 aa18.49■□□□□ 0.55
CCDC28A-201ENST00000332797 APBA2Q99767 749 aa18.49■□□□□ 0.55
CCDC28A-201ENST00000332797 ZBTB43O43298 467 aa18.48■□□□□ 0.55
CCDC28A-201ENST00000332797 GRK4P32298 578 aa18.48■□□□□ 0.55
CCDC28A-201ENST00000332797 SLC35G1Q2M3R5 365 aa18.48■□□□□ 0.55
CCDC28A-201ENST00000332797 TKFCQ3LXA3 575 aa18.48■□□□□ 0.55
CCDC28A-201ENST00000332797 NBPF11Q86T75 865 aa18.48■□□□□ 0.55
CCDC28A-201ENST00000332797 DPP9Q86TI2 863 aa18.48■□□□□ 0.55
CCDC28A-201ENST00000332797 ABRAQ8N0Z2 381 aa18.48■□□□□ 0.55
CCDC28A-201ENST00000332797 SLAIN1Q8ND83 568 aa18.48■□□□□ 0.55
CCDC28A-201ENST00000332797 ACAD9Q9H845 621 aa18.48■□□□□ 0.55
CCDC28A-201ENST00000332797 FBXO40Q9UH90 709 aa18.48■□□□□ 0.55
CCDC28A-201ENST00000332797 GOLGA8AA7E2F4 631 aa18.47■□□□□ 0.55
CCDC28A-201ENST00000332797 GOLGA8BA8MQT2 603 aa18.47■□□□□ 0.55
CCDC28A-201ENST00000332797 PLEKHA8P1O95397 391 aa18.47■□□□□ 0.55
CCDC28A-201ENST00000332797 QRICH1Q2TAL8 776 aa18.47■□□□□ 0.55
CCDC28A-201ENST00000332797 USH1GQ495M9 461 aa18.47■□□□□ 0.55
CCDC28A-201ENST00000332797 HOMER1Q86YM7 354 aa18.47■□□□□ 0.55
CCDC28A-201ENST00000332797 FANCBQ8NB91 859 aa18.47■□□□□ 0.55
CCDC28A-201ENST00000332797 AGXT2Q9BYV1 514 aa18.47■□□□□ 0.55
CCDC28A-201ENST00000332797 PDRG1Q9NUG6 133 aa18.47■□□□□ 0.55
CCDC28A-201ENST00000332797 BIN2Q9UBW5 565 aaPredicted RBP18.47■□□□□ 0.55
CCDC28A-201ENST00000332797 PNMA2Q9UL42 364 aa18.47■□□□□ 0.55
CCDC28A-201ENST00000332797 PGK2P07205 417 aa18.46■□□□□ 0.55
CCDC28A-201ENST00000332797 XRCC5P13010 732 aaKnown RBP18.46■□□□□ 0.55
CCDC28A-201ENST00000332797 GNAQP50148 359 aa18.46■□□□□ 0.55
CCDC28A-201ENST00000332797 MUM1L1Q5H9M0 696 aa18.46■□□□□ 0.55
CCDC28A-201ENST00000332797 ANKRD35Q8N283 1001 aa18.46■□□□□ 0.55
CCDC28A-201ENST00000332797 FBXL16Q8N461 479 aa18.46■□□□□ 0.55
CCDC28A-201ENST00000332797 PXYLP1Q8TE99 480 aa18.46■□□□□ 0.55
CCDC28A-201ENST00000332797 RIOX1Q9H6W3 641 aa18.46■□□□□ 0.55
CCDC28A-201ENST00000332797 CYTH3O43739 400 aa18.46■□□□□ 0.54
CCDC28A-201ENST00000332797 COBLO75128 1261 aa18.46■□□□□ 0.54
CCDC28A-201ENST00000332797 TOB2Q14106 344 aaPredicted RBP18.46■□□□□ 0.54
CCDC28A-201ENST00000332797 CCL14Q16627 93 aa18.46■□□□□ 0.54
CCDC28A-201ENST00000332797 RTN1Q16799 776 aa18.46■□□□□ 0.54
CCDC28A-201ENST00000332797 CMTR1Q8N1G2 835 aaKnown RBP18.46■□□□□ 0.54
CCDC28A-201ENST00000332797 NPLOC4Q8TAT6 608 aa18.46■□□□□ 0.54
CCDC28A-201ENST00000332797 PIBF1Q8WXW3 757 aa18.46■□□□□ 0.54
CCDC28A-201ENST00000332797 ARMC5Q96C12 935 aa18.46■□□□□ 0.54
CCDC28A-201ENST00000332797 IL17RAQ96F46 866 aa18.46■□□□□ 0.54
CCDC28A-201ENST00000332797 DDX11Q96FC9 970 aa18.46■□□□□ 0.54
CCDC28A-201ENST00000332797 PIGSQ96S52 555 aa18.46■□□□□ 0.54
CCDC28A-201ENST00000332797 LZTS2Q9BRK4 669 aa18.46■□□□□ 0.54
CCDC28A-201ENST00000332797 C22orf23Q9BZE7 217 aa18.46■□□□□ 0.54
CCDC28A-201ENST00000332797 UPF2Q9HAU5 1272 aaKnown RBP18.46■□□□□ 0.54
CCDC28A-201ENST00000332797 SLC5A4Q9NY91 659 aa18.46■□□□□ 0.54
CCDC28A-201ENST00000332797 ZBTB5O15062 677 aa18.45■□□□□ 0.54
CCDC28A-201ENST00000332797 MYCP01106 439 aaPredicted RBP18.45■□□□□ 0.54
CCDC28A-201ENST00000332797 HOXC6P09630 235 aa18.45■□□□□ 0.54
CCDC28A-201ENST00000332797 METAP2P50579 478 aaKnown RBP eCLIP18.45■□□□□ 0.54
CCDC28A-201ENST00000332797 RCAN1P53805 252 aa18.45■□□□□ 0.54
CCDC28A-201ENST00000332797 TMTC3Q6ZXV5 915 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms