RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 MUM1L1Q5H9M0 696 aa17.18■□□□□ 0.34
PPP1CA-201ENST00000312989 CYB5R4Q7L1T6 521 aa17.18■□□□□ 0.34
PPP1CA-201ENST00000312989 FAM133AQ8N9E0 248 aa17.18■□□□□ 0.34
PPP1CA-201ENST00000312989 MAP4K1Q92918 833 aa17.18■□□□□ 0.34
PPP1CA-201ENST00000312989 ZSCAN10Q96SZ4 725 aaPredicted RBP17.18■□□□□ 0.34
PPP1CA-201ENST00000312989 KATNBL1Q9H079 304 aa17.18■□□□□ 0.34
PPP1CA-201ENST00000312989 C11orf49Q9H6J7 331 aa17.18■□□□□ 0.34
PPP1CA-201ENST00000312989 SLC5A4Q9NY91 659 aa17.18■□□□□ 0.34
PPP1CA-201ENST00000312989 NRBP1Q9UHY1 535 aa17.18■□□□□ 0.34
PPP1CA-201ENST00000312989 MTMR7Q9Y216 660 aa17.18■□□□□ 0.34
PPP1CA-201ENST00000312989 ALPK3Q96L96 1907 aa17.18■□□□□ 0.34
PPP1CA-201ENST00000312989 TNKSO95271 1327 aa17.18■□□□□ 0.34
PPP1CA-201ENST00000312989 CCDC96Q2M329 555 aa17.17■□□□□ 0.34
PPP1CA-201ENST00000312989 SYDE2Q5VT97 1194 aa17.17■□□□□ 0.34
PPP1CA-201ENST00000312989 ZNF467Q7Z7K2 595 aaPredicted RBP17.17■□□□□ 0.34
PPP1CA-201ENST00000312989 HTATIP2Q9BUP3 242 aa17.17■□□□□ 0.34
PPP1CA-201ENST00000312989 GPCPD1Q9NPB8 672 aa17.17■□□□□ 0.34
PPP1CA-201ENST00000312989 RNF146Q9NTX7 359 aa17.17■□□□□ 0.34
PPP1CA-201ENST00000312989 MSCO60682 206 aa17.16■□□□□ 0.34
PPP1CA-201ENST00000312989 ICAM1P05362 532 aa17.16■□□□□ 0.34
PPP1CA-201ENST00000312989 CNTN2Q02246 1040 aa17.16■□□□□ 0.34
PPP1CA-201ENST00000312989 ANO1Q5XXA6 986 aa17.16■□□□□ 0.34
PPP1CA-201ENST00000312989 CCDC174Q6PII3 467 aa17.16■□□□□ 0.34
PPP1CA-201ENST00000312989 MSL3Q8N5Y2 521 aaKnown RBP17.16■□□□□ 0.34
PPP1CA-201ENST00000312989 RUFY2Q8WXA3 655 aa17.16■□□□□ 0.34
PPP1CA-201ENST00000312989 LSG1Q9H089 658 aaKnown RBP17.16■□□□□ 0.34
PPP1CA-201ENST00000312989 CPVLQ9H3G5 476 aa17.16■□□□□ 0.34
PPP1CA-201ENST00000312989 ACAD9Q9H845 621 aa17.16■□□□□ 0.34
PPP1CA-201ENST00000312989 HOMER2Q9NSB8 354 aa17.16■□□□□ 0.34
PPP1CA-201ENST00000312989 FBXO40Q9UH90 709 aa17.16■□□□□ 0.34
PPP1CA-201ENST00000312989 SYNGAP1Q96PV0 1343 aa17.16■□□□□ 0.34
PPP1CA-201ENST00000312989 SOWAHBA6NEL2 793 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 ADCY6O43306 1168 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 GOLGA8HP0CJ92 632 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 BMP2KLQ5H9B9 411 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 PNMA1Q8ND90 353 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 DPF3Q92784 378 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 LENG1Q96BZ8 264 aaPredicted RBP17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 KRT23Q9C075 422 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 DNM1LO00429 736 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 CNGA1P29973 690 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 SLC4A3P48751 1232 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 ANTXR2P58335 489 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 IKQ13123 557 aaPredicted RBP17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 SLC35G1Q2M3R5 365 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 TKFCQ3LXA3 575 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 IQCA1Q86XH1 822 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 CLEC4DQ8WXI8 215 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 DDX11Q96FC9 970 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 TRERF1Q96PN7 1200 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 ESYT1Q9BSJ8 1104 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 CNNM2Q9H8M5 875 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 SENP2Q9HC62 589 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 PCDH10Q9P2E7 1040 aa17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 ISY1Q9ULR0 285 aaKnown RBP17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 DDX49Q9Y6V7 483 aaKnown RBP17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
PPP1CA-201ENST00000312989 LAMA3Q16787 3333 aa17.14■□□□□ 0.33
PPP1CA-201ENST00000312989 E7EWF7 191 aa17.14■□□□□ 0.33
PPP1CA-201ENST00000312989 ALAS1P13196 640 aa17.14■□□□□ 0.33
PPP1CA-201ENST00000312989 LRRC26Q2I0M4 334 aa17.14■□□□□ 0.33
PPP1CA-201ENST00000312989 ANKRD35Q8N283 1001 aa17.14■□□□□ 0.33
PPP1CA-201ENST00000312989 PURBQ96QR8 312 aaKnown RBP17.14■□□□□ 0.33
PPP1CA-201ENST00000312989 CYP39A1Q9NYL5 469 aa17.14■□□□□ 0.33
PPP1CA-201ENST00000312989 CCPG1Q9ULG6 757 aa17.14■□□□□ 0.33
PPP1CA-201ENST00000312989 COLQQ9Y215 455 aaPredicted RBP17.14■□□□□ 0.33
PPP1CA-201ENST00000312989 RBM8AQ9Y5S9 174 aaKnown RBP17.14■□□□□ 0.33
PPP1CA-201ENST00000312989 WDR19Q8NEZ3 1342 aa17.13■□□□□ 0.33
PPP1CA-201ENST00000312989 NFIBO00712 420 aa17.13■□□□□ 0.33
PPP1CA-201ENST00000312989 ADAMTS4O75173 837 aa17.13■□□□□ 0.33
PPP1CA-201ENST00000312989 CCDC178Q5BJE1 867 aa17.13■□□□□ 0.33
PPP1CA-201ENST00000312989 GPATCH4Q5T3I0 446 aaKnown RBP17.13■□□□□ 0.33
PPP1CA-201ENST00000312989 GJC2Q5T442 439 aaPredicted RBP17.13■□□□□ 0.33
PPP1CA-201ENST00000312989 MB21D2Q8IYB1 491 aaPredicted RBP17.13■□□□□ 0.33
PPP1CA-201ENST00000312989 UBA5Q9GZZ9 404 aa17.13■□□□□ 0.33
PPP1CA-201ENST00000312989 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.13■□□□□ 0.33
PPP1CA-201ENST00000312989 CTDP1Q9Y5B0 961 aaPredicted RBP17.13■□□□□ 0.33
PPP1CA-201ENST00000312989 PLXNA1Q9UIW2 1896 aa17.13■□□□□ 0.33
PPP1CA-201ENST00000312989 CEP290O15078 2479 aa17.13■□□□□ 0.33
PPP1CA-201ENST00000312989 LCTP09848 1927 aa17.12■□□□□ 0.33
PPP1CA-201ENST00000312989 LRRC41Q15345 812 aa17.12■□□□□ 0.33
PPP1CA-201ENST00000312989 ARMCX2Q7L311 632 aa17.12■□□□□ 0.33
PPP1CA-201ENST00000312989 CCDC144CPQ8IYA2 1237 aa17.12■□□□□ 0.33
PPP1CA-201ENST00000312989 KAT14Q9H8E8 782 aa17.12■□□□□ 0.33
PPP1CA-201ENST00000312989 ZNFX1Q9P2E3 1918 aaKnown RBP17.12■□□□□ 0.33
PPP1CA-201ENST00000312989 LRRC37A2A6NM11 1700 aa17.11■□□□□ 0.33
PPP1CA-201ENST00000312989 POTEB2H3BUK9 544 aa17.11■□□□□ 0.33
PPP1CA-201ENST00000312989 EVI5O60447 810 aa17.11■□□□□ 0.33
PPP1CA-201ENST00000312989 AKR1A1P14550 325 aa17.11■□□□□ 0.33
PPP1CA-201ENST00000312989 IRX5P78411 483 aaPredicted RBP17.11■□□□□ 0.33
PPP1CA-201ENST00000312989 HABP4Q5JVS0 413 aaKnown RBP17.11■□□□□ 0.33
PPP1CA-201ENST00000312989 CCSAPQ6IQ19 270 aaPredicted RBP17.11■□□□□ 0.33
PPP1CA-201ENST00000312989 STAG2Q8N3U4 1231 aa17.11■□□□□ 0.33
PPP1CA-201ENST00000312989 MORC4Q8TE76 937 aa17.11■□□□□ 0.33
PPP1CA-201ENST00000312989 CTAGE5O15320 804 aa17.1■□□□□ 0.33
PPP1CA-201ENST00000312989 ACVR2BQ13705 512 aa17.1■□□□□ 0.33
PPP1CA-201ENST00000312989 SNX17Q15036 470 aa17.1■□□□□ 0.33
PPP1CA-201ENST00000312989 NECTIN1Q15223 517 aa17.1■□□□□ 0.33
PPP1CA-201ENST00000312989 ASPRV1Q53RT3 343 aa17.1■□□□□ 0.33
PPP1CA-201ENST00000312989 SLC30A10Q6XR72 485 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms