RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 FBXO40Q9UH90 709 aa12.81□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 CCPG1Q9ULG6 757 aa12.81□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 NAP1L2Q9ULW6 460 aaPredicted RBP12.81□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 HPS5Q9UPZ3 1129 aa12.81□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 CYP46A1Q9Y6A2 500 aa12.81□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 KLRF2D3W0D1 207 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 STRNO43815 780 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 ICAM1P05362 532 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 ALAS1P13196 640 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 CPA1P15085 419 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 CYP2B6P20813 491 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 PTPREP23469 700 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 GRK4P32298 578 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 GNAQP50148 359 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 SNAP25P60880 206 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 EXOSC10Q01780 885 aaKnown RBP12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 TROAPQ12815 778 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 MAP2K5Q13163 448 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 IRF5Q13568 498 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 GRB14Q14449 540 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 KCTD2Q14681 263 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 CDC37Q16543 378 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 Q6ZUG5 572 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 RUFY3Q7L099 469 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 DPP9Q86TI2 863 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 SGMS1Q86VZ5 419 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 CHST13Q8NET6 341 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 MYL10Q9BUA6 226 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 TM6SF1Q9BZW5 370 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 ACAD9Q9H845 621 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 GPHNQ9NQX3 736 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 HOMER2Q9NSB8 354 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 BIN2Q9UBW5 565 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 MAD2L2Q9UI95 211 aa12.8□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 KLF18A0A0U1RQI7 1052 aa12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 PALM3A6NDB9 673 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 ZBTB43O43298 467 aa12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 ADCY3O60266 1144 aa12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 ADORA2AP29274 412 aa12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 UBXN2AP68543 259 aa12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 COL9A3Q14050 684 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 APOA5Q6Q788 366 aa12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 TRMT44Q8IYL2 757 aaKnown RBP12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 ADGRF4Q8IZF3 695 aa12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 ABRAQ8N0Z2 381 aa12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 STAG2Q8N3U4 1231 aa12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 PXYLP1Q8TE99 480 aa12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 ABHD8Q96I13 439 aa12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 AGBL1Q96MI9 1066 aa12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 CPVLQ9H3G5 476 aa12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 RNF146Q9NTX7 359 aa12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 RBM28Q9NW13 759 aaKnown RBP12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 MCM3APO60318 1980 aa12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 ZNF536O15090 1300 aa12.79□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 LCTP09848 1927 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 GOLGA8AA7E2F4 631 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 GOLGA8BA8MQT2 603 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 SEC24BO95487 1268 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 XRCC5P13010 732 aaKnown RBP12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 RXRAP19793 462 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 USH1GQ495M9 461 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 MORN1Q5T089 497 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 RAB11FIP4Q86YS3 637 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 CCDC144CPQ8IYA2 1237 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 ANKRD35Q8N283 1001 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 SH3TC2Q8TF17 1288 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 BRF1Q92994 677 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 DDX11Q96FC9 970 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 TRERF1Q96PN7 1200 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 LZTS2Q9BRK4 669 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 UPF3BQ9BZI7 483 aaKnown RBP12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 ZSWIM6Q9HCJ5 1215 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 VAT1LQ9HCJ6 419 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 GJD2Q9UKL4 321 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 FRMPD3Q5JV73 1810 aa12.78□□□□□ -0.36
CSPG4P1Y-201ENST00000306641 HMGCRP04035 888 aa12.77□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 ELNP15502 786 aa12.77□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 RCAN1P53805 252 aa12.77□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 APOBRQ0VD83 1088 aa12.77□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 TRAF1Q13077 416 aa12.77□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 RTN1Q16799 776 aa12.77□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 QRICH1Q2TAL8 776 aa12.77□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 FBXO11Q86XK2 927 aa12.77□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 HOMER1Q86YM7 354 aa12.77□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 PDRG1Q9NUG6 133 aa12.77□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 SEC63Q9UGP8 760 aaKnown RBP12.77□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 RIPK3Q9Y572 518 aa12.77□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 PFASO15067 1338 aa12.77□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 ABCB11O95342 1321 aa12.77□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 CCDC196A0A1B0GTZ2 297 aa12.76□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 CCDC85CA6NKD9 419 aa12.76□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 METAP2P50579 478 aaKnown RBP eCLIP12.76□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 MFSD14CQ5VZR4 134 aa12.76□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 FBXL16Q8N461 479 aa12.76□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 FANCBQ8NB91 859 aa12.76□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 USP6NLQ92738 828 aa12.76□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 ARMC5Q96C12 935 aa12.76□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 SPZ1Q9BXG8 430 aa12.76□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 AMNQ9BXJ7 453 aa12.76□□□□□ -0.37
CSPG4P1Y-201ENST00000306641 JMJD4Q9H9V9 463 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms