RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 A0A0G2JMZ2 1700 aa11.79□□□□□ -0.52
VIPAS39-201ENST00000327028 KIF28PB7ZC32 967 aa11.79□□□□□ -0.52
VIPAS39-201ENST00000327028 KRT2P35908 639 aa11.79□□□□□ -0.52
VIPAS39-201ENST00000327028 SNAPC2Q13487 334 aa11.79□□□□□ -0.52
VIPAS39-201ENST00000327028 NPY5RQ15761 445 aa11.79□□□□□ -0.52
VIPAS39-201ENST00000327028 CATSPERGQ6ZRH7 1159 aa11.79□□□□□ -0.52
VIPAS39-201ENST00000327028 BRAPQ7Z569 592 aa11.79□□□□□ -0.52
VIPAS39-201ENST00000327028 DAGLBQ8NCG7 672 aa11.79□□□□□ -0.52
VIPAS39-201ENST00000327028 FOXP1Q9H334 677 aaPredicted RBP11.79□□□□□ -0.52
VIPAS39-201ENST00000327028 MYPNQ86TC9 1320 aa11.79□□□□□ -0.52
VIPAS39-201ENST00000327028 TOMM70O94826 608 aa11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 FDX1P10109 184 aa11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 U2AF2P26368 475 aaKnown RBP eCLIP11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 HUNKP57058 714 aa11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 SNAP25P60880 206 aa11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 TRAF1Q13077 416 aa11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 MOGSQ13724 837 aa11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 GADL1Q6ZQY3 521 aa11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 FBXO11Q86XK2 927 aa11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 AMNQ9BXJ7 453 aa11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 ZMYND12Q9H0C1 365 aa11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 ZBTB48P10074 688 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 YY1P25490 414 aa11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 GNL2Q13823 731 aaKnown RBP11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 TREML2Q5T2D2 321 aa11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 FASTKD5Q7L8L6 764 aaKnown RBP11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 COA7Q96BR5 231 aa11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 GBP4Q96PP9 640 aa11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 PCDHA4Q9UN74 947 aa11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 AGTPBP1Q9UPW5 1226 aa11.78□□□□□ -0.52
VIPAS39-201ENST00000327028 DSG3P32926 999 aa11.77□□□□□ -0.52
VIPAS39-201ENST00000327028 SLC38A10Q9HBR0 1119 aa11.77□□□□□ -0.52
VIPAS39-201ENST00000327028 C6orf50Q9HD87 102 aa11.77□□□□□ -0.52
VIPAS39-201ENST00000327028 PCDHA1Q9Y5I3 950 aa11.77□□□□□ -0.52
VIPAS39-201ENST00000327028 COL11A1P12107 1806 aaPredicted RBP11.77□□□□□ -0.53
VIPAS39-201ENST00000327028 BTBD18B2RXH4 712 aa11.77□□□□□ -0.53
VIPAS39-201ENST00000327028 BAG4O95429 457 aaKnown RBP11.77□□□□□ -0.53
VIPAS39-201ENST00000327028 HOXA7P31268 230 aaPredicted RBP11.77□□□□□ -0.53
VIPAS39-201ENST00000327028 FSTL1Q12841 308 aa11.77□□□□□ -0.53
VIPAS39-201ENST00000327028 COG2Q14746 738 aa11.77□□□□□ -0.53
VIPAS39-201ENST00000327028 SPRYD7Q5W111 196 aa11.77□□□□□ -0.53
VIPAS39-201ENST00000327028 SAMD1Q6SPF0 538 aaPredicted RBP11.77□□□□□ -0.53
VIPAS39-201ENST00000327028 NOSTRINQ8IVI9 506 aa11.77□□□□□ -0.53
VIPAS39-201ENST00000327028 BLIDQ8IZY5 108 aa11.77□□□□□ -0.53
VIPAS39-201ENST00000327028 OXER1Q8TDS5 423 aa11.77□□□□□ -0.53
VIPAS39-201ENST00000327028 TNFRSF25Q93038 417 aa11.77□□□□□ -0.53
VIPAS39-201ENST00000327028 PNMA2Q9UL42 364 aa11.77□□□□□ -0.53
VIPAS39-201ENST00000327028 RBBP6Q7Z6E9 1792 aaKnown RBP11.77□□□□□ -0.53
VIPAS39-201ENST00000327028 SMCO2A6NFE2 343 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 ZBED4O75132 1171 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 ICAM1P05362 532 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 GNA11P29992 359 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 ADCY7P51828 1080 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 GTF2A2P52657 109 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 CCDC174Q6PII3 467 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 SAPCD2Q86UD0 394 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 ZNF784Q8NCA9 323 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 BICD2Q8TD16 824 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 ATG4CQ96DT6 458 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 ADAMTS5Q9UNA0 930 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 TLL2Q9Y6L7 1015 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 ZNF536O15090 1300 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 VWA5AO00534 786 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 CETPP11597 493 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 NR5A1Q13285 461 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 PABPC4Q13310 644 aaKnown RBP eCLIP11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 RASAL3Q86YV0 1011 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 GLT8D2Q9H1C3 349 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 RIC8AQ9NPQ8 531 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 HOXC10Q9NYD6 342 aa11.76□□□□□ -0.53
VIPAS39-201ENST00000327028 ABCB11O95342 1321 aa11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 SPDYE16A6NNV3 312 aaPredicted RBP11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 M0R2N6 131 aa11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 USH1GQ495M9 461 aa11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 MYSM1Q5VVJ2 828 aa11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 GPAT2Q6NUI2 795 aa11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 FAM173BQ6P4H8 233 aa11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 REPS2Q8NFH8 660 aa11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 MS4A4AQ96JQ5 239 aa11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 OAZ1P54368 228 aa11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 IRX3P78415 501 aaPredicted RBP11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 DNM1Q05193 864 aaKnown RBP11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 FOXD4L6Q3SYB3 417 aaPredicted RBP11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 ATL3Q6DD88 541 aa11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 FOXD4L3Q6VB84 417 aaPredicted RBP11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 TEX2Q8IWB9 1127 aa11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 CUL5Q93034 780 aa11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 CHAMP1Q96JM3 812 aa11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 CTDP1Q9Y5B0 961 aaPredicted RBP11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 TCHHQ07283 1943 aa11.75□□□□□ -0.53
VIPAS39-201ENST00000327028 TMEM88BA6NKF7 163 aa11.74□□□□□ -0.53
VIPAS39-201ENST00000327028 ADAMTS3O15072 1205 aa11.74□□□□□ -0.53
VIPAS39-201ENST00000327028 RGMBQ6NW40 437 aa11.74□□□□□ -0.53
VIPAS39-201ENST00000327028 LBX2Q6XYB7 198 aa11.74□□□□□ -0.53
VIPAS39-201ENST00000327028 ZNF396Q96N95 335 aaPredicted RBP11.74□□□□□ -0.53
VIPAS39-201ENST00000327028 ASCC2Q9H1I8 757 aaPredicted RBP11.74□□□□□ -0.53
VIPAS39-201ENST00000327028 CCPG1Q9ULG6 757 aa11.74□□□□□ -0.53
VIPAS39-201ENST00000327028 PCDHA6Q9UN73 950 aa11.74□□□□□ -0.53
VIPAS39-201ENST00000327028 SLC45A1Q9Y2W3 748 aa11.74□□□□□ -0.53
VIPAS39-201ENST00000327028 PCDHA8Q9Y5H6 950 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms