RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 TMEM260Q9NX78 707 aa16.44■□□□□ 0.22
FOXF1-201ENST00000262426 BIN2Q9UBW5 565 aaPredicted RBP16.44■□□□□ 0.22
FOXF1-201ENST00000262426 PTPREP23469 700 aa16.43■□□□□ 0.22
FOXF1-201ENST00000262426 UVSSAQ2YD98 709 aa16.43■□□□□ 0.22
FOXF1-201ENST00000262426 JAKMIP3Q5VZ66 844 aa16.43■□□□□ 0.22
FOXF1-201ENST00000262426 DHX58Q96C10 678 aa16.43■□□□□ 0.22
FOXF1-201ENST00000262426 CUTAO60888 179 aa16.43■□□□□ 0.22
FOXF1-201ENST00000262426 EGFRP00533 1210 aa16.43■□□□□ 0.22
FOXF1-201ENST00000262426 AFMP43652 599 aa16.43■□□□□ 0.22
FOXF1-201ENST00000262426 AOPEPQ8N6M6 819 aa16.43■□□□□ 0.22
FOXF1-201ENST00000262426 CACTINQ8WUQ7 758 aaKnown RBP16.43■□□□□ 0.22
FOXF1-201ENST00000262426 DRC1Q96MC2 740 aa16.43■□□□□ 0.22
FOXF1-201ENST00000262426 ZNF446Q9NWS9 450 aa16.43■□□□□ 0.22
FOXF1-201ENST00000262426 STXBP3O00186 592 aa16.42■□□□□ 0.22
FOXF1-201ENST00000262426 EEF2P13639 858 aaKnown RBP16.42■□□□□ 0.22
FOXF1-201ENST00000262426 TEX2Q8IWB9 1127 aa16.42■□□□□ 0.22
FOXF1-201ENST00000262426 TTLL1O95922 423 aa16.42■□□□□ 0.22
FOXF1-201ENST00000262426 PTPN21Q16825 1174 aa16.42■□□□□ 0.22
FOXF1-201ENST00000262426 METTL16Q86W50 562 aaKnown RBP16.42■□□□□ 0.22
FOXF1-201ENST00000262426 PIM2Q9P1W9 311 aa16.42■□□□□ 0.22
FOXF1-201ENST00000262426 HPSEQ9Y251 543 aa16.42■□□□□ 0.22
FOXF1-201ENST00000262426 SMCO2A6NFE2 343 aa16.42■□□□□ 0.22
FOXF1-201ENST00000262426 SEC31AO94979 1220 aaKnown RBP16.42■□□□□ 0.22
FOXF1-201ENST00000262426 CCDC144BQ3MJ40 725 aa16.42■□□□□ 0.22
FOXF1-201ENST00000262426 PI4KBQ9UBF8 816 aa16.42■□□□□ 0.22
FOXF1-201ENST00000262426 PP2D1A8MPX8 630 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 BECN2A8MW95 431 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 ZYXQ15942 572 aaKnown RBP16.41■□□□□ 0.22
FOXF1-201ENST00000262426 NBPF9Q3BBW0 867 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 RSBN1LQ6PCB5 846 aaPredicted RBP16.41■□□□□ 0.22
FOXF1-201ENST00000262426 TMEM39BQ9GZU3 492 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 SERPINA10Q9UK55 444 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 PCDHA6Q9UN73 950 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 PCDHA8Q9Y5H6 950 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 CCDC194A0A1B0GVG4 234 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 CXCL9Q07325 125 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 IL17AQ16552 155 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 STX1AQ16623 288 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 RTKN2Q8IZC4 609 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 OGFOD1Q8N543 542 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 SYMPKQ92797 1274 aaKnown RBP16.41■□□□□ 0.22
FOXF1-201ENST00000262426 BARHL2Q9NY43 387 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 SEC63Q9UGP8 760 aaKnown RBP16.41■□□□□ 0.22
FOXF1-201ENST00000262426 PCDHA4Q9UN74 947 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 USP17L10C9JJH3 530 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 GH2P01242 217 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 GNAQP50148 359 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 DLGAP5Q15398 846 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 UPF1Q92900 1129 aaKnown RBP eCLIP16.41■□□□□ 0.22
FOXF1-201ENST00000262426 RRP36Q96EU6 259 aaKnown RBP16.41■□□□□ 0.22
FOXF1-201ENST00000262426 PCDHA5Q9Y5H7 936 aa16.41■□□□□ 0.22
FOXF1-201ENST00000262426 CTAGE5O15320 804 aa16.4■□□□□ 0.22
FOXF1-201ENST00000262426 E2F4Q16254 413 aa16.4■□□□□ 0.22
FOXF1-201ENST00000262426 SUPT20HQ8NEM7 779 aa16.4■□□□□ 0.22
FOXF1-201ENST00000262426 TMEM60Q9H2L4 133 aa16.4■□□□□ 0.22
FOXF1-201ENST00000262426 SRPRBQ9Y5M8 271 aaKnown RBP16.4■□□□□ 0.22
FOXF1-201ENST00000262426 C10orf71Q711Q0 1435 aa16.4■□□□□ 0.22
FOXF1-201ENST00000262426 TULP2O00295 520 aa16.4■□□□□ 0.22
FOXF1-201ENST00000262426 IQCB1Q15051 598 aa16.4■□□□□ 0.22
FOXF1-201ENST00000262426 LETM2Q2VYF4 491 aa16.4■□□□□ 0.22
FOXF1-201ENST00000262426 CCDC178Q5BJE1 867 aa16.4■□□□□ 0.22
FOXF1-201ENST00000262426 GOLGA6L19H0YKK7 550 aa16.4■□□□□ 0.22
FOXF1-201ENST00000262426 RASSF7Q02833 373 aa16.4■□□□□ 0.22
FOXF1-201ENST00000262426 PTPN14Q15678 1187 aa16.4■□□□□ 0.22
FOXF1-201ENST00000262426 ADGRF4Q8IZF3 695 aa16.4■□□□□ 0.22
FOXF1-201ENST00000262426 RASSF4Q9H2L5 321 aa16.4■□□□□ 0.22
FOXF1-201ENST00000262426 DLEC1Q9Y238 1755 aa16.39■□□□□ 0.22
FOXF1-201ENST00000262426 COBLO75128 1261 aa16.39■□□□□ 0.21
FOXF1-201ENST00000262426 UBE2SQ16763 222 aa16.39■□□□□ 0.21
FOXF1-201ENST00000262426 SIAH1Q8IUQ4 282 aa16.39■□□□□ 0.21
FOXF1-201ENST00000262426 NIM1KQ8IY84 436 aa16.39■□□□□ 0.21
FOXF1-201ENST00000262426 FAM177A1Q8N128 213 aaPredicted RBP16.39■□□□□ 0.21
FOXF1-201ENST00000262426 IKQ13123 557 aaPredicted RBP16.39■□□□□ 0.21
FOXF1-201ENST00000262426 DHX40Q8IX18 779 aaKnown RBP16.39■□□□□ 0.21
FOXF1-201ENST00000262426 GJA10Q969M2 543 aa16.39■□□□□ 0.21
FOXF1-201ENST00000262426 IGKV6D-41A0A0C4DH26 115 aa16.39■□□□□ 0.21
FOXF1-201ENST00000262426 SPDYE2BA6NHP3 402 aa16.39■□□□□ 0.21
FOXF1-201ENST00000262426 PPP1R11O60927 126 aaPredicted RBP16.39■□□□□ 0.21
FOXF1-201ENST00000262426 SPDYE6P0CI01 402 aa16.39■□□□□ 0.21
FOXF1-201ENST00000262426 ECE1P42892 770 aa16.39■□□□□ 0.21
FOXF1-201ENST00000262426 DALRD3Q5D0E6 543 aaKnown RBP16.39■□□□□ 0.21
FOXF1-201ENST00000262426 IDI2Q9BXS1 227 aa16.39■□□□□ 0.21
FOXF1-201ENST00000262426 ANO10Q9NW15 660 aa16.39■□□□□ 0.21
FOXF1-201ENST00000262426 ASTN2O75129 1339 aaPredicted RBP16.38■□□□□ 0.21
FOXF1-201ENST00000262426 CC2D2BQ6DHV5 1058 aa16.38■□□□□ 0.21
FOXF1-201ENST00000262426 JMJD4Q9H9V9 463 aa16.38■□□□□ 0.21
FOXF1-201ENST00000262426 SWAP70Q9UH65 585 aa16.38■□□□□ 0.21
FOXF1-201ENST00000262426 CEP131Q9UPN4 1083 aa16.38■□□□□ 0.21
FOXF1-201ENST00000262426 GJA3Q9Y6H8 435 aa16.38■□□□□ 0.21
FOXF1-201ENST00000262426 POLD1P28340 1107 aa16.38■□□□□ 0.21
FOXF1-201ENST00000262426 ICA1Q05084 483 aa16.38■□□□□ 0.21
FOXF1-201ENST00000262426 NLGN2Q8NFZ4 835 aa16.38■□□□□ 0.21
FOXF1-201ENST00000262426 SLC1A4P43007 532 aa16.37■□□□□ 0.21
FOXF1-201ENST00000262426 ABCB5Q2M3G0 1257 aa16.37■□□□□ 0.21
FOXF1-201ENST00000262426 BLZF1Q9H2G9 400 aa16.37■□□□□ 0.21
FOXF1-201ENST00000262426 ZNF70Q9UC06 446 aaPredicted RBP16.37■□□□□ 0.21
FOXF1-201ENST00000262426 FZD1Q9UP38 647 aa16.37■□□□□ 0.21
FOXF1-201ENST00000262426 BMP6P22004 513 aa16.37■□□□□ 0.21
FOXF1-201ENST00000262426 ZNF543Q08ER8 600 aa16.37■□□□□ 0.21
FOXF1-201ENST00000262426 SOGA3Q5TF21 947 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms