RNA–Protein interactions for RNA: ENST00000316738.11

EFCAB11-201, Transcript of EF-hand calcium binding domain 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EFCAB11, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-201ENST00000316738 DHX58Q96C10 678 aa12.5□□□□□ -0.41
EFCAB11-201ENST00000316738 KANSL2Q9H9L4 492 aa12.5□□□□□ -0.41
EFCAB11-201ENST00000316738 SPDYE2BA6NHP3 402 aa12.5□□□□□ -0.41
EFCAB11-201ENST00000316738 SPDYE6P0CI01 402 aa12.5□□□□□ -0.41
EFCAB11-201ENST00000316738 PTGS1P23219 599 aa12.5□□□□□ -0.41
EFCAB11-201ENST00000316738 RBM5P52756 815 aaKnown RBP eCLIP12.5□□□□□ -0.41
EFCAB11-201ENST00000316738 MYL5Q02045 173 aa12.5□□□□□ -0.41
EFCAB11-201ENST00000316738 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
EFCAB11-201ENST00000316738 SHROOM1Q2M3G4 852 aaPredicted RBP12.5□□□□□ -0.41
EFCAB11-201ENST00000316738 CCDC186Q7Z3E2 898 aa12.5□□□□□ -0.41
EFCAB11-201ENST00000316738 MTMR14Q8NCE2 650 aa12.5□□□□□ -0.41
EFCAB11-201ENST00000316738 UBE2Q2Q8WVN8 375 aa12.5□□□□□ -0.41
EFCAB11-201ENST00000316738 SMARCE1Q969G3 411 aa12.5□□□□□ -0.41
EFCAB11-201ENST00000316738 MED15Q96RN5 788 aa12.5□□□□□ -0.41
EFCAB11-201ENST00000316738 MTRQ99707 1265 aa12.5□□□□□ -0.41
EFCAB11-201ENST00000316738 HOMER1Q86YM7 354 aa12.49□□□□□ -0.41
EFCAB11-201ENST00000316738 DCAF4Q8WV16 495 aa12.49□□□□□ -0.41
EFCAB11-201ENST00000316738 EEF2P13639 858 aaKnown RBP12.49□□□□□ -0.41
EFCAB11-201ENST00000316738 SF3B2Q13435 895 aaKnown RBP12.49□□□□□ -0.41
EFCAB11-201ENST00000316738 NONOQ15233 471 aaKnown RBP eCLIP12.49□□□□□ -0.41
EFCAB11-201ENST00000316738 TMEM179Q6ZVK1 233 aa12.49□□□□□ -0.41
EFCAB11-201ENST00000316738 GMCL1P1Q8NEA9 526 aa12.49□□□□□ -0.41
EFCAB11-201ENST00000316738 GSDMAQ96QA5 445 aa12.49□□□□□ -0.41
EFCAB11-201ENST00000316738 VAT1LQ9HCJ6 419 aa12.49□□□□□ -0.41
EFCAB11-201ENST00000316738 SYNPO2Q9UMS6 1093 aa12.49□□□□□ -0.41
EFCAB11-201ENST00000316738 PSMD14O00487 310 aa12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 TGFB2P61812 414 aa12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 JAG1P78504 1218 aa12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 RRP1BQ14684 758 aaKnown RBP12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 TTBK2Q6IQ55 1244 aa12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 IQUBQ8NA54 791 aa12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 CCSER1Q9C0I3 900 aa12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 RIC8AQ9NPQ8 531 aa12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 PYCARDQ9ULZ3 195 aa12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 CNTNAP1P78357 1384 aa12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 FAM196BA6NMK8 535 aa12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 ENOX1Q8TC92 643 aaKnown RBP12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 ZBED3Q96IU2 234 aaPredicted RBP12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 GPCPD1Q9NPB8 672 aa12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 MPHOSPH10O00566 681 aaKnown RBP12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 ZBTB5O15062 677 aa12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 ZNF18P17022 549 aa12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 NAALADL2Q58DX5 795 aa12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 NEK8Q86SG6 692 aa12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 IMPACTQ9P2X3 320 aa12.48□□□□□ -0.41
EFCAB11-201ENST00000316738 SMC2O95347 1197 aa12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 ERCC5P28715 1186 aaPredicted RBP12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 FMR1Q06787 632 aaKnown RBP eCLIP12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 SOGA3Q5TF21 947 aa12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 DTHD1Q6ZMT9 781 aa12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 REXO1Q8N1G1 1221 aaKnown RBP12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 COA7Q96BR5 231 aa12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 CCDC34Q96HJ3 373 aa12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 GMCL1Q96IK5 515 aa12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 MTMR9Q96QG7 549 aa12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 XPO4Q9C0E2 1151 aaKnown RBP12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 ZNF277Q9NRM2 450 aaPredicted RBP12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 PGAP2Q9UHJ9 254 aa12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 CUL4BQ13620 913 aa12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 NOLC1Q14978 699 aaKnown RBP eCLIP12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 SEPT2Q15019 361 aa12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 SPDYE2Q495Y8 402 aa12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 FKBP1CQ5VVH2 108 aa12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 TBCKQ8TEA7 893 aa12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 CACTINQ8WUQ7 758 aaKnown RBP12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 DACH1Q9UI36 760 aa12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 HERC5Q9UII4 1024 aaKnown RBP12.47□□□□□ -0.41
EFCAB11-201ENST00000316738 ATP1A3P13637 1013 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 ADCY7P51828 1080 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 TPM4P67936 248 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 FANCCQ00597 558 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 LRRC8AQ8IWT6 810 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 LARGE2Q8N3Y3 721 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 AGBL3Q8NEM8 1001 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 FAM151AQ8WW52 585 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 AK8Q96MA6 479 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 DISC1Q9NRI5 854 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 TMEM260Q9NX78 707 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 BIN2Q9UBW5 565 aaPredicted RBP12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 ZNF70Q9UC06 446 aaPredicted RBP12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 ZNRF3Q9ULT6 936 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 MYH7BA7E2Y1 1941 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 USP17L10C9JJH3 530 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 ABCB5Q2M3G0 1257 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 KCTD1Q719H9 257 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 FANCLQ9NW38 375 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 IFNKQ9P0W0 207 aa12.46□□□□□ -0.41
EFCAB11-201ENST00000316738 PPP1R3GB7ZBB8 358 aa12.46□□□□□ -0.42
EFCAB11-201ENST00000316738 GTPBP6O43824 516 aaPredicted RBP12.46□□□□□ -0.42
EFCAB11-201ENST00000316738 RAD17O75943 681 aa12.46□□□□□ -0.42
EFCAB11-201ENST00000316738 OR52Z1P0C646 297 aa12.46□□□□□ -0.42
EFCAB11-201ENST00000316738 LMOD1P29536 600 aaPredicted RBP12.46□□□□□ -0.42
EFCAB11-201ENST00000316738 SLC16A2P36021 539 aa12.46□□□□□ -0.42
EFCAB11-201ENST00000316738 DRC7Q8IY82 874 aa12.46□□□□□ -0.42
EFCAB11-201ENST00000316738 IGSF22Q8N9C0 903 aa12.46□□□□□ -0.42
EFCAB11-201ENST00000316738 LRRC15Q8TF66 581 aa12.46□□□□□ -0.42
EFCAB11-201ENST00000316738 TBC1D12O60347 775 aa12.45□□□□□ -0.42
EFCAB11-201ENST00000316738 CCNT1O60563 726 aaKnown RBP12.45□□□□□ -0.42
EFCAB11-201ENST00000316738 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms