RNA–Protein interactions for RNA: ENST00000296658.3

CMBL-201, Transcript of carboxymethylenebutenolidase homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMBL, Length 2,335 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMBL-201ENST00000296658 TADA3O75528 432 aa16.73■□□□□ 0.27
CMBL-201ENST00000296658 TOGARAM2Q6ZUX3 1019 aa16.73■□□□□ 0.27
CMBL-201ENST00000296658 ZNF771Q7L3S4 317 aaPredicted RBP16.73■□□□□ 0.27
CMBL-201ENST00000296658 IQCA1Q86XH1 822 aa16.73■□□□□ 0.27
CMBL-201ENST00000296658 SMARCE1Q969G3 411 aa16.73■□□□□ 0.27
CMBL-201ENST00000296658 DYNLL2Q96FJ2 89 aa16.73■□□□□ 0.27
CMBL-201ENST00000296658 WDR24Q96S15 920 aa16.73■□□□□ 0.27
CMBL-201ENST00000296658 CSRNP2Q9H175 543 aa16.73■□□□□ 0.27
CMBL-201ENST00000296658 STX10O60499 249 aa16.72■□□□□ 0.27
CMBL-201ENST00000296658 ENTPD3O75355 529 aa16.72■□□□□ 0.27
CMBL-201ENST00000296658 ZNF280AP59817 542 aaPredicted RBP16.72■□□□□ 0.27
CMBL-201ENST00000296658 TROAPQ12815 778 aa16.72■□□□□ 0.27
CMBL-201ENST00000296658 NFIAQ12857 509 aa16.72■□□□□ 0.27
CMBL-201ENST00000296658 ZBED3Q96IU2 234 aaPredicted RBP16.72■□□□□ 0.27
CMBL-201ENST00000296658 CARD6Q9BX69 1037 aa16.72■□□□□ 0.27
CMBL-201ENST00000296658 DHX36Q9H2U1 1008 aaKnown RBP16.72■□□□□ 0.27
CMBL-201ENST00000296658 TDRD3Q9H7E2 651 aaKnown RBP16.72■□□□□ 0.27
CMBL-201ENST00000296658 MKNK2Q9HBH9 465 aa16.72■□□□□ 0.27
CMBL-201ENST00000296658 CABP5Q9NP86 173 aa16.72■□□□□ 0.27
CMBL-201ENST00000296658 FAM198AQ9UFP1 575 aa16.72■□□□□ 0.27
CMBL-201ENST00000296658 CDK11BP21127 795 aaKnown RBP16.71■□□□□ 0.27
CMBL-201ENST00000296658 CDK8P49336 464 aa16.71■□□□□ 0.27
CMBL-201ENST00000296658 AKAP17AQ02040 695 aaKnown RBP16.71■□□□□ 0.27
CMBL-201ENST00000296658 BMS1Q14692 1282 aaKnown RBP16.71■□□□□ 0.27
CMBL-201ENST00000296658 NR1I3Q14994 352 aa16.71■□□□□ 0.27
CMBL-201ENST00000296658 EARS2Q5JPH6 523 aaKnown RBP16.71■□□□□ 0.27
CMBL-201ENST00000296658 FAM177A1Q8N128 213 aaPredicted RBP16.71■□□□□ 0.27
CMBL-201ENST00000296658 UBXN4Q92575 508 aa16.71■□□□□ 0.27
CMBL-201ENST00000296658 SBF1O95248 1867 aa16.71■□□□□ 0.27
CMBL-201ENST00000296658 COL2A1P02458 1487 aaPredicted RBP16.71■□□□□ 0.27
CMBL-201ENST00000296658 A0A087X0B3 334 aa16.71■□□□□ 0.27
CMBL-201ENST00000296658 ZRANB2O95218 330 aaKnown RBP eCLIP16.71■□□□□ 0.27
CMBL-201ENST00000296658 GABPAQ06546 454 aa16.71■□□□□ 0.27
CMBL-201ENST00000296658 ZNF444Q8N0Y2 327 aaPredicted RBP16.71■□□□□ 0.27
CMBL-201ENST00000296658 TRIML1Q8N9V2 468 aa16.71■□□□□ 0.27
CMBL-201ENST00000296658 SRRTQ9BXP5 876 aaKnown RBP16.71■□□□□ 0.27
CMBL-201ENST00000296658 V9GY48 417 aaPredicted RBP16.71■□□□□ 0.27
CMBL-201ENST00000296658 HLA-DOAP06340 250 aa16.7■□□□□ 0.26
CMBL-201ENST00000296658 CCDC178Q5BJE1 867 aa16.7■□□□□ 0.26
CMBL-201ENST00000296658 FKBP1CQ5VVH2 108 aa16.7■□□□□ 0.26
CMBL-201ENST00000296658 APTXQ7Z2E3 356 aaKnown RBP16.7■□□□□ 0.26
CMBL-201ENST00000296658 EHD4Q9H223 541 aa16.7■□□□□ 0.26
CMBL-201ENST00000296658 TCP11L1Q9NUJ3 509 aa16.7■□□□□ 0.26
CMBL-201ENST00000296658 TMOD2Q9NZR1 351 aa16.7■□□□□ 0.26
CMBL-201ENST00000296658 SWAP70Q9UH65 585 aa16.7■□□□□ 0.26
CMBL-201ENST00000296658 TSPY2A6NKD2 308 aa16.7■□□□□ 0.26
CMBL-201ENST00000296658 EFCAB8A8MWE9 144 aa16.7■□□□□ 0.26
CMBL-201ENST00000296658 PNMA6AP0CW24 399 aaPredicted RBP16.7■□□□□ 0.26
CMBL-201ENST00000296658 MAP3K9P80192 1104 aa16.7■□□□□ 0.26
CMBL-201ENST00000296658 TMTC3Q6ZXV5 915 aa16.7■□□□□ 0.26
CMBL-201ENST00000296658 PHF20Q9BVI0 1012 aa16.7■□□□□ 0.26
CMBL-201ENST00000296658 ZNF70Q9UC06 446 aaPredicted RBP16.7■□□□□ 0.26
CMBL-201ENST00000296658 CNTNAP5Q8WYK1 1306 aa16.7■□□□□ 0.26
CMBL-201ENST00000296658 WNT7AO00755 349 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 PRPF3O43395 683 aaKnown RBP16.69■□□□□ 0.26
CMBL-201ENST00000296658 YBX3P16989 372 aaKnown RBP eCLIP16.69■□□□□ 0.268e-7■□□□□ 10.2
CMBL-201ENST00000296658 RASA1P20936 1047 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 PPP2R5BQ15173 497 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 SPDYE2Q495Y8 402 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 NOM1Q5C9Z4 860 aaKnown RBP16.69■□□□□ 0.26
CMBL-201ENST00000296658 MNS1Q8NEH6 495 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 EPSTI1Q96J88 318 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 MYOZ2Q9NPC6 264 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 RBM28Q9NW13 759 aaKnown RBP16.69■□□□□ 0.26
CMBL-201ENST00000296658 DACH1Q9UI36 760 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 A0A1B0GTH6 734 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 DDAH1O94760 285 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 CACNB3P54284 484 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 GNG11P61952 73 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 TFAP4Q01664 338 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 KANK3Q6NY19 840 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 ZFPM1Q8IX07 1006 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 KIFC2Q96AC6 838 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 EPC1Q9H2F5 836 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 SERPINB13Q9UIV8 391 aa16.69■□□□□ 0.26
CMBL-201ENST00000296658 ATRNL1Q5VV63 1379 aa16.68■□□□□ 0.26
CMBL-201ENST00000296658 CD44P16070 742 aaKnown RBP16.68■□□□□ 0.26
CMBL-201ENST00000296658 ERCC5P28715 1186 aaPredicted RBP16.68■□□□□ 0.26
CMBL-201ENST00000296658 KRT2P35908 639 aa16.68■□□□□ 0.26
CMBL-201ENST00000296658 PLA2G4AP47712 749 aa16.68■□□□□ 0.26
CMBL-201ENST00000296658 GMPSP49915 693 aaPredicted RBP16.68■□□□□ 0.26
CMBL-201ENST00000296658 SRBD1Q8N5C6 995 aaKnown RBP16.68■□□□□ 0.26
CMBL-201ENST00000296658 SLC44A5Q8NCS7 719 aa16.68■□□□□ 0.26
CMBL-201ENST00000296658 ANKS1AQ92625 1134 aa16.68■□□□□ 0.26
CMBL-201ENST00000296658 DESI2Q9BSY9 194 aa16.68■□□□□ 0.26
CMBL-201ENST00000296658 CEP131Q9UPN4 1083 aa16.68■□□□□ 0.26
CMBL-201ENST00000296658 ZNF541Q9H0D2 1346 aa16.68■□□□□ 0.26
CMBL-201ENST00000296658 TEX33O43247 280 aa16.68■□□□□ 0.26
CMBL-201ENST00000296658 CASP1P29466 404 aa16.68■□□□□ 0.26
CMBL-201ENST00000296658 MTF1Q14872 753 aa16.68■□□□□ 0.26
CMBL-201ENST00000296658 PI4KBQ9UBF8 816 aa16.68■□□□□ 0.26
CMBL-201ENST00000296658 GJA3Q9Y6H8 435 aa16.68■□□□□ 0.26
CMBL-201ENST00000296658 GOLGA6L9A6NEM1 432 aa16.67■□□□□ 0.26
CMBL-201ENST00000296658 TSPY3P0CV98 308 aa16.67■□□□□ 0.26
CMBL-201ENST00000296658 TSPY8P0CW00 308 aa16.67■□□□□ 0.26
CMBL-201ENST00000296658 CALM1P0DP23 149 aa16.67■□□□□ 0.26
CMBL-201ENST00000296658 CALM2P0DP24 149 aa16.67■□□□□ 0.26
CMBL-201ENST00000296658 CALM3P0DP25 149 aa16.67■□□□□ 0.26
CMBL-201ENST00000296658 XBP1P17861 261 aa16.67■□□□□ 0.26
CMBL-201ENST00000296658 CASQ1P31415 396 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms