RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 TSGA10Q9BZW7 698 aa15.76■□□□□ 0.11
SCARF1-201ENST00000263071 FAM217BQ9NTX9 383 aaPredicted RBP15.76■□□□□ 0.11
SCARF1-201ENST00000263071 RIPOR2Q9Y4F9 1068 aa15.76■□□□□ 0.11
SCARF1-201ENST00000263071 ADGRL3Q9HAR2 1447 aa15.76■□□□□ 0.11
SCARF1-201ENST00000263071 TUBB4BP68371 445 aa15.76■□□□□ 0.11
SCARF1-201ENST00000263071 FANCBQ8NB91 859 aa15.76■□□□□ 0.11
SCARF1-201ENST00000263071 A0A087X0B3 334 aa15.75■□□□□ 0.11
SCARF1-201ENST00000263071 CTAGE9A4FU28 777 aa15.75■□□□□ 0.11
SCARF1-201ENST00000263071 TRIM49BA6NDI0 452 aa15.75■□□□□ 0.11
SCARF1-201ENST00000263071 PPP6R2O75170 966 aa15.75■□□□□ 0.11
SCARF1-201ENST00000263071 RTN3O95197 1032 aaPredicted RBP15.75■□□□□ 0.11
SCARF1-201ENST00000263071 SYF2O95926 243 aaKnown RBP15.75■□□□□ 0.11
SCARF1-201ENST00000263071 TNKSO95271 1327 aa15.75■□□□□ 0.11
SCARF1-201ENST00000263071 RAD21O60216 631 aa15.75■□□□□ 0.11
SCARF1-201ENST00000263071 CTSWP56202 376 aa15.75■□□□□ 0.11
SCARF1-201ENST00000263071 SPATA21Q7Z572 469 aa15.75■□□□□ 0.11
SCARF1-201ENST00000263071 GDAQ9Y2T3 454 aa15.75■□□□□ 0.11
SCARF1-201ENST00000263071 TACC3Q9Y6A5 838 aa15.75■□□□□ 0.11
SCARF1-201ENST00000263071 PYGBP11216 843 aa15.75■□□□□ 0.11
SCARF1-201ENST00000263071 XBP1P17861 261 aa15.75■□□□□ 0.11
SCARF1-201ENST00000263071 GNPTABQ3T906 1256 aa15.75■□□□□ 0.11
SCARF1-201ENST00000263071 IFIT1BQ5T764 474 aaKnown RBP15.75■□□□□ 0.11
SCARF1-201ENST00000263071 DZIP3Q86Y13 1208 aaKnown RBP15.75■□□□□ 0.11
SCARF1-201ENST00000263071 CCDC13Q8IYE1 715 aa15.75■□□□□ 0.11
SCARF1-201ENST00000263071 ZBTB38Q8NAP3 1195 aaPredicted RBP15.75■□□□□ 0.11
SCARF1-201ENST00000263071 MSANTD4Q8NCY6 345 aa15.75■□□□□ 0.11
SCARF1-201ENST00000263071 CDC23Q9UJX2 597 aa15.75■□□□□ 0.11
SCARF1-201ENST00000263071 IL2RBP14784 551 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 GGCXP38435 758 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 TTF1Q15361 905 aaPredicted RBP15.74■□□□□ 0.11
SCARF1-201ENST00000263071 RILPL1Q5EBL4 403 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 WASF1Q92558 559 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 GPKOWQ92917 476 aaPredicted RBP eCLIP15.74■□□□□ 0.11
SCARF1-201ENST00000263071 TMEM87BQ96K49 555 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 VAT1LQ9HCJ6 419 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 HPSEQ9Y251 543 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 NCAPD2Q15021 1401 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 PP2D1A8MPX8 630 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 STX10O60499 249 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 SLC5A1P13866 664 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 PTGDRQ13258 359 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 LRRC23Q53EV4 343 aaPredicted RBP15.74■□□□□ 0.11
SCARF1-201ENST00000263071 MLKLQ8NB16 471 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 SPAG5Q96R06 1193 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 CHP1Q99653 195 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 GPR108Q9NPR9 543 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 JADE2Q9NQC1 790 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 FBXO2Q9UK22 296 aaPredicted RBP15.74■□□□□ 0.11
SCARF1-201ENST00000263071 JCADQ9P266 1359 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 PRPF6O94906 941 aaKnown RBP15.74■□□□□ 0.11
SCARF1-201ENST00000263071 VEGFAP15692 232 aaPredicted RBP15.74■□□□□ 0.11
SCARF1-201ENST00000263071 IFT88Q13099 833 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 NTRK3Q16288 839 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 CDCA2Q69YH5 1023 aaPredicted RBP15.74■□□□□ 0.11
SCARF1-201ENST00000263071 PIGBQ92521 554 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 MED15Q96RN5 788 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 OSBPL9Q96SU4 736 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 BPIFA3Q9BQP9 254 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 CPVLQ9H3G5 476 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 VCPKMTQ9H867 229 aa15.74■□□□□ 0.11
SCARF1-201ENST00000263071 SHOX2O60902 331 aaPredicted RBP15.73■□□□□ 0.11
SCARF1-201ENST00000263071 MYO1EQ12965 1108 aa15.73■□□□□ 0.11
SCARF1-201ENST00000263071 PTPROQ16827 1216 aa15.73■□□□□ 0.11
SCARF1-201ENST00000263071 CYB5D1Q6P9G0 228 aa15.73■□□□□ 0.11
SCARF1-201ENST00000263071 CCDC121Q6ZUS5 278 aa15.73■□□□□ 0.11
SCARF1-201ENST00000263071 NLRP10Q86W26 655 aa15.73■□□□□ 0.11
SCARF1-201ENST00000263071 FCHSD1Q86WN1 690 aa15.73■□□□□ 0.11
SCARF1-201ENST00000263071 NOA1Q8NC60 698 aaKnown RBP15.73■□□□□ 0.11
SCARF1-201ENST00000263071 CCDC148Q8NFR7 591 aa15.73■□□□□ 0.11
SCARF1-201ENST00000263071 TRIM4Q9C037 500 aa15.73■□□□□ 0.11
SCARF1-201ENST00000263071 RGL1Q9NZL6 768 aa15.73■□□□□ 0.11
SCARF1-201ENST00000263071 CIAO1O76071 339 aa15.73■□□□□ 0.11
SCARF1-201ENST00000263071 RNASE9P60153 205 aaKnown RBP15.73■□□□□ 0.11
SCARF1-201ENST00000263071 ZRSR2Q15696 482 aaKnown RBP15.73■□□□□ 0.11
SCARF1-201ENST00000263071 HOOK2Q96ED9 719 aa15.73■□□□□ 0.11
SCARF1-201ENST00000263071 BAIAP2L1Q9UHR4 511 aa15.73■□□□□ 0.11
SCARF1-201ENST00000263071 CYP27A1Q02318 531 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.72■□□□□ 0.11
SCARF1-201ENST00000263071 SOS2Q07890 1332 aaPredicted RBP15.72■□□□□ 0.11
SCARF1-201ENST00000263071 KIF13AQ9H1H9 1805 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 RNF225M0QZC1 329 aaPredicted RBP15.72■□□□□ 0.11
SCARF1-201ENST00000263071 FMNL1O95466 1100 aaPredicted RBP15.72■□□□□ 0.11
SCARF1-201ENST00000263071 OATP04181 439 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 PTPREP23469 700 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 CUL4BQ13620 913 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 RINLQ6ZS11 566 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 NCAPG2Q86XI2 1143 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 ANKRD13CQ8N6S4 541 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 MAB21L3Q8N8X9 362 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 OR8K1Q8NGG5 319 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 NSMCE1Q8WV22 266 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 VIPAS39Q9H9C1 493 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 ADGRG1Q9Y653 693 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 GOLGA6L10A6NI86 522 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 GSG1L2A8MUP6 293 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 DEXIO95424 95 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 PAPOLAP51003 745 aaKnown RBP15.72■□□□□ 0.11
SCARF1-201ENST00000263071 TMEM139Q8IV31 216 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 CRACR2BQ8N4Y2 399 aaPredicted RBP15.72■□□□□ 0.11
SCARF1-201ENST00000263071 PAGE5Q96GU1 130 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms