RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 CDKL5O76039 1030 aa11.62□□□□□ -0.55
MSRB3-201ENST00000308259 STX17P56962 302 aa11.62□□□□□ -0.55
MSRB3-201ENST00000308259 MYL5Q02045 173 aa11.62□□□□□ -0.55
MSRB3-201ENST00000308259 PROCA1Q8NCQ7 364 aaPredicted RBP11.62□□□□□ -0.55
MSRB3-201ENST00000308259 OXER1Q8TDS5 423 aa11.62□□□□□ -0.55
MSRB3-201ENST00000308259 NAPBQ9H115 298 aa11.62□□□□□ -0.55
MSRB3-201ENST00000308259 EPB41L4AQ9HCS5 686 aaPredicted RBP11.62□□□□□ -0.55
MSRB3-201ENST00000308259 FAM217BQ9NTX9 383 aaPredicted RBP11.62□□□□□ -0.55
MSRB3-201ENST00000308259 hCG_2014768A0A024R1R8 64 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 PRPHP41219 470 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 FMR1Q06787 632 aaKnown RBP eCLIP11.61□□□□□ -0.55
MSRB3-201ENST00000308259 SYCP3Q8IZU3 236 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 ZBTB38Q8NAP3 1195 aaPredicted RBP11.61□□□□□ -0.55
MSRB3-201ENST00000308259 STAMQ92783 540 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.61□□□□□ -0.55
MSRB3-201ENST00000308259 SEC31BQ9NQW1 1179 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 PHRF1Q9P1Y6 1649 aaKnown RBP11.61□□□□□ -0.55
MSRB3-201ENST00000308259 HGSO14964 777 aaPredicted RBP11.61□□□□□ -0.55
MSRB3-201ENST00000308259 TUBB4BP68371 445 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 MAP3K9P80192 1104 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 FILIP1LQ4L180 1135 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 CTNNBL1Q8WYA6 563 aaPredicted RBP11.61□□□□□ -0.55
MSRB3-201ENST00000308259 MAP3K14Q99558 947 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 LY9Q9HBG7 655 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 INTS13Q9NVM9 706 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 L1RE1Q9UN81 338 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 WTIPA6NIX2 430 aaPredicted RBP11.61□□□□□ -0.55
MSRB3-201ENST00000308259 SPATS2Q86XZ4 545 aaKnown RBP11.61□□□□□ -0.55
MSRB3-201ENST00000308259 IGDCC4Q8TDY8 1250 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 SERTAD1Q9UHV2 236 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 LOC102724428A0A0B4J2F2 783 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 LRRIQ3A6PVS8 624 aaPredicted RBP11.61□□□□□ -0.55
MSRB3-201ENST00000308259 MYO1BO43795 1136 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 C21orf2O43822 256 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 RPS6KA5O75582 802 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 PAX3P23760 479 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 AFMP43652 599 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 SIK1P57059 783 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 SLC4A8Q2Y0W8 1093 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 IQCEQ6IPM2 695 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 NLRP10Q86W26 655 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 DIS3L2Q8IYB7 885 aaKnown RBP11.61□□□□□ -0.55
MSRB3-201ENST00000308259 PCDHB6Q9Y5E3 794 aa11.61□□□□□ -0.55
MSRB3-201ENST00000308259 A0A0U1RQJ8 604 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 MINDY4BA8MYZ0 360 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 PCCAP05165 728 aaPredicted RBP11.6□□□□□ -0.55
MSRB3-201ENST00000308259 SMYD4Q8IYR2 804 aaPredicted RBP11.6□□□□□ -0.55
MSRB3-201ENST00000308259 TRIM58Q8NG06 486 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 SAMSN1Q9NSI8 373 aaKnown RBP11.6□□□□□ -0.55
MSRB3-201ENST00000308259 TRPM3Q9HCF6 1732 aaPredicted RBP11.6□□□□□ -0.55
MSRB3-201ENST00000308259 PRDM1O75626 825 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 CNGA1P29973 690 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 SSRP1Q08945 709 aaKnown RBP11.6□□□□□ -0.55
MSRB3-201ENST00000308259 MTF1Q14872 753 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 CFAP58Q5T655 872 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 NCAPH2Q6IBW4 605 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 RINLQ6ZS11 566 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 TOGARAM2Q6ZUX3 1019 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 CCDC47Q96A33 483 aaKnown RBP11.6□□□□□ -0.55
MSRB3-201ENST00000308259 ZBTB1Q9Y2K1 713 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 NWD2Q9ULI1 1742 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 GNAT1P11488 350 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 CTSWP56202 376 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 NTRK3Q16288 839 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 CAVIN4Q5BKX8 364 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 ZC3H12AQ5D1E8 599 aaKnown RBP11.6□□□□□ -0.55
MSRB3-201ENST00000308259 IFNL3Q8IZI9 196 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 SLC35F6Q8N357 371 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 STRBPQ96SI9 672 aaKnown RBP11.6□□□□□ -0.55
MSRB3-201ENST00000308259 OSBPL9Q96SU4 736 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 STK38LQ9Y2H1 464 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 NFE2L3Q9Y4A8 694 aa11.6□□□□□ -0.55
MSRB3-201ENST00000308259 TOB1P50616 345 aaPredicted RBP11.59□□□□□ -0.55
MSRB3-201ENST00000308259 LMNTD2Q8IXW0 634 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 CCDC13Q8IYE1 715 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 TSGA10Q9BZW7 698 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 ABCC6O95255 1503 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 SPATA31A1Q5TZJ5 1347 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 EIF3HO15372 352 aaKnown RBP eCLIP11.59□□□□□ -0.55
MSRB3-201ENST00000308259 BCAMP50895 628 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 MAP7D1Q3KQU3 841 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 RESP18Q5W5W9 173 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 SDR42E1Q8WUS8 393 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 CABP5Q9NP86 173 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 BATF3Q9NR55 127 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 DDX20Q9UHI6 824 aaKnown RBP11.59□□□□□ -0.55
MSRB3-201ENST00000308259 USH1CQ9Y6N9 552 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 RIC1Q4ADV7 1423 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 KIF1AQ12756 1690 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 TRIM37O94972 964 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 PDE8BO95263 885 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 CSF1RP07333 972 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 RASGRF1Q13972 1273 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 CYB5D1Q6P9G0 228 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 LCORLQ8N3X6 602 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 EHBP1Q8NDI1 1231 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.59□□□□□ -0.55
MSRB3-201ENST00000308259 PAPOLBQ9NRJ5 636 aaKnown RBP11.59□□□□□ -0.55
MSRB3-201ENST00000308259 HPSEQ9Y251 543 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 ADAMTS7Q9UKP4 1686 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms