RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 HSPA4P34932 840 aa23.11■■□□□ 1.29
VEGFB-201ENST00000309422 TTBK2Q6IQ55 1244 aa23.11■■□□□ 1.29
VEGFB-201ENST00000309422 RNF146Q9NTX7 359 aa23.11■■□□□ 1.29
VEGFB-201ENST00000309422 SLC12A7Q9Y666 1083 aa23.11■■□□□ 1.29
VEGFB-201ENST00000309422 TSGA10IPQ3SY00 556 aa23.1■■□□□ 1.29
VEGFB-201ENST00000309422 DHX32Q7L7V1 743 aaKnown RBP23.1■■□□□ 1.29
VEGFB-201ENST00000309422 JAKMIP1Q96N16 626 aaKnown RBP23.1■■□□□ 1.29
VEGFB-201ENST00000309422 RNF208Q9H0X6 261 aa23.1■■□□□ 1.29
VEGFB-201ENST00000309422 SH2B2O14492 632 aaPredicted RBP23.09■■□□□ 1.29
VEGFB-201ENST00000309422 HOXC6P09630 235 aa23.09■■□□□ 1.29
VEGFB-201ENST00000309422 ANTXR2P58335 489 aa23.09■■□□□ 1.29
VEGFB-201ENST00000309422 TRAF1Q13077 416 aa23.09■■□□□ 1.29
VEGFB-201ENST00000309422 BLOC1S2Q6QNY1 142 aa23.09■■□□□ 1.29
VEGFB-201ENST00000309422 TRERF1Q96PN7 1200 aa23.09■■□□□ 1.29
VEGFB-201ENST00000309422 PFASO15067 1338 aa23.08■■□□□ 1.29
VEGFB-201ENST00000309422 CCL5P13501 91 aa23.08■■□□□ 1.29
VEGFB-201ENST00000309422 LIFRP42702 1097 aa23.08■■□□□ 1.29
VEGFB-201ENST00000309422 GNAQP50148 359 aa23.08■■□□□ 1.29
VEGFB-201ENST00000309422 ZNF654Q8IZM8 581 aa23.08■■□□□ 1.29
VEGFB-201ENST00000309422 TRIB2Q92519 343 aa23.08■■□□□ 1.29
VEGFB-201ENST00000309422 USP6NLQ92738 828 aa23.08■■□□□ 1.29
VEGFB-201ENST00000309422 LY9Q9HBG7 655 aa23.08■■□□□ 1.29
VEGFB-201ENST00000309422 HMX1Q9NP08 348 aaPredicted RBP23.08■■□□□ 1.29
VEGFB-201ENST00000309422 PARP14Q460N5 1801 aa23.08■■□□□ 1.28
VEGFB-201ENST00000309422 RLFQ13129 1914 aa23.07■■□□□ 1.28
VEGFB-201ENST00000309422 KLRF2D3W0D1 207 aa23.07■■□□□ 1.28
VEGFB-201ENST00000309422 PRKAR2AP13861 404 aaKnown RBP23.07■■□□□ 1.28
VEGFB-201ENST00000309422 SNAP25P60880 206 aa23.07■■□□□ 1.28
VEGFB-201ENST00000309422 GRM4Q14833 912 aa23.07■■□□□ 1.28
VEGFB-201ENST00000309422 CDC37Q16543 378 aaPredicted RBP23.07■■□□□ 1.28
VEGFB-201ENST00000309422 IGDCC4Q8TDY8 1250 aa23.07■■□□□ 1.28
VEGFB-201ENST00000309422 AGBL1Q96MI9 1066 aa23.07■■□□□ 1.28
VEGFB-201ENST00000309422 UBA5Q9GZZ9 404 aa23.07■■□□□ 1.28
VEGFB-201ENST00000309422 ZNF236Q9UL36 1845 aa23.06■■□□□ 1.28
VEGFB-201ENST00000309422 OLFML2BQ68BL8 750 aa23.06■■□□□ 1.28
VEGFB-201ENST00000309422 MAP3K14Q99558 947 aa23.06■■□□□ 1.28
VEGFB-201ENST00000309422 NAP1L2Q9ULW6 460 aaPredicted RBP23.06■■□□□ 1.28
VEGFB-201ENST00000309422 DIS3Q9Y2L1 958 aaKnown RBP23.06■■□□□ 1.28
VEGFB-201ENST00000309422 RIPK3Q9Y572 518 aa23.06■■□□□ 1.28
VEGFB-201ENST00000309422 RPTORQ8N122 1335 aa23.06■■□□□ 1.28
VEGFB-201ENST00000309422 CAPN2P17655 700 aa23.05■■□□□ 1.28
VEGFB-201ENST00000309422 RASEFQ8IZ41 740 aa23.05■■□□□ 1.28
VEGFB-201ENST00000309422 ADGRF4Q8IZF3 695 aa23.05■■□□□ 1.28
VEGFB-201ENST00000309422 MPHOSPH6Q99547 160 aaKnown RBP23.05■■□□□ 1.28
VEGFB-201ENST00000309422 LZTS2Q9BRK4 669 aa23.05■■□□□ 1.28
VEGFB-201ENST00000309422 LRRC2Q9BYS8 371 aa23.05■■□□□ 1.28
VEGFB-201ENST00000309422 VAT1LQ9HCJ6 419 aa23.05■■□□□ 1.28
VEGFB-201ENST00000309422 SNX14Q9Y5W7 946 aa23.05■■□□□ 1.28
VEGFB-201ENST00000309422 POTEB2H3BUK9 544 aa23.04■■□□□ 1.28
VEGFB-201ENST00000309422 NSMFQ6X4W1 530 aa23.04■■□□□ 1.28
VEGFB-201ENST00000309422 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.04■■□□□ 1.28
VEGFB-201ENST00000309422 SEC63Q9UGP8 760 aaKnown RBP23.04■■□□□ 1.28
VEGFB-201ENST00000309422 ZNF536O15090 1300 aa23.04■■□□□ 1.28
VEGFB-201ENST00000309422 PLXNB2O15031 1838 aa23.04■■□□□ 1.28
VEGFB-201ENST00000309422 PGK2P07205 417 aa23.03■■□□□ 1.28
VEGFB-201ENST00000309422 CASTP20810 708 aaKnown RBP23.03■■□□□ 1.28
VEGFB-201ENST00000309422 TROAPQ12815 778 aa23.03■■□□□ 1.28
VEGFB-201ENST00000309422 MTFR1Q15390 333 aa23.03■■□□□ 1.28
VEGFB-201ENST00000309422 CCL14Q16627 93 aa23.03■■□□□ 1.28
VEGFB-201ENST00000309422 USH1GQ495M9 461 aa23.03■■□□□ 1.28
VEGFB-201ENST00000309422 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.03■■□□□ 1.28
VEGFB-201ENST00000309422 MICU3Q86XE3 530 aa23.03■■□□□ 1.28
VEGFB-201ENST00000309422 HOMER1Q86YM7 354 aa23.03■■□□□ 1.28
VEGFB-201ENST00000309422 MAML3Q96JK9 1138 aa23.03■■□□□ 1.28
VEGFB-201ENST00000309422 UNC93B1Q9H1C4 597 aa23.03■■□□□ 1.28
VEGFB-201ENST00000309422 MAD2L2Q9UI95 211 aa23.03■■□□□ 1.28
VEGFB-201ENST00000309422 CNPY2Q9Y2B0 182 aa23.03■■□□□ 1.28
VEGFB-201ENST00000309422 COL11A1P12107 1806 aaPredicted RBP23.03■■□□□ 1.28
VEGFB-201ENST00000309422 ABCB11O95342 1321 aa23.03■■□□□ 1.28
VEGFB-201ENST00000309422 PALM3A6NDB9 673 aaPredicted RBP23.02■■□□□ 1.28
VEGFB-201ENST00000309422 GJB1P08034 283 aa23.02■■□□□ 1.28
VEGFB-201ENST00000309422 ADCK5Q3MIX3 580 aa23.02■■□□□ 1.28
VEGFB-201ENST00000309422 SGMS1Q86VZ5 419 aa23.02■■□□□ 1.28
VEGFB-201ENST00000309422 FBXO11Q86XK2 927 aa23.02■■□□□ 1.28
VEGFB-201ENST00000309422 MSL3Q8N5Y2 521 aaKnown RBP23.02■■□□□ 1.28
VEGFB-201ENST00000309422 NPLOC4Q8TAT6 608 aa23.02■■□□□ 1.28
VEGFB-201ENST00000309422 KCNB2Q92953 911 aa23.02■■□□□ 1.28
VEGFB-201ENST00000309422 USP26Q9BXU7 913 aa23.02■■□□□ 1.28
VEGFB-201ENST00000309422 RBM28Q9NW13 759 aaKnown RBP23.02■■□□□ 1.28
VEGFB-201ENST00000309422 PTPDC1A2A3K4 754 aa23.01■■□□□ 1.27
VEGFB-201ENST00000309422 ZBTB43O43298 467 aa23.01■■□□□ 1.27
VEGFB-201ENST00000309422 MSCO60682 206 aa23.01■■□□□ 1.27
VEGFB-201ENST00000309422 COBLO75128 1261 aa23.01■■□□□ 1.27
VEGFB-201ENST00000309422 CNGA1P29973 690 aa23.01■■□□□ 1.27
VEGFB-201ENST00000309422 MCF2L2Q86YR7 1114 aa23.01■■□□□ 1.27
VEGFB-201ENST00000309422 STAG2Q8N3U4 1231 aa23.01■■□□□ 1.27
VEGFB-201ENST00000309422 MYL10Q9BUA6 226 aa23.01■■□□□ 1.27
VEGFB-201ENST00000309422 AMNQ9BXJ7 453 aa23.01■■□□□ 1.27
VEGFB-201ENST00000309422 CPVLQ9H3G5 476 aa23.01■■□□□ 1.27
VEGFB-201ENST00000309422 SENP2Q9HC62 589 aa23.01■■□□□ 1.27
VEGFB-201ENST00000309422 MRPL11Q9Y3B7 192 aaKnown RBP23.01■■□□□ 1.27
VEGFB-201ENST00000309422 CYP46A1Q9Y6A2 500 aa23.01■■□□□ 1.27
VEGFB-201ENST00000309422 HTTP42858 3142 aa23.01■■□□□ 1.27
VEGFB-201ENST00000309422 ZBTB5O15062 677 aa23.01■■□□□ 1.27
VEGFB-201ENST00000309422 QRICH1Q2TAL8 776 aa23.01■■□□□ 1.27
VEGFB-201ENST00000309422 RRP36Q96EU6 259 aaKnown RBP23.01■■□□□ 1.27
VEGFB-201ENST00000309422 TCEANC2Q96MN5 208 aa23.01■■□□□ 1.27
VEGFB-201ENST00000309422 DEFB118Q96PH6 123 aa23.01■■□□□ 1.27
VEGFB-201ENST00000309422 A1CFQ9NQ94 594 aaKnown RBP23.01■■□□□ 1.27
VEGFB-201ENST00000309422 ADD3Q9UEY8 706 aaKnown RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms