RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 IVNS1ABPQ9Y6Y0 642 aa31.36■■■□□ 2.61
SSU72-201ENST00000291386 ICAM1P05362 532 aa31.35■■■□□ 2.61
SSU72-201ENST00000291386 TKFCQ3LXA3 575 aa31.35■■■□□ 2.61
SSU72-201ENST00000291386 WDR78Q5VTH9 848 aa31.35■■■□□ 2.61
SSU72-201ENST00000291386 ADGRF4Q8IZF3 695 aa31.35■■■□□ 2.61
SSU72-201ENST00000291386 RAET1EQ8TD07 263 aa31.35■■■□□ 2.61
SSU72-201ENST00000291386 KIF5BP33176 963 aa31.34■■■□□ 2.61
SSU72-201ENST00000291386 Q6ZUG5 572 aa31.34■■■□□ 2.61
SSU72-201ENST00000291386 CHST13Q8NET6 341 aa31.34■■■□□ 2.61
SSU72-201ENST00000291386 CTCFLQ8NI51 663 aaPredicted RBP31.34■■■□□ 2.61
SSU72-201ENST00000291386 PXYLP1Q8TE99 480 aa31.34■■■□□ 2.61
SSU72-201ENST00000291386 NUP133Q8WUM0 1156 aa31.34■■■□□ 2.61
SSU72-201ENST00000291386 CPVLQ9H3G5 476 aa31.34■■■□□ 2.61
SSU72-201ENST00000291386 HPS5Q9UPZ3 1129 aa31.34■■■□□ 2.61
SSU72-201ENST00000291386 CYP46A1Q9Y6A2 500 aa31.34■■■□□ 2.61
SSU72-201ENST00000291386 XRCC5P13010 732 aaKnown RBP31.33■■■□□ 2.61
SSU72-201ENST00000291386 RCAN1P53805 252 aa31.33■■■□□ 2.61
SSU72-201ENST00000291386 SNAP25P60880 206 aa31.33■■■□□ 2.61
SSU72-201ENST00000291386 MAP2K5Q13163 448 aa31.33■■■□□ 2.61
SSU72-201ENST00000291386 CCDC174Q6PII3 467 aa31.33■■■□□ 2.61
SSU72-201ENST00000291386 APOA5Q6Q788 366 aa31.33■■■□□ 2.61
SSU72-201ENST00000291386 SYNE3Q6ZMZ3 975 aa31.33■■■□□ 2.61
SSU72-201ENST00000291386 AGBL1Q96MI9 1066 aa31.33■■■□□ 2.61
SSU72-201ENST00000291386 MYL10Q9BUA6 226 aa31.33■■■□□ 2.61
SSU72-201ENST00000291386 FBXO40Q9UH90 709 aa31.33■■■□□ 2.61
SSU72-201ENST00000291386 ZNFX1Q9P2E3 1918 aaKnown RBP31.33■■■□□ 2.61
SSU72-201ENST00000291386 SMARCA1P28370 1054 aa31.32■■■□□ 2.6
SSU72-201ENST00000291386 RGS2P41220 211 aa31.32■■■□□ 2.6
SSU72-201ENST00000291386 MTMR8Q96EF0 704 aa31.32■■■□□ 2.6
SSU72-201ENST00000291386 RIOX1Q9H6W3 641 aa31.32■■■□□ 2.6
SSU72-201ENST00000291386 JMJD4Q9H9V9 463 aa31.32■■■□□ 2.6
SSU72-201ENST00000291386 BRPF3Q9ULD4 1205 aa31.32■■■□□ 2.6
SSU72-201ENST00000291386 HOXC6P09630 235 aa31.31■■■□□ 2.6
SSU72-201ENST00000291386 FCER1AP12319 257 aa31.31■■■□□ 2.6
SSU72-201ENST00000291386 FGD1P98174 961 aa31.31■■■□□ 2.6
SSU72-201ENST00000291386 LZTS2Q9BRK4 669 aa31.31■■■□□ 2.6
SSU72-201ENST00000291386 GNAQP50148 359 aa31.3■■■□□ 2.6
SSU72-201ENST00000291386 CDC37Q16543 378 aaPredicted RBP31.3■■■□□ 2.6
SSU72-201ENST00000291386 FANCBQ8NB91 859 aa31.3■■■□□ 2.6
SSU72-201ENST00000291386 SLAIN1Q8ND83 568 aa31.3■■■□□ 2.6
SSU72-201ENST00000291386 CCPG1Q9ULG6 757 aa31.3■■■□□ 2.6
SSU72-201ENST00000291386 SMCHD1A6NHR9 2005 aa31.3■■■□□ 2.6
SSU72-201ENST00000291386 ADCY3O60266 1144 aa31.29■■■□□ 2.6
SSU72-201ENST00000291386 ADORA2AP29274 412 aa31.29■■■□□ 2.6
SSU72-201ENST00000291386 GRK4P32298 578 aa31.29■■■□□ 2.6
SSU72-201ENST00000291386 EVCP57679 992 aa31.29■■■□□ 2.6
SSU72-201ENST00000291386 SLC35G1Q2M3R5 365 aa31.29■■■□□ 2.6
SSU72-201ENST00000291386 BRF1Q92994 677 aa31.29■■■□□ 2.6
SSU72-201ENST00000291386 ARMC5Q96C12 935 aa31.29■■■□□ 2.6
SSU72-201ENST00000291386 ABHD8Q96I13 439 aa31.29■■■□□ 2.6
SSU72-201ENST00000291386 MMP19Q99542 508 aa31.29■■■□□ 2.6
SSU72-201ENST00000291386 APBA2Q99767 749 aa31.29■■■□□ 2.6
SSU72-201ENST00000291386 MYH6P13533 1939 aa31.29■■■□□ 2.6
SSU72-201ENST00000291386 KLF18A0A0U1RQI7 1052 aa31.28■■■□□ 2.6
SSU72-201ENST00000291386 ZBTB43O43298 467 aa31.28■■■□□ 2.6
SSU72-201ENST00000291386 CYP2B6P20813 491 aa31.28■■■□□ 2.6
SSU72-201ENST00000291386 KCTD2Q14681 263 aa31.28■■■□□ 2.6
SSU72-201ENST00000291386 TRMT44Q8IYL2 757 aaKnown RBP31.28■■■□□ 2.6
SSU72-201ENST00000291386 TRERF1Q96PN7 1200 aa31.28■■■□□ 2.6
SSU72-201ENST00000291386 SPZ1Q9BXG8 430 aa31.28■■■□□ 2.6
SSU72-201ENST00000291386 UPF3BQ9BZI7 483 aaKnown RBP31.28■■■□□ 2.6
SSU72-201ENST00000291386 ACAD9Q9H845 621 aa31.28■■■□□ 2.6
SSU72-201ENST00000291386 RNF146Q9NTX7 359 aa31.28■■■□□ 2.6
SSU72-201ENST00000291386 CYTH3O43739 400 aa31.27■■■□□ 2.6
SSU72-201ENST00000291386 ALAS1P13196 640 aa31.27■■■□□ 2.6
SSU72-201ENST00000291386 RXRAP19793 462 aa31.27■■■□□ 2.6
SSU72-201ENST00000291386 PPP2R5BQ15173 497 aa31.27■■■□□ 2.6
SSU72-201ENST00000291386 SLC9C1Q4G0N8 1177 aa31.27■■■□□ 2.6
SSU72-201ENST00000291386 NBPF11Q86T75 865 aa31.27■■■□□ 2.6
SSU72-201ENST00000291386 MICU3Q86XE3 530 aa31.27■■■□□ 2.6
SSU72-201ENST00000291386 ALDH8A1Q9H2A2 487 aaPredicted RBP31.27■■■□□ 2.6
SSU72-201ENST00000291386 VAT1LQ9HCJ6 419 aa31.27■■■□□ 2.6
SSU72-201ENST00000291386 RBM28Q9NW13 759 aaKnown RBP31.27■■■□□ 2.6
SSU72-201ENST00000291386 DHX16O60231 1041 aaKnown RBP31.26■■■□□ 2.59
SSU72-201ENST00000291386 SLC4A3P48751 1232 aa31.26■■■□□ 2.59
SSU72-201ENST00000291386 APOBRQ0VD83 1088 aa31.26■■■□□ 2.59
SSU72-201ENST00000291386 TOB2Q14106 344 aaPredicted RBP31.26■■■□□ 2.59
SSU72-201ENST00000291386 QRICH1Q2TAL8 776 aa31.26■■■□□ 2.59
SSU72-201ENST00000291386 PDRG1Q9NUG6 133 aa31.26■■■□□ 2.59
SSU72-201ENST00000291386 SLC5A4Q9NY91 659 aa31.26■■■□□ 2.59
SSU72-201ENST00000291386 NID2Q14112 1375 aa31.26■■■□□ 2.59
SSU72-201ENST00000291386 ZBTB5O15062 677 aa31.25■■■□□ 2.59
SSU72-201ENST00000291386 DPP9Q86TI2 863 aa31.25■■■□□ 2.59
SSU72-201ENST00000291386 BAZ2BQ9UIF8 2168 aaKnown RBP31.24■■■□□ 2.59
SSU72-201ENST00000291386 COBLO75128 1261 aa31.24■■■□□ 2.59
SSU72-201ENST00000291386 RBM25P49756 843 aaKnown RBP31.24■■■□□ 2.59
SSU72-201ENST00000291386 TMTC3Q6ZXV5 915 aa31.24■■■□□ 2.59
SSU72-201ENST00000291386 RAB11FIP4Q86YS3 637 aa31.24■■■□□ 2.59
SSU72-201ENST00000291386 CCDC144CPQ8IYA2 1237 aa31.24■■■□□ 2.59
SSU72-201ENST00000291386 MAF1Q9H063 256 aa31.24■■■□□ 2.59
SSU72-201ENST00000291386 HOMER2Q9NSB8 354 aa31.24■■■□□ 2.59
SSU72-201ENST00000291386 DIS3Q9Y2L1 958 aaKnown RBP31.24■■■□□ 2.59
SSU72-201ENST00000291386 PLXNA1Q9UIW2 1896 aa31.23■■■□□ 2.59
SSU72-201ENST00000291386 DNAJC25-GNG10A0A024R161 153 aa31.23■■■□□ 2.59
SSU72-201ENST00000291386 IGHA2P01877 340 aa31.23■■■□□ 2.59
SSU72-201ENST00000291386 RTN1Q16799 776 aa31.23■■■□□ 2.59
SSU72-201ENST00000291386 MUM1L1Q5H9M0 696 aa31.23■■■□□ 2.59
SSU72-201ENST00000291386 SRBD1Q8N5C6 995 aaKnown RBP31.23■■■□□ 2.59
SSU72-201ENST00000291386 NPLOC4Q8TAT6 608 aa31.23■■■□□ 2.59
SSU72-201ENST00000291386 ZNF333Q96JL9 665 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms