RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 RRP12Q5JTH9 1297 aaKnown RBP11.28□□□□□ -0.6
HMHB1-201ENST00000289448 TTBK2Q6IQ55 1244 aa11.28□□□□□ -0.6
HMHB1-201ENST00000289448 CCDC174Q6PII3 467 aa11.28□□□□□ -0.6
HMHB1-201ENST00000289448 FAM160B2Q86V87 743 aa11.28□□□□□ -0.6
HMHB1-201ENST00000289448 ANKRD35Q8N283 1001 aa11.28□□□□□ -0.6
HMHB1-201ENST00000289448 MSL3Q8N5Y2 521 aaKnown RBP11.28□□□□□ -0.6
HMHB1-201ENST00000289448 CHST13Q8NET6 341 aa11.28□□□□□ -0.6
HMHB1-201ENST00000289448 CHURC1Q8WUH1 139 aa11.28□□□□□ -0.6
HMHB1-201ENST00000289448 TMEM47Q9BQJ4 181 aa11.28□□□□□ -0.6
HMHB1-201ENST00000289448 TOMM22Q9NS69 142 aa11.28□□□□□ -0.6
HMHB1-201ENST00000289448 PRR12Q9ULL5 1215 aa11.28□□□□□ -0.6
HMHB1-201ENST00000289448 ATP11BQ9Y2G3 1177 aa11.28□□□□□ -0.6
HMHB1-201ENST00000289448 ZMYM6O95789 1325 aa11.28□□□□□ -0.6
HMHB1-201ENST00000289448 SYNGAP1Q96PV0 1343 aa11.28□□□□□ -0.6
HMHB1-201ENST00000289448 ADCY6O43306 1168 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 ADAMTS4O75173 837 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 FDX1P10109 184 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 AKR1A1P14550 325 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 PDE4AP27815 886 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 SLC16A2P36021 539 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 IRX5P78411 483 aaPredicted RBP11.27□□□□□ -0.61
HMHB1-201ENST00000289448 IKQ13123 557 aaPredicted RBP11.27□□□□□ -0.61
HMHB1-201ENST00000289448 SNX17Q15036 470 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 TRIM60Q495X7 471 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 MUM1L1Q5H9M0 696 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 PPP4R3BQ5MIZ7 849 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 AKNAD1Q5T1N1 836 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 CWC27Q6UX04 472 aaKnown RBP11.27□□□□□ -0.61
HMHB1-201ENST00000289448 ZNF467Q7Z7K2 595 aaPredicted RBP11.27□□□□□ -0.61
HMHB1-201ENST00000289448 UBE2OQ9C0C9 1292 aaKnown RBP11.27□□□□□ -0.61
HMHB1-201ENST00000289448 IL25Q9H293 177 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 A1CFQ9NQ94 594 aaKnown RBP11.27□□□□□ -0.61
HMHB1-201ENST00000289448 RNF146Q9NTX7 359 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 TCP11L1Q9NUJ3 509 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.27□□□□□ -0.61
HMHB1-201ENST00000289448 FBXO40Q9UH90 709 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 PHF24Q9UPV7 400 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 CNPY2Q9Y2B0 182 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 DDX49Q9Y6V7 483 aaKnown RBP11.27□□□□□ -0.61
HMHB1-201ENST00000289448 ASTN1O14525 1302 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 PLXNA1Q9UIW2 1896 aa11.27□□□□□ -0.61
HMHB1-201ENST00000289448 MYADML2A6NDP7 307 aa11.26□□□□□ -0.61
HMHB1-201ENST00000289448 SOWAHBA6NEL2 793 aa11.26□□□□□ -0.61
HMHB1-201ENST00000289448 TOP1P11387 765 aaKnown RBP11.26□□□□□ -0.61
HMHB1-201ENST00000289448 IRX6P78412 446 aaPredicted RBP11.26□□□□□ -0.61
HMHB1-201ENST00000289448 ACVR2BQ13705 512 aa11.26□□□□□ -0.61
HMHB1-201ENST00000289448 ARMCX2Q7L311 632 aa11.26□□□□□ -0.61
HMHB1-201ENST00000289448 SH3RF1Q7Z6J0 888 aa11.26□□□□□ -0.61
HMHB1-201ENST00000289448 TDHQ8IZJ6 230 aa11.26□□□□□ -0.61
HMHB1-201ENST00000289448 FAM133AQ8N9E0 248 aa11.26□□□□□ -0.61
HMHB1-201ENST00000289448 DCAF4Q8WV16 495 aa11.26□□□□□ -0.61
HMHB1-201ENST00000289448 TRERF1Q96PN7 1200 aa11.26□□□□□ -0.61
HMHB1-201ENST00000289448 KATNBL1Q9H079 304 aa11.26□□□□□ -0.61
HMHB1-201ENST00000289448 ACAD9Q9H845 621 aa11.26□□□□□ -0.61
HMHB1-201ENST00000289448 ZHX1Q9UKY1 873 aaPredicted RBP11.26□□□□□ -0.61
HMHB1-201ENST00000289448 FAM184BQ9ULE4 1060 aa11.26□□□□□ -0.61
HMHB1-201ENST00000289448 NEDD4P46934 1319 aa11.26□□□□□ -0.61
HMHB1-201ENST00000289448 FRMPD2Q68DX3 1309 aaPredicted RBP11.26□□□□□ -0.61
HMHB1-201ENST00000289448 SYNRGQ9UMZ2 1314 aa11.26□□□□□ -0.61
HMHB1-201ENST00000289448 CDH23Q9H251 3354 aa11.25□□□□□ -0.61
HMHB1-201ENST00000289448 TRIM43BA6NCK2 446 aa11.25□□□□□ -0.61
HMHB1-201ENST00000289448 POTEB2H3BUK9 544 aa11.25□□□□□ -0.61
HMHB1-201ENST00000289448 PDHBP11177 359 aa11.25□□□□□ -0.61
HMHB1-201ENST00000289448 ALAS1P13196 640 aa11.25□□□□□ -0.61
HMHB1-201ENST00000289448 CCDC96Q2M329 555 aa11.25□□□□□ -0.61
HMHB1-201ENST00000289448 TKFCQ3LXA3 575 aa11.25□□□□□ -0.61
HMHB1-201ENST00000289448 CCDC144BQ3MJ40 725 aa11.25□□□□□ -0.61
HMHB1-201ENST00000289448 C1orf53Q5VUE5 145 aa11.25□□□□□ -0.61
HMHB1-201ENST00000289448 CCSAPQ6IQ19 270 aaPredicted RBP11.25□□□□□ -0.61
HMHB1-201ENST00000289448 BTNL9Q6UXG8 535 aa11.25□□□□□ -0.61
HMHB1-201ENST00000289448 MFSD6Q6ZSS7 791 aa11.25□□□□□ -0.61
HMHB1-201ENST00000289448 RNF180Q86T96 592 aa11.25□□□□□ -0.61
HMHB1-201ENST00000289448 CCDC144CPQ8IYA2 1237 aa11.25□□□□□ -0.61
HMHB1-201ENST00000289448 KLHDC9Q8NEP7 349 aa11.25□□□□□ -0.61
HMHB1-201ENST00000289448 TRIM43Q96BQ3 446 aaPredicted RBP11.25□□□□□ -0.61
HMHB1-201ENST00000289448 PURBQ96QR8 312 aaKnown RBP11.25□□□□□ -0.61
HMHB1-201ENST00000289448 ZKSCAN3Q9BRR0 538 aa11.25□□□□□ -0.61
HMHB1-201ENST00000289448 RANBP17Q9H2T7 1088 aaKnown RBP11.25□□□□□ -0.61
HMHB1-201ENST00000289448 GPCPD1Q9NPB8 672 aa11.25□□□□□ -0.61
HMHB1-201ENST00000289448 DIAPH3Q9NSV4 1193 aa11.25□□□□□ -0.61
HMHB1-201ENST00000289448 A0A1W2PQ45 241 aaPredicted RBP11.24□□□□□ -0.61
HMHB1-201ENST00000289448 A0A1W2PQY0 241 aa11.24□□□□□ -0.61
HMHB1-201ENST00000289448 ICAM1P05362 532 aa11.24□□□□□ -0.61
HMHB1-201ENST00000289448 GSPT1P15170 499 aaKnown RBP11.24□□□□□ -0.61
HMHB1-201ENST00000289448 PTGS1P23219 599 aa11.24□□□□□ -0.61
HMHB1-201ENST00000289448 ITGB8P26012 769 aa11.24□□□□□ -0.61
HMHB1-201ENST00000289448 MFAP1P55081 439 aaKnown RBP11.24□□□□□ -0.61
HMHB1-201ENST00000289448 TLE2Q04725 743 aa11.24□□□□□ -0.61
HMHB1-201ENST00000289448 KCNA10Q16322 511 aa11.24□□□□□ -0.61
HMHB1-201ENST00000289448 LRIT3Q3SXY7 679 aa11.24□□□□□ -0.61
HMHB1-201ENST00000289448 SYDE2Q5VT97 1194 aa11.24□□□□□ -0.61
HMHB1-201ENST00000289448 ABHD16BQ9H3Z7 469 aa11.24□□□□□ -0.61
HMHB1-201ENST00000289448 PDLIM7Q9NR12 457 aa11.24□□□□□ -0.61
HMHB1-201ENST00000289448 CYP39A1Q9NYL5 469 aa11.24□□□□□ -0.61
HMHB1-201ENST00000289448 CCPG1Q9ULG6 757 aa11.24□□□□□ -0.61
HMHB1-201ENST00000289448 MCM3APO60318 1980 aa11.24□□□□□ -0.61
HMHB1-201ENST00000289448 CUL9Q8IWT3 2517 aa11.23□□□□□ -0.61
HMHB1-201ENST00000289448 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.23□□□□□ -0.61
HMHB1-201ENST00000289448 ZNF213O14771 459 aa11.23□□□□□ -0.61
HMHB1-201ENST00000289448 CTAGE5O15320 804 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms