RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 NONOQ15233 471 aaKnown RBP eCLIP21.84■■□□□ 1.094e-8■■■□□ 18.6
BRAF-201ENST00000288602 MYRIPQ8NFW9 859 aa21.84■■□□□ 1.09
BRAF-201ENST00000288602 STAT6P42226 847 aa21.84■■□□□ 1.09
BRAF-201ENST00000288602 TBCKQ8TEA7 893 aa21.84■■□□□ 1.09
BRAF-201ENST00000288602 PRIMPOLQ96LW4 560 aa21.84■■□□□ 1.09
BRAF-201ENST00000288602 FAM198AQ9UFP1 575 aa21.84■■□□□ 1.09
BRAF-201ENST00000288602 UTRNP46939 3433 aa21.83■■□□□ 1.09
BRAF-201ENST00000288602 TNS1Q9HBL0 1735 aaKnown RBP21.83■■□□□ 1.09
BRAF-201ENST00000288602 PPP1R3GB7ZBB8 358 aa21.83■■□□□ 1.09
BRAF-201ENST00000288602 SNHG28P0DPA3 235 aa21.83■■□□□ 1.09
BRAF-201ENST00000288602 VSTM4Q8IW00 320 aa21.83■■□□□ 1.09
BRAF-201ENST00000288602 TXLNAP40222 546 aa21.83■■□□□ 1.08
BRAF-201ENST00000288602 ASPRV1Q53RT3 343 aa21.83■■□□□ 1.08
BRAF-201ENST00000288602 KRT25Q7Z3Z0 450 aa21.83■■□□□ 1.08
BRAF-201ENST00000288602 ADGRF4Q8IZF3 695 aa21.83■■□□□ 1.08
BRAF-201ENST00000288602 DISC1Q9NRI5 854 aa21.83■■□□□ 1.08
BRAF-201ENST00000288602 SMARCA1P28370 1054 aa21.82■■□□□ 1.08
BRAF-201ENST00000288602 ERCC5P28715 1186 aaPredicted RBP21.82■■□□□ 1.08
BRAF-201ENST00000288602 CCDC96Q2M329 555 aa21.82■■□□□ 1.08
BRAF-201ENST00000288602 NAALADL2Q58DX5 795 aa21.82■■□□□ 1.08
BRAF-201ENST00000288602 SH3BP5LQ7L8J4 393 aa21.82■■□□□ 1.08
BRAF-201ENST00000288602 REXO1Q8N1G1 1221 aaKnown RBP21.82■■□□□ 1.08
BRAF-201ENST00000288602 CCDC150Q8NCX0 1101 aa21.82■■□□□ 1.08
BRAF-201ENST00000288602 LRRC15Q8TF66 581 aa21.82■■□□□ 1.08
BRAF-201ENST00000288602 JMJD4Q9H9V9 463 aa21.82■■□□□ 1.08
BRAF-201ENST00000288602 MAPK8IP1Q9UQF2 711 aa21.82■■□□□ 1.08
BRAF-201ENST00000288602 C21orf2O43822 256 aa21.82■■□□□ 1.08
BRAF-201ENST00000288602 ZNF543Q08ER8 600 aa21.82■■□□□ 1.08
BRAF-201ENST00000288602 ZNF592Q92610 1267 aa21.82■■□□□ 1.08
BRAF-201ENST00000288602 CTNND2Q9UQB3 1225 aa21.82■■□□□ 1.08
BRAF-201ENST00000288602 SYNRGQ9UMZ2 1314 aa21.82■■□□□ 1.08
BRAF-201ENST00000288602 PPP1R11O60927 126 aaPredicted RBP21.81■■□□□ 1.08
BRAF-201ENST00000288602 UBA7P41226 1012 aa21.81■■□□□ 1.08
BRAF-201ENST00000288602 RRAGBQ5VZM2 374 aa21.81■■□□□ 1.08
BRAF-201ENST00000288602 NEK8Q86SG6 692 aa21.81■■□□□ 1.08
BRAF-201ENST00000288602 RIOK3O14730 519 aaKnown RBP21.81■■□□□ 1.08
BRAF-201ENST00000288602 GTPBP6O43824 516 aaPredicted RBP21.81■■□□□ 1.08
BRAF-201ENST00000288602 CCAR2Q8N163 923 aaKnown RBP21.81■■□□□ 1.08
BRAF-201ENST00000288602 C7orf43Q8WVR3 580 aa21.81■■□□□ 1.08
BRAF-201ENST00000288602 TDRD3Q9H7E2 651 aaKnown RBP21.81■■□□□ 1.08
BRAF-201ENST00000288602 POTEDQ86YR6 584 aa21.8■■□□□ 1.08
BRAF-201ENST00000288602 CNKSR1Q969H4 720 aa21.8■■□□□ 1.08
BRAF-201ENST00000288602 MYH4Q9Y623 1939 aa21.8■■□□□ 1.08
BRAF-201ENST00000288602 USP17L10C9JJH3 530 aa21.8■■□□□ 1.08
BRAF-201ENST00000288602 TECP42680 631 aa21.8■■□□□ 1.08
BRAF-201ENST00000288602 E4F1Q66K89 784 aaPredicted RBP21.8■■□□□ 1.08
BRAF-201ENST00000288602 RGS17Q9UGC6 210 aaPredicted RBP21.8■■□□□ 1.08
BRAF-201ENST00000288602 YDJCA8MPS7 323 aa21.79■■□□□ 1.08
BRAF-201ENST00000288602 MYO1BO43795 1136 aa21.79■■□□□ 1.08
BRAF-201ENST00000288602 OR52Z1P0C646 297 aa21.79■■□□□ 1.08
BRAF-201ENST00000288602 UBE2SQ16763 222 aa21.79■■□□□ 1.08
BRAF-201ENST00000288602 SPATA1Q5VX52 437 aa21.79■■□□□ 1.08
BRAF-201ENST00000288602 POTEAQ6S8J7 498 aa21.79■■□□□ 1.08
BRAF-201ENST00000288602 CAMKK2Q96RR4 588 aa21.79■■□□□ 1.08
BRAF-201ENST00000288602 GDAQ9Y2T3 454 aa21.79■■□□□ 1.08
BRAF-201ENST00000288602 RPN1P04843 607 aaKnown RBP21.79■■□□□ 1.08
BRAF-201ENST00000288602 TEX33O43247 280 aa21.78■■□□□ 1.08
BRAF-201ENST00000288602 GDF11O95390 407 aa21.78■■□□□ 1.08
BRAF-201ENST00000288602 EEF2P13639 858 aaKnown RBP21.78■■□□□ 1.08
BRAF-201ENST00000288602 ADCY7P51828 1080 aa21.78■■□□□ 1.08
BRAF-201ENST00000288602 CERKLQ49MI3 558 aaPredicted RBP21.78■■□□□ 1.08
BRAF-201ENST00000288602 PYM1Q9BRP8 204 aaKnown RBP21.78■■□□□ 1.08
BRAF-201ENST00000288602 EHD4Q9H223 541 aa21.78■■□□□ 1.08
BRAF-201ENST00000288602 STK32BQ9NY57 414 aa21.78■■□□□ 1.08
BRAF-201ENST00000288602 SIPA1L1O43166 1804 aa21.78■■□□□ 1.08
BRAF-201ENST00000288602 PPIP5K2O43314 1243 aa21.78■■□□□ 1.08
BRAF-201ENST00000288602 PI4KBQ9UBF8 816 aa21.78■■□□□ 1.08
BRAF-201ENST00000288602 MYO3BQ8WXR4 1341 aa21.77■■□□□ 1.08
BRAF-201ENST00000288602 LAD1O00515 517 aa21.77■■□□□ 1.08
BRAF-201ENST00000288602 EDIL3O43854 480 aa21.77■■□□□ 1.08
BRAF-201ENST00000288602 TXKP42681 527 aa21.77■■□□□ 1.08
BRAF-201ENST00000288602 PRMT6Q96LA8 375 aaPredicted RBP21.77■■□□□ 1.08
BRAF-201ENST00000288602 PNMA6FA0A0J9YX94 578 aa21.77■■□□□ 1.07
BRAF-201ENST00000288602 TDP2O95551 362 aa21.77■■□□□ 1.07
BRAF-201ENST00000288602 PRPHP41219 470 aa21.77■■□□□ 1.07
BRAF-201ENST00000288602 ADKP55263 362 aaKnown RBP21.77■■□□□ 1.07
BRAF-201ENST00000288602 SEPT2Q15019 361 aa21.77■■□□□ 1.07
BRAF-201ENST00000288602 PTPN14Q15678 1187 aa21.77■■□□□ 1.07
BRAF-201ENST00000288602 CEP135Q66GS9 1140 aa21.77■■□□□ 1.07
BRAF-201ENST00000288602 APTXQ7Z2E3 356 aaKnown RBP21.77■■□□□ 1.07
BRAF-201ENST00000288602 CABP7Q86V35 215 aa21.77■■□□□ 1.07
BRAF-201ENST00000288602 CREBRFQ8IUR6 639 aa21.77■■□□□ 1.07
BRAF-201ENST00000288602 IDI2Q9BXS1 227 aa21.77■■□□□ 1.07
BRAF-201ENST00000288602 DHX36Q9H2U1 1008 aaKnown RBP21.77■■□□□ 1.07
BRAF-201ENST00000288602 ESYT2A0FGR8 921 aa21.76■■□□□ 1.07
BRAF-201ENST00000288602 DYNC1I1O14576 645 aa21.76■■□□□ 1.07
BRAF-201ENST00000288602 SLC37A4O43826 429 aa21.76■■□□□ 1.07
BRAF-201ENST00000288602 PLCG1P19174 1290 aa21.76■■□□□ 1.07
BRAF-201ENST00000288602 TNNI2P48788 182 aa21.76■■□□□ 1.07
BRAF-201ENST00000288602 FAM177A1Q8N128 213 aaPredicted RBP21.76■■□□□ 1.07
BRAF-201ENST00000288602 TRIM34Q9BYJ4 488 aa21.76■■□□□ 1.07
BRAF-201ENST00000288602 DHX8Q14562 1220 aaKnown RBP21.75■■□□□ 1.07
BRAF-201ENST00000288602 NR1I3Q14994 352 aa21.75■■□□□ 1.07
BRAF-201ENST00000288602 NYAP1Q6ZVC0 841 aa21.75■■□□□ 1.07
BRAF-201ENST00000288602 CCDC17Q96LX7 622 aa21.75■■□□□ 1.07
BRAF-201ENST00000288602 MRIQ9BWK5 157 aa21.75■■□□□ 1.07
BRAF-201ENST00000288602 CCSER1Q9C0I3 900 aa21.75■■□□□ 1.07
BRAF-201ENST00000288602 SERPINA10Q9UK55 444 aa21.75■■□□□ 1.07
BRAF-201ENST00000288602 PRCPP42785 496 aa21.75■■□□□ 1.07
BRAF-201ENST00000288602 ZNF658Q5TYW1 1059 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms