RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 OR8K1Q8NGG5 319 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 CICQ96RK0 1608 aaPredicted RBP22.29■■□□□ 1.16
CRLF3-201ENST00000324238 VAT1LQ9HCJ6 419 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 STX8Q9UNK0 236 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 MYH13Q9UKX3 1938 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 ZNF804BA4D1E1 1349 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 CCDC194A0A1B0GVG4 234 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 PLEKP08567 350 aaPredicted RBP22.29■■□□□ 1.16
CRLF3-201ENST00000324238 AMPD2Q01433 879 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 CCDC178Q5BJE1 867 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 KIAA1328Q86T90 577 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 DISC1Q9NRI5 854 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 IL17RBQ9NRM6 502 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.29■■□□□ 1.16
CRLF3-201ENST00000324238 SEMA3EO15041 775 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 ERLIN1O75477 346 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 DDAH1O94760 285 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 CALM1P0DP23 149 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 CALM2P0DP24 149 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 CALM3P0DP25 149 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 FCER1AP12319 257 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 DTHD1Q6ZMT9 781 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 ADSSL1Q8N142 457 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 SETDB2Q96T68 719 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 KAT14Q9H8E8 782 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 TIAM2Q8IVF5 1701 aa22.28■■□□□ 1.16
CRLF3-201ENST00000324238 ITIH6Q6UXX5 1313 aa22.28■■□□□ 1.16
CRLF3-201ENST00000324238 PPP2R5BQ15173 497 aa22.28■■□□□ 1.16
CRLF3-201ENST00000324238 CCDC51Q96ER9 411 aa22.28■■□□□ 1.16
CRLF3-201ENST00000324238 NLRP3Q96P20 1036 aa22.28■■□□□ 1.16
CRLF3-201ENST00000324238 MTA3Q9BTC8 594 aa22.28■■□□□ 1.16
CRLF3-201ENST00000324238 TRIM21P19474 475 aaKnown RBP22.28■■□□□ 1.16
CRLF3-201ENST00000324238 USP5P45974 858 aa22.28■■□□□ 1.16
CRLF3-201ENST00000324238 PNMA1Q8ND90 353 aa22.28■■□□□ 1.16
CRLF3-201ENST00000324238 RABEP2Q9H5N1 569 aa22.28■■□□□ 1.16
CRLF3-201ENST00000324238 ATP2B2Q01814 1243 aa22.27■■□□□ 1.16
CRLF3-201ENST00000324238 SMARCAL1Q9NZC9 954 aa22.27■■□□□ 1.16
CRLF3-201ENST00000324238 CRNKL1Q9BZJ0 848 aaKnown RBP22.27■■□□□ 1.16
CRLF3-201ENST00000324238 MATR3P43243 847 aaKnown RBP eCLIP22.26■■□□□ 1.15
CRLF3-201ENST00000324238 CSGALNACT2Q8N6G5 542 aa22.26■■□□□ 1.15
CRLF3-201ENST00000324238 C8orf37Q96NL8 207 aa22.26■■□□□ 1.15
CRLF3-201ENST00000324238 ABCA3Q99758 1704 aa22.26■■□□□ 1.15
CRLF3-201ENST00000324238 PDE2AO00408 941 aaPredicted RBP22.26■■□□□ 1.15
CRLF3-201ENST00000324238 CYTH3O43739 400 aa22.26■■□□□ 1.15
CRLF3-201ENST00000324238 MYBL2P10244 700 aa22.26■■□□□ 1.15
CRLF3-201ENST00000324238 SPAG1Q07617 926 aa22.26■■□□□ 1.15
CRLF3-201ENST00000324238 STK4Q13043 487 aa22.26■■□□□ 1.15
CRLF3-201ENST00000324238 WHAMMP3Q1A5X7 153 aa22.26■■□□□ 1.15
CRLF3-201ENST00000324238 TSR1Q2NL82 804 aaKnown RBP22.26■■□□□ 1.15
CRLF3-201ENST00000324238 LETM2Q2VYF4 491 aa22.26■■□□□ 1.15
CRLF3-201ENST00000324238 EXOC4Q96A65 974 aa22.26■■□□□ 1.15
CRLF3-201ENST00000324238 TRIM34Q9BYJ4 488 aa22.26■■□□□ 1.15
CRLF3-201ENST00000324238 MKNK2Q9HBH9 465 aa22.26■■□□□ 1.15
CRLF3-201ENST00000324238 DOCK2Q92608 1830 aa22.25■■□□□ 1.15
CRLF3-201ENST00000324238 RASSF10A6NK89 507 aa22.25■■□□□ 1.15
CRLF3-201ENST00000324238 LGALS16A8MUM7 142 aa22.25■■□□□ 1.15
CRLF3-201ENST00000324238 KLRC4O43908 158 aa22.25■■□□□ 1.15
CRLF3-201ENST00000324238 TBC1D8BQ0IIM8 1120 aa22.25■■□□□ 1.15
CRLF3-201ENST00000324238 CAGE1Q8TC20 777 aa22.25■■□□□ 1.15
CRLF3-201ENST00000324238 TGFBRAP1Q8WUH2 860 aa22.25■■□□□ 1.15
CRLF3-201ENST00000324238 TUBGCP2Q9BSJ2 902 aa22.25■■□□□ 1.15
CRLF3-201ENST00000324238 JADE2Q9NQC1 790 aa22.25■■□□□ 1.15
CRLF3-201ENST00000324238 BCORQ6W2J9 1755 aa22.25■■□□□ 1.15
CRLF3-201ENST00000324238 H7C1D1 291 aa22.25■■□□□ 1.15
CRLF3-201ENST00000324238 FECHP22830 423 aa22.25■■□□□ 1.15
CRLF3-201ENST00000324238 MAPKAPK5Q8IW41 473 aa22.25■■□□□ 1.15
CRLF3-201ENST00000324238 HNRNPLLQ8WVV9 542 aaKnown RBP22.25■■□□□ 1.15
CRLF3-201ENST00000324238 MAGEC2Q9UBF1 373 aaPredicted RBP22.25■■□□□ 1.15
CRLF3-201ENST00000324238 FEZ2Q9UHY8 353 aaPredicted RBP22.25■■□□□ 1.15
CRLF3-201ENST00000324238 PCDHA6Q9UN73 950 aa22.25■■□□□ 1.15
CRLF3-201ENST00000324238 PCDHA8Q9Y5H6 950 aa22.25■■□□□ 1.15
CRLF3-201ENST00000324238 TULP2O00295 520 aa22.24■■□□□ 1.15
CRLF3-201ENST00000324238 ZPR1O75312 459 aa22.24■■□□□ 1.15
CRLF3-201ENST00000324238 PLCG1P19174 1290 aa22.24■■□□□ 1.15
CRLF3-201ENST00000324238 C2orf54Q08AI8 447 aa22.24■■□□□ 1.15
CRLF3-201ENST00000324238 KCTD19Q17RG1 926 aaPredicted RBP22.24■■□□□ 1.15
CRLF3-201ENST00000324238 HSP90B2PQ58FF3 399 aa22.24■■□□□ 1.15
CRLF3-201ENST00000324238 CT47A1Q5JQC4 288 aaPredicted RBP22.24■■□□□ 1.15
CRLF3-201ENST00000324238 ANKRD40Q6AI12 368 aa22.24■■□□□ 1.15
CRLF3-201ENST00000324238 ANKRD13CQ8N6S4 541 aa22.24■■□□□ 1.15
CRLF3-201ENST00000324238 SH3RF3Q8TEJ3 882 aaPredicted RBP22.24■■□□□ 1.15
CRLF3-201ENST00000324238 EHD2Q9NZN4 543 aa22.24■■□□□ 1.15
CRLF3-201ENST00000324238 PCDHA4Q9UN74 947 aa22.24■■□□□ 1.15
CRLF3-201ENST00000324238 DUOX1Q9NRD9 1551 aa22.24■■□□□ 1.15
CRLF3-201ENST00000324238 NFIXQ14938 502 aa22.24■■□□□ 1.15
CRLF3-201ENST00000324238 EZH2Q15910 746 aaKnown RBP22.24■■□□□ 1.15
CRLF3-201ENST00000324238 CCDC148Q8NFR7 591 aa22.24■■□□□ 1.15
CRLF3-201ENST00000324238 JAKMIP2Q96AA8 810 aa22.24■■□□□ 1.15
CRLF3-201ENST00000324238 DUSP9Q99956 384 aaKnown RBP22.24■■□□□ 1.15
CRLF3-201ENST00000324238 FAM204AQ9H8W3 233 aa22.24■■□□□ 1.15
CRLF3-201ENST00000324238 RMND1Q9NWS8 449 aa22.24■■□□□ 1.15
CRLF3-201ENST00000324238 SAR1BQ9Y6B6 198 aa22.24■■□□□ 1.15
CRLF3-201ENST00000324238 CXCR5P32302 372 aa22.23■■□□□ 1.15
CRLF3-201ENST00000324238 LONP1P36776 959 aaKnown RBP22.23■■□□□ 1.15
CRLF3-201ENST00000324238 PDE4DQ08499 809 aa22.23■■□□□ 1.15
CRLF3-201ENST00000324238 TXNRD1Q16881 649 aa22.23■■□□□ 1.15
CRLF3-201ENST00000324238 TRAPPC11Q7Z392 1133 aa22.23■■□□□ 1.15
CRLF3-201ENST00000324238 FBXO33Q7Z6M2 555 aa22.23■■□□□ 1.15
CRLF3-201ENST00000324238 ZNF507Q8TCN5 953 aa22.23■■□□□ 1.15
CRLF3-201ENST00000324238 TECP42680 631 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms