RNA–Protein interactions for RNA: ENST00000262067.4

TSPAN13-201, Transcript of tetraspanin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN13, Length 2,093 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-201ENST00000262067 KCNF1Q9H3M0 494 aa27.29■■□□□ 1.96
TSPAN13-201ENST00000262067 TMEM260Q9NX78 707 aa27.29■■□□□ 1.96
TSPAN13-201ENST00000262067 ZNF70Q9UC06 446 aaPredicted RBP27.29■■□□□ 1.96
TSPAN13-201ENST00000262067 MYH4Q9Y623 1939 aa27.29■■□□□ 1.96
TSPAN13-201ENST00000262067 USP17L10C9JJH3 530 aa27.28■■□□□ 1.96
TSPAN13-201ENST00000262067 RAD21O60216 631 aa27.28■■□□□ 1.96
TSPAN13-201ENST00000262067 PPP1R11O60927 126 aaPredicted RBP27.28■■□□□ 1.96
TSPAN13-201ENST00000262067 ICA1Q05084 483 aa27.28■■□□□ 1.96
TSPAN13-201ENST00000262067 REXO1Q8N1G1 1221 aaKnown RBP27.28■■□□□ 1.96
TSPAN13-201ENST00000262067 COL2A1P02458 1487 aaPredicted RBP27.28■■□□□ 1.96
TSPAN13-201ENST00000262067 PTGS1P23219 599 aa27.28■■□□□ 1.96
TSPAN13-201ENST00000262067 RRP1BQ14684 758 aaKnown RBP27.28■■□□□ 1.96
TSPAN13-201ENST00000262067 E2F4Q16254 413 aa27.28■■□□□ 1.96
TSPAN13-201ENST00000262067 CCDC186Q7Z3E2 898 aa27.28■■□□□ 1.96
TSPAN13-201ENST00000262067 CCDC34Q96HJ3 373 aa27.28■■□□□ 1.96
TSPAN13-201ENST00000262067 MORC3Q14149 939 aa27.27■■□□□ 1.96
TSPAN13-201ENST00000262067 LETM2Q2VYF4 491 aa27.27■■□□□ 1.96
TSPAN13-201ENST00000262067 SLFN13Q68D06 897 aa27.27■■□□□ 1.96
TSPAN13-201ENST00000262067 DTHD1Q6ZMT9 781 aa27.27■■□□□ 1.96
TSPAN13-201ENST00000262067 CDC25AP30304 524 aa27.26■■□□□ 1.95
TSPAN13-201ENST00000262067 ADCY7P51828 1080 aa27.26■■□□□ 1.95
TSPAN13-201ENST00000262067 TBCKQ8TEA7 893 aa27.26■■□□□ 1.95
TSPAN13-201ENST00000262067 DCAF4Q8WV16 495 aa27.26■■□□□ 1.95
TSPAN13-201ENST00000262067 MTMR8Q96EF0 704 aa27.26■■□□□ 1.95
TSPAN13-201ENST00000262067 SLC1A4P43007 532 aa27.26■■□□□ 1.95
TSPAN13-201ENST00000262067 TPM4P67936 248 aa27.26■■□□□ 1.95
TSPAN13-201ENST00000262067 NEK8Q86SG6 692 aa27.26■■□□□ 1.95
TSPAN13-201ENST00000262067 IQUBQ8NA54 791 aa27.26■■□□□ 1.95
TSPAN13-201ENST00000262067 HSD3B7Q9H2F3 369 aa27.26■■□□□ 1.95
TSPAN13-201ENST00000262067 ZBTB5O15062 677 aa27.25■■□□□ 1.95
TSPAN13-201ENST00000262067 CCNT1O60563 726 aaKnown RBP27.25■■□□□ 1.95
TSPAN13-201ENST00000262067 GH2P01242 217 aa27.25■■□□□ 1.95
TSPAN13-201ENST00000262067 CASP1P29466 404 aa27.25■■□□□ 1.95
TSPAN13-201ENST00000262067 RBM26Q5T8P6 1007 aaKnown RBP27.25■■□□□ 1.95
TSPAN13-201ENST00000262067 TRIML1Q8N9V2 468 aa27.25■■□□□ 1.95
TSPAN13-201ENST00000262067 LAD1O00515 517 aa27.25■■□□□ 1.95
TSPAN13-201ENST00000262067 SMC2O95347 1197 aa27.25■■□□□ 1.95
TSPAN13-201ENST00000262067 MYL5Q02045 173 aa27.25■■□□□ 1.95
TSPAN13-201ENST00000262067 CXCL9Q07325 125 aa27.25■■□□□ 1.95
TSPAN13-201ENST00000262067 DALRD3Q5D0E6 543 aaKnown RBP27.25■■□□□ 1.95
TSPAN13-201ENST00000262067 POLD1P28340 1107 aa27.24■■□□□ 1.95
TSPAN13-201ENST00000262067 SPDYE2Q495Y8 402 aa27.24■■□□□ 1.95
TSPAN13-201ENST00000262067 PPP1R18Q6NYC8 613 aa27.24■■□□□ 1.95
TSPAN13-201ENST00000262067 CCDC125Q86Z20 511 aa27.24■■□□□ 1.95
TSPAN13-201ENST00000262067 AGBL3Q8NEM8 1001 aa27.24■■□□□ 1.95
TSPAN13-201ENST00000262067 FAM151AQ8WW52 585 aa27.24■■□□□ 1.95
TSPAN13-201ENST00000262067 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.24■■□□□ 1.95
TSPAN13-201ENST00000262067 LMOD1P29536 600 aaPredicted RBP27.23■■□□□ 1.95
TSPAN13-201ENST00000262067 PRPHP41219 470 aa27.23■■□□□ 1.95
TSPAN13-201ENST00000262067 DPYDQ12882 1025 aa27.23■■□□□ 1.95
TSPAN13-201ENST00000262067 CCDC144BQ3MJ40 725 aa27.23■■□□□ 1.95
TSPAN13-201ENST00000262067 PDXDC2PQ6P474 469 aa27.23■■□□□ 1.95
TSPAN13-201ENST00000262067 MLKLQ8NB16 471 aa27.23■■□□□ 1.95
TSPAN13-201ENST00000262067 PYM1Q9BRP8 204 aaKnown RBP27.23■■□□□ 1.95
TSPAN13-201ENST00000262067 MTFR1LQ9H019 292 aa27.23■■□□□ 1.95
TSPAN13-201ENST00000262067 HERC5Q9UII4 1024 aaKnown RBP27.23■■□□□ 1.95
TSPAN13-201ENST00000262067 CNTNAP1P78357 1384 aa27.23■■□□□ 1.95
TSPAN13-201ENST00000262067 F5H6K3 240 aa27.23■■□□□ 1.95
TSPAN13-201ENST00000262067 KLRC3Q07444 240 aa27.23■■□□□ 1.95
TSPAN13-201ENST00000262067 STAMQ92783 540 aa27.23■■□□□ 1.95
TSPAN13-201ENST00000262067 RIC8AQ9NPQ8 531 aa27.23■■□□□ 1.95
TSPAN13-201ENST00000262067 PP2D1A8MPX8 630 aa27.21■■□□□ 1.95
TSPAN13-201ENST00000262067 TXLNAP40222 546 aa27.21■■□□□ 1.95
TSPAN13-201ENST00000262067 KARSQ15046 597 aaKnown RBP27.21■■□□□ 1.95
TSPAN13-201ENST00000262067 GMCL1P1Q8NEA9 526 aa27.21■■□□□ 1.95
TSPAN13-201ENST00000262067 VEZTQ9HBM0 779 aa27.21■■□□□ 1.95
TSPAN13-201ENST00000262067 PPP1R1BQ9UD71 204 aaPredicted RBP27.21■■□□□ 1.95
TSPAN13-201ENST00000262067 NEMFO60524 1076 aa27.21■■□□□ 1.95
TSPAN13-201ENST00000262067 OR52Z1P0C646 297 aa27.21■■□□□ 1.95
TSPAN13-201ENST00000262067 MTMR14Q8NCE2 650 aa27.21■■□□□ 1.95
TSPAN13-201ENST00000262067 MTRQ99707 1265 aa27.21■■□□□ 1.95
TSPAN13-201ENST00000262067 IFNKQ9P0W0 207 aa27.21■■□□□ 1.95
TSPAN13-201ENST00000262067 ATP1A3P13637 1013 aa27.2■■□□□ 1.95
TSPAN13-201ENST00000262067 QRICH1Q2TAL8 776 aa27.2■■□□□ 1.95
TSPAN13-201ENST00000262067 NUP88Q99567 741 aaPredicted RBP27.2■■□□□ 1.95
TSPAN13-201ENST00000262067 XPO4Q9C0E2 1151 aaKnown RBP27.2■■□□□ 1.95
TSPAN13-201ENST00000262067 TAOK3Q9H2K8 898 aa27.2■■□□□ 1.95
TSPAN13-201ENST00000262067 EDIL3O43854 480 aa27.2■■□□□ 1.94
TSPAN13-201ENST00000262067 NDUFB10O96000 172 aa27.2■■□□□ 1.94
TSPAN13-201ENST00000262067 UBE2SQ16763 222 aa27.2■■□□□ 1.94
TSPAN13-201ENST00000262067 DACH1Q9UI36 760 aa27.2■■□□□ 1.94
TSPAN13-201ENST00000262067 PYCARDQ9ULZ3 195 aa27.2■■□□□ 1.94
TSPAN13-201ENST00000262067 FMR1Q06787 632 aaKnown RBP eCLIP27.19■■□□□ 1.94
TSPAN13-201ENST00000262067 GSDMAQ96QA5 445 aa27.19■■□□□ 1.94
TSPAN13-201ENST00000262067 FANCLQ9NW38 375 aa27.19■■□□□ 1.94
TSPAN13-201ENST00000262067 A0A1W2PRG0 241 aa27.18■■□□□ 1.94
TSPAN13-201ENST00000262067 FANCCQ00597 558 aa27.18■■□□□ 1.94
TSPAN13-201ENST00000262067 CIAPIN1Q6FI81 312 aa27.18■■□□□ 1.94
TSPAN13-201ENST00000262067 CUL5Q93034 780 aa27.18■■□□□ 1.94
TSPAN13-201ENST00000262067 GMCL1Q96IK5 515 aa27.18■■□□□ 1.94
TSPAN13-201ENST00000262067 BLZF1Q9H2G9 400 aa27.18■■□□□ 1.94
TSPAN13-201ENST00000262067 DISC1Q9NRI5 854 aa27.18■■□□□ 1.94
TSPAN13-201ENST00000262067 UBA7P41226 1012 aa27.18■■□□□ 1.94
TSPAN13-201ENST00000262067 CLK2P49760 499 aaKnown RBP27.18■■□□□ 1.94
TSPAN13-201ENST00000262067 ORC2Q13416 577 aaPredicted RBP27.18■■□□□ 1.94
TSPAN13-201ENST00000262067 FKBP1CQ5VVH2 108 aa27.18■■□□□ 1.94
TSPAN13-201ENST00000262067 CDAN1Q8IWY9 1227 aa27.18■■□□□ 1.94
TSPAN13-201ENST00000262067 C17orf53Q8N3J3 647 aaPredicted RBP27.18■■□□□ 1.94
TSPAN13-201ENST00000262067 ZBED3Q96IU2 234 aaPredicted RBP27.18■■□□□ 1.94
TSPAN13-201ENST00000262067 CCSER1Q9C0I3 900 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms