RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 NT5C2P49902 561 aa12.92□□□□□ -0.34
SCG2-201ENST00000305409 UBASH3AP57075 661 aa12.92□□□□□ -0.34
SCG2-201ENST00000305409 TPM4P67936 248 aa12.92□□□□□ -0.34
SCG2-201ENST00000305409 NONOQ15233 471 aaKnown RBP eCLIP12.92□□□□□ -0.34
SCG2-201ENST00000305409 E2F4Q16254 413 aa12.92□□□□□ -0.34
SCG2-201ENST00000305409 SIAH1Q8IUQ4 282 aa12.92□□□□□ -0.34
SCG2-201ENST00000305409 SPICE1Q8N0Z3 855 aa12.92□□□□□ -0.34
SCG2-201ENST00000305409 LRRC15Q8TF66 581 aa12.92□□□□□ -0.34
SCG2-201ENST00000305409 SERPINA10Q9UK55 444 aa12.92□□□□□ -0.34
SCG2-201ENST00000305409 IKBKBO14920 756 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 TECP42680 631 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 BAG6P46379 1132 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 DPYDQ12882 1025 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 ASPRV1Q53RT3 343 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 NT5DC1Q5TFE4 455 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 SH3RF1Q7Z6J0 888 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 POTEDQ86YR6 584 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 REXO1Q8N1G1 1221 aaKnown RBP12.91□□□□□ -0.34
SCG2-201ENST00000305409 IQUBQ8NA54 791 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 DAGLBQ8NCG7 672 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 CSRNP1Q96S65 589 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 IDI2Q9BXS1 227 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 PLIN4Q96Q06 1357 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 SHTN1A0MZ66 631 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 GH2P01242 217 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 GNA11P29992 359 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 TNNI2P48788 182 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 DHX8Q14562 1220 aaKnown RBP12.91□□□□□ -0.34
SCG2-201ENST00000305409 KANK3Q6NY19 840 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 PDXDC2PQ6P474 469 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
SCG2-201ENST00000305409 VEZTQ9HBM0 779 aa12.91□□□□□ -0.34
SCG2-201ENST00000305409 TDP2O95551 362 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 TPM3P06753 285 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 CDK11BP21127 795 aaKnown RBP12.9□□□□□ -0.34
SCG2-201ENST00000305409 STAT6P42226 847 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 SLC1A4P43007 532 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 ICA1Q05084 483 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 CCDC12Q8WUD4 166 aaPredicted RBP12.9□□□□□ -0.34
SCG2-201ENST00000305409 USP27XA6NNY8 438 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 EDIL3O43854 480 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 SKILP12757 684 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 UBA7P41226 1012 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 TXKP42681 527 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 CCDC93Q567U6 631 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 SLFN13Q68D06 897 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 GALNT17Q6IS24 598 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 MIGA2Q7L4E1 593 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 KRT25Q7Z3Z0 450 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 NEK8Q86SG6 692 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 CREBRFQ8IUR6 639 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 SPATA20Q8TB22 786 aa12.9□□□□□ -0.34
SCG2-201ENST00000305409 DHX36Q9H2U1 1008 aaKnown RBP12.9□□□□□ -0.34
SCG2-201ENST00000305409 TRMT1Q9NXH9 659 aaKnown RBP12.9□□□□□ -0.34
SCG2-201ENST00000305409 USP17L15C9J2P7 530 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 USP17L13C9JLJ4 530 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 USP17L11C9JVI0 530 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 USP17L18D6R9N7 530 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 USP17L22D6RA61 530 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 USP17L17D6RBQ6 530 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 USP17L19D6RCP7 530 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 USP17L20D6RJB6 530 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 SLC37A4O43826 429 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 NEMFO60524 1076 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 LONP1P36776 959 aaKnown RBP12.89□□□□□ -0.35
SCG2-201ENST00000305409 ADCY7P51828 1080 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 USP17L24Q0WX57 530 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 IKQ13123 557 aaPredicted RBP12.89□□□□□ -0.35
SCG2-201ENST00000305409 ABCB5Q2M3G0 1257 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 NAALADL2Q58DX5 795 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 ARL6IP4Q66PJ3 421 aaKnown RBP12.89□□□□□ -0.35
SCG2-201ENST00000305409 ARMCX5Q6P1M9 558 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 USP17L6PQ6QN14 398 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 MLKLQ8NB16 471 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 C16orf45Q96MC5 204 aaPredicted RBP12.89□□□□□ -0.35
SCG2-201ENST00000305409 EHD4Q9H223 541 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 INTS13Q9NVM9 706 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 PNMA6FA0A0J9YX94 578 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 RSBN1LQ6PCB5 846 aaPredicted RBP12.89□□□□□ -0.35
SCG2-201ENST00000305409 CCDC84Q86UT8 332 aaPredicted RBP12.89□□□□□ -0.35
SCG2-201ENST00000305409 ELOA2Q8IYF1 753 aaPredicted RBP12.89□□□□□ -0.35
SCG2-201ENST00000305409 GDAQ9Y2T3 454 aa12.89□□□□□ -0.35
SCG2-201ENST00000305409 OR52Z1P0C646 297 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 HDLBPQ00341 1268 aaKnown RBP12.88□□□□□ -0.35
SCG2-201ENST00000305409 RRAGBQ5VZM2 374 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 SUPT20HQ8NEM7 779 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 CCDC17Q96LX7 622 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 MRIQ9BWK5 157 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 KANSL2Q9H9L4 492 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 DISC1Q9NRI5 854 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 SPTLC3Q9NUV7 552 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 CTNND2Q9UQB3 1225 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 COL4A5P29400 1685 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 A0A1W2PRG0 241 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 F5H6K3 240 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 TXLNAP40222 546 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 ECE1P42892 770 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 FKBP1AP62942 108 aaKnown RBP12.88□□□□□ -0.35
SCG2-201ENST00000305409 CCZ1BP86790 482 aa12.88□□□□□ -0.35
SCG2-201ENST00000305409 CCZ1P86791 482 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms