RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 FBXO11Q86XK2 927 aa31.59■■■□□ 2.65
CTDNEP1-201ENST00000318988 AMNQ9BXJ7 453 aa31.59■■■□□ 2.65
CTDNEP1-201ENST00000318988 STXBP3O00186 592 aa31.58■■■□□ 2.65
CTDNEP1-201ENST00000318988 F13A1P00488 732 aa31.58■■■□□ 2.65
CTDNEP1-201ENST00000318988 MMP1P03956 469 aa31.58■■■□□ 2.65
CTDNEP1-201ENST00000318988 CALML3P27482 149 aa31.58■■■□□ 2.65
CTDNEP1-201ENST00000318988 RANBP17Q9H2T7 1088 aaKnown RBP31.58■■■□□ 2.65
CTDNEP1-201ENST00000318988 HOXC10Q9NYD6 342 aa31.58■■■□□ 2.65
CTDNEP1-201ENST00000318988 AGTPBP1Q9UPW5 1226 aa31.58■■■□□ 2.65
CTDNEP1-201ENST00000318988 ATP6V1DQ9Y5K8 247 aa31.58■■■□□ 2.65
CTDNEP1-201ENST00000318988 TLL2Q9Y6L7 1015 aa31.58■■■□□ 2.65
CTDNEP1-201ENST00000318988 ZBED4O75132 1171 aa31.57■■■□□ 2.64
CTDNEP1-201ENST00000318988 TREML2Q5T2D2 321 aa31.57■■■□□ 2.64
CTDNEP1-201ENST00000318988 RGMBQ6NW40 437 aa31.57■■■□□ 2.64
CTDNEP1-201ENST00000318988 FERMT3Q86UX7 667 aa31.57■■■□□ 2.64
CTDNEP1-201ENST00000318988 PHF20Q9BVI0 1012 aa31.57■■■□□ 2.64
CTDNEP1-201ENST00000318988 ZSCAN16Q9H4T2 348 aaPredicted RBP31.57■■■□□ 2.64
CTDNEP1-201ENST00000318988 CCDC174Q6PII3 467 aa31.56■■■□□ 2.64
CTDNEP1-201ENST00000318988 COA7Q96BR5 231 aa31.56■■■□□ 2.64
CTDNEP1-201ENST00000318988 PCDHA1Q9Y5I3 950 aa31.56■■■□□ 2.64
CTDNEP1-201ENST00000318988 HOXA7P31268 230 aaPredicted RBP31.55■■■□□ 2.64
CTDNEP1-201ENST00000318988 IRX3P78415 501 aaPredicted RBP31.55■■■□□ 2.64
CTDNEP1-201ENST00000318988 PPP1R18Q6NYC8 613 aa31.55■■■□□ 2.64
CTDNEP1-201ENST00000318988 MYPNQ86TC9 1320 aa31.55■■■□□ 2.64
CTDNEP1-201ENST00000318988 DSG3P32926 999 aa31.54■■■□□ 2.64
CTDNEP1-201ENST00000318988 KRT2P35908 639 aa31.54■■■□□ 2.64
CTDNEP1-201ENST00000318988 GALNT17Q6IS24 598 aa31.54■■■□□ 2.64
CTDNEP1-201ENST00000318988 C6orf50Q9HD87 102 aa31.54■■■□□ 2.64
CTDNEP1-201ENST00000318988 CCL15-CCL14A0A0B4J2E2 113 aa31.54■■■□□ 2.64
CTDNEP1-201ENST00000318988 PPP1R11O60927 126 aaPredicted RBP31.54■■■□□ 2.64
CTDNEP1-201ENST00000318988 OSBPP22059 807 aa31.54■■■□□ 2.64
CTDNEP1-201ENST00000318988 GNA11P29992 359 aa31.54■■■□□ 2.64
CTDNEP1-201ENST00000318988 CCL15Q16663 113 aa31.54■■■□□ 2.64
CTDNEP1-201ENST00000318988 DIS3L2Q8IYB7 885 aaKnown RBP31.54■■■□□ 2.64
CTDNEP1-201ENST00000318988 PNMA2Q9UL42 364 aa31.54■■■□□ 2.64
CTDNEP1-201ENST00000318988 USH1GQ495M9 461 aa31.53■■■□□ 2.64
CTDNEP1-201ENST00000318988 RASAL3Q86YV0 1011 aa31.53■■■□□ 2.64
CTDNEP1-201ENST00000318988 TNPO1Q92973 898 aaKnown RBP31.53■■■□□ 2.64
CTDNEP1-201ENST00000318988 ATG4CQ96DT6 458 aa31.53■■■□□ 2.64
CTDNEP1-201ENST00000318988 SLC38A10Q9HBR0 1119 aa31.53■■■□□ 2.64
CTDNEP1-201ENST00000318988 PTPRFP10586 1907 aa31.52■■■□□ 2.64
CTDNEP1-201ENST00000318988 SMCO2A6NFE2 343 aa31.52■■■□□ 2.64
CTDNEP1-201ENST00000318988 VWA5AO00534 786 aa31.52■■■□□ 2.64
CTDNEP1-201ENST00000318988 KIF23Q02241 960 aaPredicted RBP31.52■■■□□ 2.64
CTDNEP1-201ENST00000318988 MS4A4AQ96JQ5 239 aa31.52■■■□□ 2.64
CTDNEP1-201ENST00000318988 MOGSQ13724 837 aa31.51■■■□□ 2.63
CTDNEP1-201ENST00000318988 TYW1BQ6NUM6 668 aa31.51■■■□□ 2.63
CTDNEP1-201ENST00000318988 BICD2Q8TD16 824 aa31.51■■■□□ 2.63
CTDNEP1-201ENST00000318988 CCDC102AQ96A19 550 aa31.51■■■□□ 2.63
CTDNEP1-201ENST00000318988 SHISA4Q96DD7 197 aa31.51■■■□□ 2.63
CTDNEP1-201ENST00000318988 ZMYND12Q9H0C1 365 aa31.51■■■□□ 2.63
CTDNEP1-201ENST00000318988 FOXP1Q9H334 677 aaPredicted RBP31.51■■■□□ 2.63
CTDNEP1-201ENST00000318988 PCDHA4Q9UN74 947 aa31.51■■■□□ 2.63
CTDNEP1-201ENST00000318988 LOC285556D6RIA3 1793 aa31.51■■■□□ 2.63
CTDNEP1-201ENST00000318988 ESYT2A0FGR8 921 aa31.5■■■□□ 2.63
CTDNEP1-201ENST00000318988 ICAM1P05362 532 aa31.5■■■□□ 2.63
CTDNEP1-201ENST00000318988 RESTQ13127 1097 aa31.5■■■□□ 2.63
CTDNEP1-201ENST00000318988 BRAPQ7Z569 592 aa31.5■■■□□ 2.63
CTDNEP1-201ENST00000318988 CPXCR1Q8N123 301 aa31.5■■■□□ 2.63
CTDNEP1-201ENST00000318988 GLT8D2Q9H1C3 349 aa31.5■■■□□ 2.63
CTDNEP1-201ENST00000318988 PNMA3Q9UL41 463 aa31.5■■■□□ 2.63
CTDNEP1-201ENST00000318988 CCPG1Q9ULG6 757 aa31.5■■■□□ 2.63
CTDNEP1-201ENST00000318988 BTBD18B2RXH4 712 aa31.49■■■□□ 2.63
CTDNEP1-201ENST00000318988 ADCY7P51828 1080 aa31.49■■■□□ 2.63
CTDNEP1-201ENST00000318988 BLIDQ8IZY5 108 aa31.49■■■□□ 2.63
CTDNEP1-201ENST00000318988 HHIPL1Q96JK4 782 aa31.49■■■□□ 2.63
CTDNEP1-201ENST00000318988 SPDYE16A6NNV3 312 aaPredicted RBP31.49■■■□□ 2.63
CTDNEP1-201ENST00000318988 FOXD4L6Q3SYB3 417 aaPredicted RBP31.49■■■□□ 2.63
CTDNEP1-201ENST00000318988 GPAT2Q6NUI2 795 aa31.49■■■□□ 2.63
CTDNEP1-201ENST00000318988 FOXD4L3Q6VB84 417 aaPredicted RBP31.49■■■□□ 2.63
CTDNEP1-201ENST00000318988 ASCC2Q9H1I8 757 aaPredicted RBP31.49■■■□□ 2.63
CTDNEP1-201ENST00000318988 MRPL11Q9Y3B7 192 aaKnown RBP31.49■■■□□ 2.63
CTDNEP1-201ENST00000318988 MRPL12P52815 198 aaKnown RBP31.48■■■□□ 2.63
CTDNEP1-201ENST00000318988 DAGLBQ8NCG7 672 aa31.48■■■□□ 2.63
CTDNEP1-201ENST00000318988 CUL5Q93034 780 aa31.48■■■□□ 2.63
CTDNEP1-201ENST00000318988 RAVER2Q9HCJ3 691 aaKnown RBP31.48■■■□□ 2.63
CTDNEP1-201ENST00000318988 ADAMTS5Q9UNA0 930 aa31.48■■■□□ 2.63
CTDNEP1-201ENST00000318988 ABCB11O95342 1321 aa31.47■■■□□ 2.63
CTDNEP1-201ENST00000318988 MANSC4A6NHS7 340 aaPredicted RBP31.47■■■□□ 2.63
CTDNEP1-201ENST00000318988 SLC10A3P09131 477 aa31.47■■■□□ 2.63
CTDNEP1-201ENST00000318988 U2AF2P26368 475 aaKnown RBP eCLIP31.47■■■□□ 2.63
CTDNEP1-201ENST00000318988 PAXIP1Q6ZW49 1069 aaPredicted RBP31.47■■■□□ 2.63
CTDNEP1-201ENST00000318988 MB21D1Q8N884 522 aa31.47■■■□□ 2.63
CTDNEP1-201ENST00000318988 BRI3BPQ8WY22 251 aa31.47■■■□□ 2.63
CTDNEP1-201ENST00000318988 GBP4Q96PP9 640 aa31.47■■■□□ 2.63
CTDNEP1-201ENST00000318988 P2RX7Q99572 595 aaKnown RBP31.47■■■□□ 2.63
CTDNEP1-201ENST00000318988 PSTPIP2Q9H939 334 aa31.47■■■□□ 2.63
CTDNEP1-201ENST00000318988 SLC45A1Q9Y2W3 748 aa31.47■■■□□ 2.63
CTDNEP1-201ENST00000318988 OAZ1P54368 228 aa31.46■■■□□ 2.63
CTDNEP1-201ENST00000318988 ANKRD23Q86SG2 305 aa31.46■■■□□ 2.63
CTDNEP1-201ENST00000318988 NOSTRINQ8IVI9 506 aa31.46■■■□□ 2.63
CTDNEP1-201ENST00000318988 OXER1Q8TDS5 423 aa31.46■■■□□ 2.63
CTDNEP1-201ENST00000318988 AGBL1Q96MI9 1066 aa31.46■■■□□ 2.63
CTDNEP1-201ENST00000318988 RIC8AQ9NPQ8 531 aa31.46■■■□□ 2.63
CTDNEP1-201ENST00000318988 KIF28PB7ZC32 967 aa31.45■■■□□ 2.63
CTDNEP1-201ENST00000318988 NR5A1Q13285 461 aa31.45■■■□□ 2.63
CTDNEP1-201ENST00000318988 BTBD19C9JJ37 291 aa31.44■■■□□ 2.62
CTDNEP1-201ENST00000318988 PDHXO00330 501 aa31.44■■■□□ 2.62
CTDNEP1-201ENST00000318988 HERVK_113P62684 666 aa31.44■■■□□ 2.62
CTDNEP1-201ENST00000318988 NPY5RQ15761 445 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms