RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 C8orf74Q6P047 294 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 PPP1R14CQ8TAE6 165 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 WDR66Q8TBY9 1149 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 ENOX1Q8TC92 643 aaKnown RBP13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 HPS5Q9UPZ3 1129 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 AGLP35573 1532 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 SPATA31D1Q6ZQQ2 1576 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 CYP19A1P11511 503 aaPredicted RBP13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 GNGT1P63211 74 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 MAP3K9P80192 1104 aa13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 REXO1Q8N1G1 1221 aaKnown RBP13.93□□□□□ -0.18
SLC6A1-201ENST00000287766 E7EVH7 732 aa13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 STAMBPO95630 424 aa13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 IFI16Q16666 785 aaKnown RBP13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 HERC4Q5GLZ8 1057 aaPredicted RBP13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 MFSD14BQ5SR56 506 aa13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 LMNTD2Q8IXW0 634 aa13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 ENAHQ8N8S7 591 aaPredicted RBP13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 RGS22Q8NE09 1264 aa13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 ENGASEQ8NFI3 743 aa13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 EPN1Q9Y6I3 576 aaPredicted RBP13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 GTPBP6O43824 516 aaPredicted RBP13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 RPSAP08865 295 aaKnown RBP13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 MAGEA1P43355 309 aa13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 TERF2Q15554 542 aa13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 CALCRLQ16602 461 aa13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 GSDMAQ96QA5 445 aa13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 ZCCHC17Q9NP64 241 aaKnown RBP13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 ARPP21Q9UBL0 812 aaPredicted RBP13.92□□□□□ -0.18
SLC6A1-201ENST00000287766 UBAP1LF5GYI3 381 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 CHMP2AO43633 222 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 GTF2IP78347 998 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 MECOMQ03112 1051 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 SETDB1Q15047 1291 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 OSBPL5Q9H0X9 879 aaPredicted RBP13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 MRPS25P82663 173 aaKnown RBP13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 PPFIA1Q13136 1202 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 CCDC170Q8IYT3 715 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 SLC44A5Q8NCS7 719 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 BAZ2BQ9UIF8 2168 aaKnown RBP13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 ERCC5P28715 1186 aaPredicted RBP13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 CUL4BQ13620 913 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 TTC19Q6DKK2 380 aaPredicted RBP13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 CNNM4Q6P4Q7 775 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 PARD6BQ9BYG5 372 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 TRIM31Q9BZY9 425 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 IKBKGQ9Y6K9 419 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 C1orf167Q5SNV9 1468 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 ZNF804BA4D1E1 1349 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 TRIM49BA6NDI0 452 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 POTEJP0CG39 1038 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 ATP11AP98196 1134 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 CYP27A1Q02318 531 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 FMR1Q06787 632 aaKnown RBP eCLIP13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 TRIM14Q14142 442 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 AP1ARQ63HQ0 302 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 USP17L2Q6R6M4 530 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 IGDCC4Q8TDY8 1250 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 CELF1Q92879 486 aaKnown RBP13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 SECISBP2LQ93073 1101 aaKnown RBP13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 SMC6Q96SB8 1091 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 CCDC77Q9BR77 488 aa13.91□□□□□ -0.18
SLC6A1-201ENST00000287766 RIMS1Q86UR5 1692 aaKnown RBP13.9□□□□□ -0.18
SLC6A1-201ENST00000287766 PP2D1A8MPX8 630 aa13.9□□□□□ -0.18
SLC6A1-201ENST00000287766 USH1GQ495M9 461 aa13.9□□□□□ -0.18
SLC6A1-201ENST00000287766 MIPOL1Q8TD10 442 aa13.9□□□□□ -0.18
SLC6A1-201ENST00000287766 GGA1Q9UJY5 639 aa13.9□□□□□ -0.18
SLC6A1-201ENST00000287766 ZBTB21Q9ULJ3 1066 aa13.9□□□□□ -0.18
SLC6A1-201ENST00000287766 PLCG2P16885 1265 aa13.9□□□□□ -0.18
SLC6A1-201ENST00000287766 SCNN1DP51172 638 aa13.9□□□□□ -0.18
SLC6A1-201ENST00000287766 LRRC41Q15345 812 aa13.9□□□□□ -0.18
SLC6A1-201ENST00000287766 KRT25Q7Z3Z0 450 aa13.9□□□□□ -0.18
SLC6A1-201ENST00000287766 LRRC27Q9C0I9 530 aa13.9□□□□□ -0.18
SLC6A1-201ENST00000287766 SAR1BQ9Y6B6 198 aa13.9□□□□□ -0.18
SLC6A1-201ENST00000287766 SPDYE3A6NKU9 549 aa13.9□□□□□ -0.18
SLC6A1-201ENST00000287766 TNNC1P63316 161 aa13.9□□□□□ -0.18
SLC6A1-201ENST00000287766 BRD3Q15059 726 aa13.9□□□□□ -0.18
SLC6A1-201ENST00000287766 E2F5Q15329 346 aa13.9□□□□□ -0.18
SLC6A1-201ENST00000287766 IFIH1Q9BYX4 1025 aaKnown RBP13.9□□□□□ -0.18
SLC6A1-201ENST00000287766 BUB1O43683 1085 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 ZYXQ15942 572 aaKnown RBP13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 INTS8Q75QN2 995 aaKnown RBP13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 WDR24Q96S15 920 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 EPB41L4AQ9HCS5 686 aaPredicted RBP13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 FAM114A2Q9NRY5 505 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 LMTK3Q96Q04 1460 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 TMEM110-MUSTN1A8MSY1 372 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 ACTN2P35609 894 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 IFT74Q96LB3 600 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 VEZTQ9HBM0 779 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 DDX41Q9UJV9 622 aaKnown RBP13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 RFX7Q2KHR2 1363 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 ERVV-1B6SEH8 477 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 MYO1CO00159 1063 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 KCNQ2O43526 872 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 PNMA6AP0CW24 399 aaPredicted RBP13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 ADCY7P51828 1080 aa13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 MRPL12P52815 198 aaKnown RBP13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 CACNB1Q02641 598 aaPredicted RBP13.89□□□□□ -0.19
SLC6A1-201ENST00000287766 KRT31Q15323 416 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms