RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 EIF6P56537 245 aaKnown RBP18■□□□□ 0.47
USH1C-202ENST00000318024 KRT40Q6A162 431 aa18■□□□□ 0.47
USH1C-202ENST00000318024 SH3BP5LQ7L8J4 393 aa18■□□□□ 0.47
USH1C-202ENST00000318024 RASGRP2Q7LDG7 609 aa18■□□□□ 0.47
USH1C-202ENST00000318024 CLEC10AQ8IUN9 316 aa18■□□□□ 0.47
USH1C-202ENST00000318024 CEP95Q96GE4 821 aa18■□□□□ 0.47
USH1C-202ENST00000318024 PSD3Q9NYI0 1048 aa18■□□□□ 0.47
USH1C-202ENST00000318024 FEZ2Q9UHY8 353 aaPredicted RBP18■□□□□ 0.47
USH1C-202ENST00000318024 MYH1P12882 1939 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 TCP10L2B9ZVM9 353 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 CUTAO60888 179 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 HLA-DOAP06340 250 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 AKR1B1P15121 316 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 PRELPP51888 382 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 GNG11P61952 73 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 NT5DC1Q5TFE4 455 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 TRIM22Q8IYM9 498 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 JMYQ8N9B5 988 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 NEDD1Q8NHV4 660 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 TMEM47Q9BQJ4 181 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 IDI2Q9BXS1 227 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 NID2Q14112 1375 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 DDAH1O94760 285 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 RCAN1P53805 252 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 DLGAP5Q15398 846 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 CTCFLQ8NI51 663 aaPredicted RBP17.99■□□□□ 0.47
USH1C-202ENST00000318024 MED15Q96RN5 788 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.99■□□□□ 0.47
USH1C-202ENST00000318024 TCP11L1Q9NUJ3 509 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 V9GY48 417 aaPredicted RBP17.99■□□□□ 0.47
USH1C-202ENST00000318024 MYO3BQ8WXR4 1341 aa17.99■□□□□ 0.47
USH1C-202ENST00000318024 DDX60LQ5H9U9 1706 aaKnown RBP17.98■□□□□ 0.47
USH1C-202ENST00000318024 SPDYE2BA6NHP3 402 aa17.98■□□□□ 0.47
USH1C-202ENST00000318024 FOXN1O15353 648 aa17.98■□□□□ 0.47
USH1C-202ENST00000318024 SPDYE6P0CI01 402 aa17.98■□□□□ 0.47
USH1C-202ENST00000318024 CALM1P0DP23 149 aa17.98■□□□□ 0.47
USH1C-202ENST00000318024 CALM2P0DP24 149 aa17.98■□□□□ 0.47
USH1C-202ENST00000318024 CALM3P0DP25 149 aa17.98■□□□□ 0.47
USH1C-202ENST00000318024 SHMT1P34896 483 aa17.98■□□□□ 0.47
USH1C-202ENST00000318024 SARSP49591 514 aaKnown RBP17.98■□□□□ 0.47
USH1C-202ENST00000318024 CIAPIN1Q6FI81 312 aa17.98■□□□□ 0.47
USH1C-202ENST00000318024 SRBD1Q8N5C6 995 aaKnown RBP17.98■□□□□ 0.47
USH1C-202ENST00000318024 SPON1Q9HCB6 807 aa17.98■□□□□ 0.47
USH1C-202ENST00000318024 ARFGAP3Q9NP61 516 aa17.98■□□□□ 0.47
USH1C-202ENST00000318024 HDAC9Q9UKV0 1011 aa17.98■□□□□ 0.47
USH1C-202ENST00000318024 SCAF8Q9UPN6 1271 aaKnown RBP17.98■□□□□ 0.47
USH1C-202ENST00000318024 ZNF646O15015 1829 aaPredicted RBP17.98■□□□□ 0.47
USH1C-202ENST00000318024 MPHOSPH10O00566 681 aaKnown RBP17.98■□□□□ 0.47
USH1C-202ENST00000318024 FMR1Q06787 632 aaKnown RBP eCLIP17.98■□□□□ 0.47
USH1C-202ENST00000318024 SHROOM1Q2M3G4 852 aaPredicted RBP17.98■□□□□ 0.47
USH1C-202ENST00000318024 STAG2Q8N3U4 1231 aa17.98■□□□□ 0.47
USH1C-202ENST00000318024 DHX58Q96C10 678 aa17.98■□□□□ 0.47
USH1C-202ENST00000318024 DNAJC18Q9H819 358 aa17.98■□□□□ 0.47
USH1C-202ENST00000318024 KCNH3Q9ULD8 1083 aa17.98■□□□□ 0.47
USH1C-202ENST00000318024 KCNJ14Q9UNX9 436 aa17.98■□□□□ 0.47
USH1C-202ENST00000318024 CCDC151A5D8V7 595 aa17.97■□□□□ 0.47
USH1C-202ENST00000318024 FUT2Q10981 343 aa17.97■□□□□ 0.47
USH1C-202ENST00000318024 SPECC1LQ69YQ0 1117 aa17.97■□□□□ 0.47
USH1C-202ENST00000318024 FAM177A1Q8N128 213 aaPredicted RBP17.97■□□□□ 0.47
USH1C-202ENST00000318024 ENOX1Q8TC92 643 aaKnown RBP17.97■□□□□ 0.47
USH1C-202ENST00000318024 TSPYL1Q9H0U9 437 aa17.97■□□□□ 0.47
USH1C-202ENST00000318024 MAN1B1Q9UKM7 699 aa17.97■□□□□ 0.47
USH1C-202ENST00000318024 H3BQF6 201 aa17.96■□□□□ 0.47
USH1C-202ENST00000318024 GOLGA8HP0CJ92 632 aa17.96■□□□□ 0.47
USH1C-202ENST00000318024 TXLNAP40222 546 aa17.96■□□□□ 0.47
USH1C-202ENST00000318024 RBM26Q5T8P6 1007 aaKnown RBP17.96■□□□□ 0.47
USH1C-202ENST00000318024 TMTC3Q6ZXV5 915 aa17.96■□□□□ 0.47
USH1C-202ENST00000318024 FHDC1Q9C0D6 1143 aaPredicted RBP17.96■□□□□ 0.47
USH1C-202ENST00000318024 VEZTQ9HBM0 779 aa17.96■□□□□ 0.47
USH1C-202ENST00000318024 RBM28Q9NW13 759 aaKnown RBP17.96■□□□□ 0.47
USH1C-202ENST00000318024 DEXIO95424 95 aa17.96■□□□□ 0.47
USH1C-202ENST00000318024 AKAP17AQ02040 695 aaKnown RBP17.96■□□□□ 0.47
USH1C-202ENST00000318024 TRIM29Q14134 588 aa17.96■□□□□ 0.47
USH1C-202ENST00000318024 PPP2R5BQ15173 497 aa17.96■□□□□ 0.47
USH1C-202ENST00000318024 CNNM3Q8NE01 707 aa17.96■□□□□ 0.47
USH1C-202ENST00000318024 AGBL3Q8NEM8 1001 aa17.96■□□□□ 0.47
USH1C-202ENST00000318024 ANKS1AQ92625 1134 aa17.96■□□□□ 0.47
USH1C-202ENST00000318024 GOLGA1Q92805 767 aa17.96■□□□□ 0.47
USH1C-202ENST00000318024 EXOC4Q96A65 974 aa17.96■□□□□ 0.47
USH1C-202ENST00000318024 MRPL44Q9H9J2 332 aaKnown RBP17.96■□□□□ 0.47
USH1C-202ENST00000318024 PI4KBQ9UBF8 816 aa17.96■□□□□ 0.47
USH1C-202ENST00000318024 STK36Q9NRP7 1315 aa17.95■□□□□ 0.46
USH1C-202ENST00000318024 ADKP55263 362 aaKnown RBP17.95■□□□□ 0.46
USH1C-202ENST00000318024 NR1I3Q14994 352 aa17.95■□□□□ 0.46
USH1C-202ENST00000318024 LONRF2Q1L5Z9 754 aa17.95■□□□□ 0.46
USH1C-202ENST00000318024 NBPF9Q3BBW0 867 aa17.95■□□□□ 0.46
USH1C-202ENST00000318024 JAKMIP3Q5VZ66 844 aa17.95■□□□□ 0.46
USH1C-202ENST00000318024 APTXQ7Z2E3 356 aaKnown RBP17.95■□□□□ 0.46
USH1C-202ENST00000318024 MSL3Q8N5Y2 521 aaKnown RBP17.95■□□□□ 0.46
USH1C-202ENST00000318024 HNRNPLLQ8WVV9 542 aaKnown RBP17.95■□□□□ 0.46
USH1C-202ENST00000318024 CCDC34Q96HJ3 373 aa17.95■□□□□ 0.46
USH1C-202ENST00000318024 DHX36Q9H2U1 1008 aaKnown RBP17.95■□□□□ 0.46
USH1C-202ENST00000318024 GJA3Q9Y6H8 435 aa17.95■□□□□ 0.46
USH1C-202ENST00000318024 VEGFAP15692 232 aaPredicted RBP17.95■□□□□ 0.46
USH1C-202ENST00000318024 MORC3Q14149 939 aa17.95■□□□□ 0.46
USH1C-202ENST00000318024 BRD3Q15059 726 aa17.95■□□□□ 0.46
USH1C-202ENST00000318024 PKN1Q16512 942 aa17.95■□□□□ 0.46
USH1C-202ENST00000318024 CCDC178Q5BJE1 867 aa17.95■□□□□ 0.46
USH1C-202ENST00000318024 IQUBQ8NA54 791 aa17.95■□□□□ 0.46
USH1C-202ENST00000318024 RNF26Q9BY78 433 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms