RNA–Protein interactions for RNA: ENST00000317620.13

PROM2-201, Transcript of prominin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PROM2, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-201ENST00000317620 PCDHA4Q9UN74 947 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 USTQ9Y2C2 406 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 COL4A3BPQ9Y5P4 624 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 PABPN1LA6NDY0 278 aaKnown RBP14.97□□□□□ -0.01
PROM2-201ENST00000317620 MECOMQ03112 1051 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 FAM102BQ5T8I3 360 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 KCTD1Q719H9 257 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 DAAM2Q86T65 1068 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 LRRC8AQ8IWT6 810 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 IFT20Q8IY31 132 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 SWAP70Q9UH65 585 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 KIAA1024Q9UPX6 916 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 SLC16A2P36021 539 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 ARL1P40616 181 aaPredicted RBP14.97□□□□□ -0.01
PROM2-201ENST00000317620 CFAP221Q4G0U5 840 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 MYO1AQ9UBC5 1043 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 MMP1P03956 469 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 CDC25AP30304 524 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 EAPPQ56P03 285 aaPredicted RBP14.97□□□□□ -0.01
PROM2-201ENST00000317620 CC2D2BQ6DHV5 1058 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 USP17L2Q6R6M4 530 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 GPR161Q8N6U8 529 aaKnown RBP14.97□□□□□ -0.01
PROM2-201ENST00000317620 CCPG1Q9ULG6 757 aa14.97□□□□□ -0.01
PROM2-201ENST00000317620 UTP11Q9Y3A2 253 aaKnown RBP14.97□□□□□ -0.01
PROM2-201ENST00000317620 HPDP32754 393 aaPredicted RBP14.96□□□□□ -0.01
PROM2-201ENST00000317620 PPM1FP49593 454 aaPredicted RBP14.96□□□□□ -0.01
PROM2-201ENST00000317620 ETF1P62495 437 aaKnown RBP14.96□□□□□ -0.01
PROM2-201ENST00000317620 ADAM9Q13443 819 aa14.96□□□□□ -0.01
PROM2-201ENST00000317620 KANSL2Q9H9L4 492 aa14.96□□□□□ -0.01
PROM2-201ENST00000317620 MLXIPQ9HAP2 919 aa14.96□□□□□ -0.01
PROM2-201ENST00000317620 SSX2IPQ9Y2D8 614 aa14.96□□□□□ -0.01
PROM2-201ENST00000317620 SAR1BQ9Y6B6 198 aa14.96□□□□□ -0.01
PROM2-201ENST00000317620 FAM169AQ9Y6X4 670 aa14.96□□□□□ -0.01
PROM2-201ENST00000317620 SETD1BQ9UPS6 1966 aaKnown RBP14.96□□□□□ -0.01
PROM2-201ENST00000317620 GRAPQ13588 217 aa14.96□□□□□ -0.01
PROM2-201ENST00000317620 TAF12Q16514 161 aa14.96□□□□□ -0.01
PROM2-201ENST00000317620 SEPT12Q8IYM1 358 aa14.96□□□□□ -0.01
PROM2-201ENST00000317620 ANKRD35Q8N283 1001 aa14.96□□□□□ -0.01
PROM2-201ENST00000317620 GRAPLQ8TC17 118 aaPredicted RBP14.96□□□□□ -0.01
PROM2-201ENST00000317620 U2AF1L4Q8WU68 220 aaKnown RBP14.96□□□□□ -0.01
PROM2-201ENST00000317620 NCAPD2Q15021 1401 aa14.96□□□□□ -0.01
PROM2-201ENST00000317620 COBLO75128 1261 aa14.96□□□□□ -0.02
PROM2-201ENST00000317620 MXRA7P84157 204 aa14.96□□□□□ -0.02
PROM2-201ENST00000317620 MCF2L2Q86YR7 1114 aa14.96□□□□□ -0.02
PROM2-201ENST00000317620 TDRD7Q8NHU6 1098 aaKnown RBP14.96□□□□□ -0.02
PROM2-201ENST00000317620 PIGSQ96S52 555 aa14.96□□□□□ -0.02
PROM2-201ENST00000317620 ASIC3Q9UHC3 531 aa14.96□□□□□ -0.02
PROM2-201ENST00000317620 GDF11O95390 407 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 ABCB4P21439 1286 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 GJA10Q969M2 543 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 TEKT3Q9BXF9 490 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 SORBS3O60504 671 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 RPS6KA4O75676 772 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 TBCKQ8TEA7 893 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.95□□□□□ -0.02
PROM2-201ENST00000317620 PPP2R2CQ9Y2T4 447 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 MNAT1P51948 309 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 SYCE1Q8N0S2 351 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 TSC1Q92574 1164 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 PGBD1Q96JS3 809 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 GPR101Q96P66 508 aaPredicted RBP14.95□□□□□ -0.02
PROM2-201ENST00000317620 K7ENM7 598 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 PABPC4Q13310 644 aaKnown RBP eCLIP14.95□□□□□ -0.02
PROM2-201ENST00000317620 CCDC121Q6ZUS5 278 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 SMYD4Q8IYR2 804 aaPredicted RBP14.95□□□□□ -0.02
PROM2-201ENST00000317620 COA7Q96BR5 231 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 TSKSQ9UJT2 592 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 TRPM1Q7Z4N2 1603 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 PNPLA6Q8IY17 1366 aa14.95□□□□□ -0.02
PROM2-201ENST00000317620 USP17L3A6NCW0 530 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 USP17L4A6NCW7 530 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 RESTQ13127 1097 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 ARHGAP27Q6ZUM4 889 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 USP17L1Q7RTZ2 530 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 GRAMD1CQ8IYS0 662 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 LARP4BQ92615 738 aaKnown RBP14.94□□□□□ -0.02
PROM2-201ENST00000317620 NRBP1Q9UHY1 535 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 RNF17Q9BXT8 1623 aaKnown RBP14.94□□□□□ -0.02
PROM2-201ENST00000317620 LAD1O00515 517 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 CYP2E1P05181 493 aaPredicted RBP14.94□□□□□ -0.02
PROM2-201ENST00000317620 POLR2FP61218 127 aaKnown RBP14.94□□□□□ -0.02
PROM2-201ENST00000317620 UAP1Q16222 522 aaPredicted RBP14.94□□□□□ -0.02
PROM2-201ENST00000317620 GBP6Q6ZN66 633 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 C11orf57Q6ZUT1 292 aaPredicted RBP14.94□□□□□ -0.02
PROM2-201ENST00000317620 KRT26Q7Z3Y9 468 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 FAM204AQ9H8W3 233 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 RAD17O75943 681 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 COPB1P53618 953 aaKnown RBP14.94□□□□□ -0.02
PROM2-201ENST00000317620 UBXN2AP68543 259 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 CCDC127Q96BQ5 260 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 ALKQ9UM73 1620 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 SLFN14P0C7P3 912 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 CCDC6Q16204 474 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 METTL13Q8N6R0 699 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 NKIRAS1Q9NYS0 192 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 SERPINA10Q9UK55 444 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 RABGAP1Q9Y3P9 1069 aa14.94□□□□□ -0.02
PROM2-201ENST00000317620 PRPF3O43395 683 aaKnown RBP14.93□□□□□ -0.02
PROM2-201ENST00000317620 ZNF500O60304 480 aaPredicted RBP14.93□□□□□ -0.02
PROM2-201ENST00000317620 SND1Q7KZF4 910 aaKnown RBP eCLIP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms