RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 CNGA1P29973 690 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 SYMPKQ92797 1274 aaKnown RBP13.86□□□□□ -0.19
USP38-201ENST00000307017 N4BP2L2Q92802 583 aaPredicted RBP13.86□□□□□ -0.19
USP38-201ENST00000307017 DISC1Q9NRI5 854 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 GYG1P46976 350 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 MIER3Q7Z3K6 550 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 FAM71BQ8TC56 605 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 TEX13AQ9BXU3 409 aaPredicted RBP13.86□□□□□ -0.19
USP38-201ENST00000307017 SPTLC3Q9NUV7 552 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 SETD1BQ9UPS6 1966 aaKnown RBP13.86□□□□□ -0.19
USP38-201ENST00000307017 NCF2P19878 526 aaPredicted RBP13.86□□□□□ -0.19
USP38-201ENST00000307017 KMT5BQ4FZB7 885 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 RFX6Q8HWS3 928 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 SPATA5Q8NB90 893 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 KIF9Q9HAQ2 790 aa13.86□□□□□ -0.19
USP38-201ENST00000307017 MAP3K5Q99683 1374 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.85□□□□□ -0.19
USP38-201ENST00000307017 NAP1L4Q99733 375 aaKnown RBP13.85□□□□□ -0.19
USP38-201ENST00000307017 H0Y3Z8 333 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 H7C0C1 242 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 EEF1B2P24534 225 aaKnown RBP13.85□□□□□ -0.19
USP38-201ENST00000307017 PIK3CAP42336 1068 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 ATP5OP48047 213 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 TMOD4Q9NZQ9 345 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 PPP1R9AQ9ULJ8 1098 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 RILPL1Q5EBL4 403 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 TMTC1Q8IUR5 882 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 CARD10Q9BWT7 1032 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 BTG4Q9NY30 223 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 KDM2BQ8NHM5 1336 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 CAPN9O14815 690 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 KRT10P13645 584 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 SYCP2LQ5T4T6 812 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 RNF40O75150 1001 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 TOM1L1O75674 476 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 BCRP11274 1271 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 BCAMP50895 628 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 INTS4Q96HW7 963 aaKnown RBP13.85□□□□□ -0.19
USP38-201ENST00000307017 GGT7Q9UJ14 662 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 ZNF148Q9UQR1 794 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 TRPC6Q9Y210 931 aa13.85□□□□□ -0.19
USP38-201ENST00000307017 BNIP3LO60238 219 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 TPTE2Q6XPS3 522 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 TRIM50Q86XT4 487 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 GPHNQ9NQX3 736 aaPredicted RBP13.84□□□□□ -0.19
USP38-201ENST00000307017 ARHGAP6O43182 974 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 GTPBP6O43824 516 aaPredicted RBP13.84□□□□□ -0.19
USP38-201ENST00000307017 MKRN4PQ13434 485 aaPredicted RBP13.84□□□□□ -0.19
USP38-201ENST00000307017 VWA3BQ502W6 1294 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 KCTD17Q8N5Z5 321 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 DYDC2Q96IM9 177 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 TRIM56Q9BRZ2 755 aaKnown RBP13.84□□□□□ -0.19
USP38-201ENST00000307017 ADAM33Q9BZ11 813 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 HPS4Q9NQG7 708 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 GRIN2BQ13224 1484 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 GOLGA8SH3BPF8 625 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 GOLGA8MH3BSY2 632 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 HIP1RO75146 1068 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 ATF2P15336 505 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 TRIM14Q14142 442 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 CCDC93Q567U6 631 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 ARHGEF16Q5VV41 709 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 LRGUKQ96M69 825 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 SMYD3Q9H7B4 428 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 SOX11P35716 441 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 MRPL12P52815 198 aaKnown RBP13.84□□□□□ -0.19
USP38-201ENST00000307017 ARPP19P56211 112 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 POLA2Q14181 598 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 KCTD1Q719H9 257 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 LRRC8CQ8TDW0 803 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 GLG1Q92896 1179 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 KRT82Q9NSB4 513 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 TLR7Q9NYK1 1049 aaKnown RBP13.84□□□□□ -0.19
USP38-201ENST00000307017 PUM3Q15397 648 aaKnown RBP13.84□□□□□ -0.19
USP38-201ENST00000307017 MAML1Q92585 1016 aa13.84□□□□□ -0.19
USP38-201ENST00000307017 GNGT2O14610 69 aa13.83□□□□□ -0.19
USP38-201ENST00000307017 SCARA5Q6ZMJ2 495 aa13.83□□□□□ -0.19
USP38-201ENST00000307017 ZBTB33Q86T24 672 aa13.83□□□□□ -0.19
USP38-201ENST00000307017 RASEFQ8IZ41 740 aa13.83□□□□□ -0.19
USP38-201ENST00000307017 PLTPP55058 493 aa13.83□□□□□ -0.2
USP38-201ENST00000307017 NONOQ15233 471 aaKnown RBP eCLIP13.83□□□□□ -0.2
USP38-201ENST00000307017 ADCK5Q3MIX3 580 aa13.83□□□□□ -0.2
USP38-201ENST00000307017 HS1BP3Q53T59 392 aa13.83□□□□□ -0.2
USP38-201ENST00000307017 AFAP1L2Q8N4X5 818 aa13.83□□□□□ -0.2
USP38-201ENST00000307017 JDP2Q8WYK2 163 aa13.83□□□□□ -0.2
USP38-201ENST00000307017 RBM17Q96I25 401 aaKnown RBP13.83□□□□□ -0.2
USP38-201ENST00000307017 FLOT1O75955 427 aa13.83□□□□□ -0.2
USP38-201ENST00000307017 ALAS1P13196 640 aa13.83□□□□□ -0.2
USP38-201ENST00000307017 SLC16A2P36021 539 aa13.83□□□□□ -0.2
USP38-201ENST00000307017 SCRN1Q12765 414 aa13.83□□□□□ -0.2
USP38-201ENST00000307017 MDH1BQ5I0G3 518 aa13.83□□□□□ -0.2
USP38-201ENST00000307017 HAUS3Q68CZ6 603 aa13.83□□□□□ -0.2
USP38-201ENST00000307017 RINLQ6ZS11 566 aa13.83□□□□□ -0.2
USP38-201ENST00000307017 RAPGEF5Q92565 580 aa13.83□□□□□ -0.2
USP38-201ENST00000307017 ZBTB12Q9Y330 459 aaPredicted RBP13.83□□□□□ -0.2
USP38-201ENST00000307017 PI4K2BG5E9Z4 385 aa13.82□□□□□ -0.2
USP38-201ENST00000307017 ALDH1L1O75891 902 aa13.82□□□□□ -0.2
USP38-201ENST00000307017 CASP1P29466 404 aa13.82□□□□□ -0.2
USP38-201ENST00000307017 LINS1Q8NG48 757 aa13.82□□□□□ -0.2
USP38-201ENST00000307017 FAM167BQ9BTA0 163 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms