RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 SMC2O95347 1197 aa20.84■□□□□ 0.93
CCDC43-201ENST00000315286 GDF11O95390 407 aa20.84■□□□□ 0.93
CCDC43-201ENST00000315286 LETM2Q2VYF4 491 aa20.84■□□□□ 0.93
CCDC43-201ENST00000315286 MLKLQ8NB16 471 aa20.84■□□□□ 0.93
CCDC43-201ENST00000315286 IFNKQ9P0W0 207 aa20.84■□□□□ 0.93
CCDC43-201ENST00000315286 ZBTB12Q9Y330 459 aaPredicted RBP20.84■□□□□ 0.93
CCDC43-201ENST00000315286 KIF13BQ9NQT8 1826 aa20.84■□□□□ 0.93
CCDC43-201ENST00000315286 SPDYE2BA6NHP3 402 aa20.84■□□□□ 0.93
CCDC43-201ENST00000315286 USP17L10C9JJH3 530 aa20.84■□□□□ 0.93
CCDC43-201ENST00000315286 RAD21O60216 631 aa20.84■□□□□ 0.93
CCDC43-201ENST00000315286 SPDYE6P0CI01 402 aa20.84■□□□□ 0.93
CCDC43-201ENST00000315286 ATP1A3P13637 1013 aa20.84■□□□□ 0.93
CCDC43-201ENST00000315286 DPYDQ12882 1025 aa20.84■□□□□ 0.93
CCDC43-201ENST00000315286 LRMPQ12912 555 aa20.84■□□□□ 0.93
CCDC43-201ENST00000315286 STAMQ92783 540 aa20.84■□□□□ 0.93
CCDC43-201ENST00000315286 XPO4Q9C0E2 1151 aaKnown RBP20.84■□□□□ 0.93
CCDC43-201ENST00000315286 LAD1O00515 517 aa20.83■□□□□ 0.93
CCDC43-201ENST00000315286 CCNT1O60563 726 aaKnown RBP20.83■□□□□ 0.93
CCDC43-201ENST00000315286 ABCB5Q2M3G0 1257 aa20.83■□□□□ 0.93
CCDC43-201ENST00000315286 PDXDC2PQ6P474 469 aa20.83■□□□□ 0.93
CCDC43-201ENST00000315286 TMEM179Q6ZVK1 233 aa20.83■□□□□ 0.93
CCDC43-201ENST00000315286 NEK8Q86SG6 692 aa20.83■□□□□ 0.93
CCDC43-201ENST00000315286 KIAA1524Q8TCG1 905 aa20.83■□□□□ 0.93
CCDC43-201ENST00000315286 TBCKQ8TEA7 893 aa20.83■□□□□ 0.93
CCDC43-201ENST00000315286 FBXO41Q8TF61 875 aa20.83■□□□□ 0.93
CCDC43-201ENST00000315286 CSRNP1Q96S65 589 aa20.83■□□□□ 0.93
CCDC43-201ENST00000315286 CLRN2A0PK11 232 aa20.82■□□□□ 0.92
CCDC43-201ENST00000315286 TCP10L2B9ZVM9 353 aa20.82■□□□□ 0.92
CCDC43-201ENST00000315286 ADCY7P51828 1080 aa20.82■□□□□ 0.92
CCDC43-201ENST00000315286 JAG1P78504 1218 aa20.82■□□□□ 0.92
CCDC43-201ENST00000315286 NOLC1Q14978 699 aaKnown RBP eCLIP20.82■□□□□ 0.92
CCDC43-201ENST00000315286 CACTINQ8WUQ7 758 aaKnown RBP20.82■□□□□ 0.92
CCDC43-201ENST00000315286 MTMR8Q96EF0 704 aa20.82■□□□□ 0.92
CCDC43-201ENST00000315286 PYM1Q9BRP8 204 aaKnown RBP20.82■□□□□ 0.92
CCDC43-201ENST00000315286 FANCLQ9NW38 375 aa20.82■□□□□ 0.92
CCDC43-201ENST00000315286 ZBTB7AO95365 584 aa20.82■□□□□ 0.92
CCDC43-201ENST00000315286 FANCCQ00597 558 aa20.82■□□□□ 0.92
CCDC43-201ENST00000315286 ICA1Q05084 483 aa20.82■□□□□ 0.92
CCDC43-201ENST00000315286 FMR1Q06787 632 aaKnown RBP eCLIP20.82■□□□□ 0.92
CCDC43-201ENST00000315286 RRP1BQ14684 758 aaKnown RBP20.82■□□□□ 0.92
CCDC43-201ENST00000315286 SLFN13Q68D06 897 aa20.82■□□□□ 0.92
CCDC43-201ENST00000315286 MTRQ99707 1265 aa20.82■□□□□ 0.92
CCDC43-201ENST00000315286 PP2D1A8MPX8 630 aa20.81■□□□□ 0.92
CCDC43-201ENST00000315286 ZBTB5O15062 677 aa20.81■□□□□ 0.92
CCDC43-201ENST00000315286 TXLNAP40222 546 aa20.81■□□□□ 0.92
CCDC43-201ENST00000315286 PRPHP41219 470 aa20.81■□□□□ 0.92
CCDC43-201ENST00000315286 SLC1A4P43007 532 aa20.81■□□□□ 0.92
CCDC43-201ENST00000315286 KARSQ15046 597 aaKnown RBP20.81■□□□□ 0.92
CCDC43-201ENST00000315286 DLGAP5Q15398 846 aa20.81■□□□□ 0.92
CCDC43-201ENST00000315286 FILIP1Q7Z7B0 1213 aa20.81■□□□□ 0.92
CCDC43-201ENST00000315286 TMOD2Q9NZR1 351 aa20.81■□□□□ 0.92
CCDC43-201ENST00000315286 DACH1Q9UI36 760 aa20.81■□□□□ 0.92
CCDC43-201ENST00000315286 HDAC9Q9UKV0 1011 aa20.81■□□□□ 0.92
CCDC43-201ENST00000315286 COL2A1P02458 1487 aaPredicted RBP20.81■□□□□ 0.92
CCDC43-201ENST00000315286 ARID5BQ14865 1188 aa20.81■□□□□ 0.92
CCDC43-201ENST00000315286 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.81■□□□□ 0.92
CCDC43-201ENST00000315286 OGFOD1Q8N543 542 aa20.81■□□□□ 0.92
CCDC43-201ENST00000315286 DCAF4Q8WV16 495 aa20.81■□□□□ 0.92
CCDC43-201ENST00000315286 GSDMAQ96QA5 445 aa20.81■□□□□ 0.92
CCDC43-201ENST00000315286 VPS33BQ9H267 617 aa20.81■□□□□ 0.92
CCDC43-201ENST00000315286 ZNF70Q9UC06 446 aaPredicted RBP20.81■□□□□ 0.92
CCDC43-201ENST00000315286 ZNRF3Q9ULT6 936 aa20.81■□□□□ 0.92
CCDC43-201ENST00000315286 NEMFO60524 1076 aa20.8■□□□□ 0.92
CCDC43-201ENST00000315286 GH2P01242 217 aa20.8■□□□□ 0.92
CCDC43-201ENST00000315286 OR52Z1P0C646 297 aa20.8■□□□□ 0.92
CCDC43-201ENST00000315286 PPP1R18Q6NYC8 613 aa20.8■□□□□ 0.92
CCDC43-201ENST00000315286 BLZF1Q9H2G9 400 aa20.8■□□□□ 0.92
CCDC43-201ENST00000315286 PIM2Q9P1W9 311 aa20.8■□□□□ 0.92
CCDC43-201ENST00000315286 RBM26Q5T8P6 1007 aaKnown RBP20.79■□□□□ 0.92
CCDC43-201ENST00000315286 MED15Q96RN5 788 aa20.79■□□□□ 0.92
CCDC43-201ENST00000315286 RIC8AQ9NPQ8 531 aa20.79■□□□□ 0.92
CCDC43-201ENST00000315286 F5H6K3 240 aa20.79■□□□□ 0.92
CCDC43-201ENST00000315286 EDIL3O43854 480 aa20.79■□□□□ 0.92
CCDC43-201ENST00000315286 KLRC3Q07444 240 aa20.79■□□□□ 0.92
CCDC43-201ENST00000315286 LRRC8AQ8IWT6 810 aa20.79■□□□□ 0.92
CCDC43-201ENST00000315286 NIM1KQ8IY84 436 aa20.79■□□□□ 0.92
CCDC43-201ENST00000315286 TRMT44Q8IYL2 757 aaKnown RBP20.79■□□□□ 0.92
CCDC43-201ENST00000315286 ENOX1Q8TC92 643 aaKnown RBP20.79■□□□□ 0.92
CCDC43-201ENST00000315286 DISC1Q9NRI5 854 aa20.79■□□□□ 0.92
CCDC43-201ENST00000315286 SPTLC3Q9NUV7 552 aa20.79■□□□□ 0.92
CCDC43-201ENST00000315286 ATF5Q9Y2D1 282 aaPredicted RBP20.79■□□□□ 0.92
CCDC43-201ENST00000315286 UBA7P41226 1012 aa20.78■□□□□ 0.92
CCDC43-201ENST00000315286 STAT6P42226 847 aa20.78■□□□□ 0.92
CCDC43-201ENST00000315286 TGFB2P61812 414 aa20.78■□□□□ 0.92
CCDC43-201ENST00000315286 CUL4BQ13620 913 aa20.78■□□□□ 0.92
CCDC43-201ENST00000315286 UBE2SQ16763 222 aa20.78■□□□□ 0.92
CCDC43-201ENST00000315286 DPF2Q92785 391 aa20.78■□□□□ 0.92
CCDC43-201ENST00000315286 CCSER1Q9C0I3 900 aa20.78■□□□□ 0.92
CCDC43-201ENST00000315286 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.78■□□□□ 0.92
CCDC43-201ENST00000315286 GTPBP6O43824 516 aaPredicted RBP20.77■□□□□ 0.92
CCDC43-201ENST00000315286 CD44P16070 742 aaKnown RBP20.77■□□□□ 0.92
CCDC43-201ENST00000315286 NAALADL2Q58DX5 795 aa20.77■□□□□ 0.92
CCDC43-201ENST00000315286 FAM151AQ8WW52 585 aa20.77■□□□□ 0.92
CCDC43-201ENST00000315286 HERC5Q9UII4 1024 aaKnown RBP20.77■□□□□ 0.92
CCDC43-201ENST00000315286 NFE2L3Q9Y4A8 694 aa20.77■□□□□ 0.92
CCDC43-201ENST00000315286 MYO1BO43795 1136 aa20.77■□□□□ 0.92
CCDC43-201ENST00000315286 SERPINC1P01008 464 aa20.77■□□□□ 0.92
CCDC43-201ENST00000315286 ERCC5P28715 1186 aaPredicted RBP20.77■□□□□ 0.92
CCDC43-201ENST00000315286 CLK2P49760 499 aaKnown RBP20.77■□□□□ 0.92
CCDC43-201ENST00000315286 UBASH3AP57075 661 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms